RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 LENG1Q96BZ8 264 aaPredicted RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 ZFP91Q96JP5 570 aaPredicted RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 ABHD16BQ9H3Z7 469 aa16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 PXMP2Q9NR77 195 aa16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 MAP3K20Q9NYL2 800 aaKnown RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 RBBP6Q7Z6E9 1792 aaKnown RBP16.58■□□□□ 0.24
SUPT4H1-201ENST00000225504 SMCO2A6NFE2 343 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 SEPT4O43236 478 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 TFRCP02786 760 aaKnown RBP16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 FDPSP14324 419 aaKnown RBP16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 PTGS1P23219 599 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 EDNRBP24530 442 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 CCDC144BQ3MJ40 725 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 ARHGEF16Q5VV41 709 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 TAPT1Q6NXT6 567 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 FBXO16Q8IX29 292 aaPredicted RBP16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 IL31RAQ8NI17 732 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 CRISPLD2Q9H0B8 497 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 DDX20Q9UHI6 824 aaKnown RBP16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 NRBP1Q9UHY1 535 aa16.57■□□□□ 0.24
SUPT4H1-201ENST00000225504 BRCA2P51587 3418 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 PIK3CDO00329 1044 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 NR3C2P08235 984 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 PDE4DQ08499 809 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 CPLX2Q6PUV4 134 aaKnown RBP16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 CCDC83Q8IWF9 413 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 TRIM22Q8IYM9 498 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 PDCD2LQ9BRP1 358 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 RIC8AQ9NPQ8 531 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 TMEM260Q9NX78 707 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
SUPT4H1-201ENST00000225504 JAK2O60674 1132 aa16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 ADCYAP1R1P41586 468 aa16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 IRX5P78411 483 aaPredicted RBP16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 NSUN7Q8NE18 718 aaKnown RBP16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 CUL5Q93034 780 aa16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 GJB4Q9NTQ9 266 aa16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 FAM184BQ9ULE4 1060 aa16.55■□□□□ 0.24
SUPT4H1-201ENST00000225504 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 hCG_1984214I3L0E3 225 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 ST18O60284 1047 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 DEXIO95424 95 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 MYCLP12524 364 aaPredicted RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 MNX1P50219 401 aaPredicted RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 ADCY7P51828 1080 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 MRPL12P52815 198 aaKnown RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 PGM5Q15124 567 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 PPP1R18Q6NYC8 613 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 ZNF713Q8N859 430 aaPredicted RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 ZSCAN31Q96LW9 406 aaPredicted RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 IWS1Q96ST2 819 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 ORC3Q9UBD5 711 aaPredicted RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 OGDHLQ9ULD0 1010 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 CDKL5O76039 1030 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 STXBP2Q15833 593 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 GJC2Q5T442 439 aaPredicted RBP16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 ZMYND12Q9H0C1 365 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 VTA1Q9NP79 307 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 PCDHA6Q9UN73 950 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 PCDHA8Q9Y5H6 950 aa16.54■□□□□ 0.24
SUPT4H1-201ENST00000225504 LRRC37A2A6NM11 1700 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 RBM47A0AV96 593 aaKnown RBP16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 RGS20O76081 388 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 PGK1P00558 417 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 AKR1A1P14550 325 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 SMPD1P17405 629 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 CLK2P49760 499 aaKnown RBP16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 MRPS9P82933 396 aaKnown RBP16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 TNFAIP2Q03169 654 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 IQSEC1Q6DN90 963 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 SEPT14Q6ZU15 432 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 TMX3Q96JJ7 454 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 KCNJ14Q9UNX9 436 aa16.53■□□□□ 0.24
SUPT4H1-201ENST00000225504 FRMPD4Q14CM0 1322 aa16.52■□□□□ 0.24
SUPT4H1-201ENST00000225504 STK36Q9NRP7 1315 aa16.52■□□□□ 0.24
SUPT4H1-201ENST00000225504 ESYT2A0FGR8 921 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 B4DLN1 442 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 ARIH2O95376 493 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 JAKMIP3Q5VZ66 844 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 RASGRP4Q8TDF6 673 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 WDR11Q9BZH6 1224 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 C6orf50Q9HD87 102 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 SH3GLB2Q9NR46 395 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 SH2B1Q9NRF2 756 aaPredicted RBP16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.23
SUPT4H1-201ENST00000225504 MSCO60682 206 aa16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 MYCNP04198 464 aaPredicted RBP16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 RARBP10826 455 aa16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 NLRP5P59047 1200 aa16.51■□□□□ 0.23
SUPT4H1-201ENST00000225504 NPY5RQ15761 445 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms