RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 SOWAHBA6NEL2 793 aa31.14■■■□□ 2.58
CHMP4B-201ENST00000217402 EIF2AK2P19525 551 aaKnown RBP31.14■■■□□ 2.58
CHMP4B-201ENST00000217402 NOSTRINQ8IVI9 506 aa31.14■■■□□ 2.58
CHMP4B-201ENST00000217402 GJD2Q9UKL4 321 aa31.14■■■□□ 2.58
CHMP4B-201ENST00000217402 ASTN1O14525 1302 aa31.14■■■□□ 2.57
CHMP4B-201ENST00000217402 U2AF2P26368 475 aaKnown RBP eCLIP31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 PRKCZQ05513 592 aa31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 ZNF792Q3KQV3 632 aa31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 ARHGEF16Q5VV41 709 aa31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 MCTP2Q6DN12 878 aa31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 GABRQQ9UN88 632 aa31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 ZSCAN22P10073 491 aaPredicted RBP31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 HSPA8P11142 646 aaKnown RBP31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 PDIA4P13667 645 aaKnown RBP31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 FGD4Q96M96 766 aa31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 PXMP2Q9NR77 195 aa31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 ADD3Q9UEY8 706 aaKnown RBP31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 DDX49Q9Y6V7 483 aaKnown RBP31.13■■■□□ 2.57
CHMP4B-201ENST00000217402 DOCK3Q8IZD9 2030 aa31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 ZNFX1Q9P2E3 1918 aaKnown RBP31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 CYP2B6P20813 491 aa31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 RGS2P41220 211 aa31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 NONOQ15233 471 aaKnown RBP eCLIP31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 NSUN6Q8TEA1 469 aaKnown RBP31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 USP6NLQ92738 828 aa31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 EHMT1Q9H9B1 1298 aa31.12■■■□□ 2.57
CHMP4B-201ENST00000217402 FLT3LGP49771 235 aa31.11■■■□□ 2.57
CHMP4B-201ENST00000217402 ALDH5A1P51649 535 aaPredicted RBP31.11■■■□□ 2.57
CHMP4B-201ENST00000217402 INF2Q27J81 1249 aa31.11■■■□□ 2.57
CHMP4B-201ENST00000217402 DNERQ8NFT8 737 aa31.11■■■□□ 2.57
CHMP4B-201ENST00000217402 NPLOC4Q8TAT6 608 aa31.11■■■□□ 2.57
CHMP4B-201ENST00000217402 SLC5A4Q9NY91 659 aa31.11■■■□□ 2.57
CHMP4B-201ENST00000217402 RPTORQ8N122 1335 aa31.11■■■□□ 2.57
CHMP4B-201ENST00000217402 RESTQ13127 1097 aa31.1■■■□□ 2.57
CHMP4B-201ENST00000217402 IL31RAQ8NI17 732 aa31.1■■■□□ 2.57
CHMP4B-201ENST00000217402 TBCKQ8TEA7 893 aa31.1■■■□□ 2.57
CHMP4B-201ENST00000217402 APBA2Q99767 749 aa31.1■■■□□ 2.57
CHMP4B-201ENST00000217402 ZDHHC9Q9Y397 364 aa31.1■■■□□ 2.57
CHMP4B-201ENST00000217402 BRD1O95696 1058 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 ARHGEF6Q15052 776 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 PDCD2LQ9BRP1 358 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 FRMPD4Q14CM0 1322 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 F13A1P00488 732 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 HOXD10P28358 340 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 SREBF1P36956 1147 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 PGM5Q15124 567 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 MAML3Q96JK9 1138 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 SRRDQ9UH36 339 aa31.09■■■□□ 2.57
CHMP4B-201ENST00000217402 CTCFP49711 727 aaPredicted RBP31.08■■■□□ 2.57
CHMP4B-201ENST00000217402 LBX1P52954 281 aa31.08■■■□□ 2.57
CHMP4B-201ENST00000217402 ARHGAP4P98171 946 aa31.08■■■□□ 2.57
CHMP4B-201ENST00000217402 PLXNA1Q9UIW2 1896 aa31.08■■■□□ 2.57
CHMP4B-201ENST00000217402 GNRH1P01148 92 aa31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 HOXC6P09630 235 aa31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 MYCLP12524 364 aaPredicted RBP31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 NUCB2P80303 420 aa31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 BRAPQ7Z569 592 aa31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 ZFP91Q96JP5 570 aaPredicted RBP31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 CIZ1Q9ULV3 898 aaPredicted RBP31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 DIS3Q9Y2L1 958 aaKnown RBP31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 TRIM17Q9Y577 477 aa31.07■■■□□ 2.56
CHMP4B-201ENST00000217402 CCL14Q16627 93 aa31.06■■■□□ 2.56
CHMP4B-201ENST00000217402 NR3C2P08235 984 aa31.06■■■□□ 2.56
CHMP4B-201ENST00000217402 ATP2B1P20020 1258 aa31.06■■■□□ 2.56
CHMP4B-201ENST00000217402 FAM173BQ6P4H8 233 aa31.06■■■□□ 2.56
CHMP4B-201ENST00000217402 ZSCAN16Q9H4T2 348 aaPredicted RBP31.06■■■□□ 2.56
CHMP4B-201ENST00000217402 OTOP1Q7RTM1 612 aa31.05■■■□□ 2.56
CHMP4B-201ENST00000217402 NEK8Q86SG6 692 aa31.05■■■□□ 2.56
CHMP4B-201ENST00000217402 IWS1Q96ST2 819 aa31.05■■■□□ 2.56
CHMP4B-201ENST00000217402 FLRT1Q9NZU1 646 aa31.05■■■□□ 2.56
CHMP4B-201ENST00000217402 CHMP5Q9NZZ3 219 aa31.05■■■□□ 2.56
CHMP4B-201ENST00000217402 CCND2P30279 289 aa31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 PDE4DQ08499 809 aa31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 LETM2Q2VYF4 491 aa31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 FOXD4L6Q3SYB3 417 aaPredicted RBP31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 PCNX4Q63HM2 1172 aa31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 FOXD4L3Q6VB84 417 aaPredicted RBP31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 ZNF467Q7Z7K2 595 aaPredicted RBP31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 CRYGNQ8WXF5 182 aa31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 MPHOSPH6Q99547 160 aaKnown RBP31.04■■■□□ 2.56
CHMP4B-201ENST00000217402 ASB14A6NK59 587 aa31.03■■■□□ 2.56
CHMP4B-201ENST00000217402 ARMCX2Q7L311 632 aa31.03■■■□□ 2.56
CHMP4B-201ENST00000217402 NOL7Q9UMY1 257 aaKnown RBP31.03■■■□□ 2.56
CHMP4B-201ENST00000217402 MYH7BA7E2Y1 1941 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 CASP8AP2Q9UKL3 1982 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 XRCC5P13010 732 aaKnown RBP31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 EDNRBP24530 442 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 MYSM1Q5VVJ2 828 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 RAET1EQ8TD07 263 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 B4DLN1 442 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 WNT7AO00755 349 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 EDIL3O43854 480 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 ZNF76P36508 570 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 MRPS9P82933 396 aaKnown RBP31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 NBR1Q14596 966 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 VSIG10LQ86VR7 867 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 TINF2Q9BSI4 451 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 RTEL1Q9NZ71 1219 aa31.02■■■□□ 2.56
CHMP4B-201ENST00000217402 STXBP2Q15833 593 aa31.01■■■□□ 2.55
CHMP4B-201ENST00000217402 EEPD1Q7L9B9 569 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms