RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 CDC25BP30305 580 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 GSDMDP57764 484 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 MCM6Q14566 821 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 GADL1Q6ZQY3 521 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 RBM43Q6ZSC3 357 aaKnown RBP13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 PHACTR2O75167 634 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 BMP15O95972 392 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 CYP2C19P33261 490 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 KIAA1755Q5JYT7 1200 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 GALNT17Q6IS24 598 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 TEPSINQ96N21 525 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 ZMYND12Q9H0C1 365 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 ELP3Q9H9T3 547 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 RAVER2Q9HCJ3 691 aaKnown RBP13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 PKD2L1Q9P0L9 805 aa13.15□□□□□ -0.3
TNFAIP1-201ENST00000226225 CMA1P23946 247 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 TECP42680 631 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 TPM4P67936 248 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 DESI2Q9BSY9 194 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 RPAP3Q9H6T3 665 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 SHC4Q6S5L8 630 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 SARM1Q6SZW1 724 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 CTAGE5O15320 804 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 PPP6R2O75170 966 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 UBASH3AP57075 661 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 SCYL3Q8IZE3 742 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 ZBED3Q96IU2 234 aaPredicted RBP13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 RSPH14Q9UHP6 348 aa13.14□□□□□ -0.31
TNFAIP1-201ENST00000226225 IQCA1LA6NCM1 817 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 TBC1D12O60347 775 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 GMCL1P1Q8NEA9 526 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 SYMPKQ92797 1274 aaKnown RBP13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 GJA10Q969M2 543 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 MYH1P12882 1939 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 PPP1R11O60927 126 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 H2AFXP16104 143 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 FANCCQ00597 558 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 PTPAQ15257 358 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 AGBL1Q96MI9 1066 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 PAGR1Q9BTK6 254 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 PLEKHA4Q9H4M7 779 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 PUF60Q9UHX1 559 aaKnown RBP13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 ZBED4O75132 1171 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 TDP2O95551 362 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 MMP14P50281 582 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 CALCRLQ16602 461 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 PRR16Q569H4 304 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 CPLX3Q8WVH0 158 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 SERTAD1Q9UHV2 236 aa13.13□□□□□ -0.31
TNFAIP1-201ENST00000226225 PP2D1A8MPX8 630 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 SASH3O75995 380 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 PTPREP23469 700 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 USP14P54578 494 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 PNOCQ13519 176 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 SMC1AQ14683 1233 aaKnown RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 TMEM266Q2M3C6 531 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 AXDND1Q5T1B0 1012 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 PRPF38AQ8NAV1 312 aaKnown RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 SLF1Q9BQI6 1058 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 RNF216Q9NWF9 866 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 PLIN4Q96Q06 1357 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 GLTPD2A6NH11 291 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 ADKP55263 362 aaKnown RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 NPY5RQ15761 445 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 LONRF3Q496Y0 759 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 TBC1D5Q92609 795 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 IRX2Q9BZI1 471 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 RRAGCQ9HB90 399 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 KIAA1468Q9P260 1216 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 FEZ2Q9UHY8 353 aaPredicted RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 SRPRBQ9Y5M8 271 aaKnown RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 LTBP1Q14766 1721 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 SMARCA1P28370 1054 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 TRAPPC10P48553 1259 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 MAP3K9P80192 1104 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 KLHL10Q6JEL2 608 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 LDHDQ86WU2 507 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 TMEM60Q9H2L4 133 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 TCEAL9Q9UHQ7 104 aa13.12□□□□□ -0.31
TNFAIP1-201ENST00000226225 NID2Q14112 1375 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 CAVIN2O95810 425 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 PTPRAP18433 802 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 VCAM1P19320 739 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 STAT6P42226 847 aa13.11□□□□□ -0.31
TNFAIP1-201ENST00000226225 FMR1Q06787 632 aaKnown RBP eCLIP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms