RNA–Protein interactions for RNA: ENST00000216288.11

MARK3-201, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-201ENST00000216288 SND1Q7KZF4 910 aaKnown RBP eCLIP13.63□□□□□ -0.23
MARK3-201ENST00000216288 SECISBP2LQ93073 1101 aaKnown RBP13.63□□□□□ -0.23
MARK3-201ENST00000216288 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
MARK3-201ENST00000216288 PODXL2Q9NZ53 605 aa13.63□□□□□ -0.23
MARK3-201ENST00000216288 PSMD14O00487 310 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 ACTN2P35609 894 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 CT47A1Q5JQC4 288 aaPredicted RBP13.62□□□□□ -0.23
MARK3-201ENST00000216288 TMED8Q6PL24 325 aaPredicted RBP13.62□□□□□ -0.23
MARK3-201ENST00000216288 REXO1Q8N1G1 1221 aaKnown RBP13.62□□□□□ -0.23
MARK3-201ENST00000216288 TTYH3Q9C0H2 523 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
MARK3-201ENST00000216288 MYO1CO00159 1063 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 KRT83P78385 493 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 GRB10Q13322 594 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 CALCRLQ16602 461 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 SNX29Q8TEQ0 813 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
MARK3-201ENST00000216288 SELENOOQ9BVL4 669 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 CCSER1Q9C0I3 900 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 BCAS3Q9H6U6 928 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 BLOC1S4Q9NUP1 217 aa13.62□□□□□ -0.23
MARK3-201ENST00000216288 BAG3O95817 575 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
MARK3-201ENST00000216288 KIF11P52732 1056 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 ZBED6P86452 979 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 MFSD14BQ5SR56 506 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 KCTD1Q719H9 257 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 NDST4Q9H3R1 872 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 C6orf50Q9HD87 102 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 CCNL1Q9UK58 526 aaPredicted RBP13.61□□□□□ -0.23
MARK3-201ENST00000216288 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
MARK3-201ENST00000216288 SLC1A4P43007 532 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 SCNN1DP51172 638 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 GPSM2P81274 684 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 TRADDQ15628 312 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 KCTD16Q68DU8 428 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 SV2BQ7L1I2 683 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 CACNA2D4Q7Z3S7 1137 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 PNMA5Q96PV4 448 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 ANKRD2Q9GZV1 360 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 HPCAL4Q9UM19 191 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 PCDHA13Q9Y5I0 950 aa13.61□□□□□ -0.23
MARK3-201ENST00000216288 C6orf229H3BNL8 230 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 POTEB2H3BUK9 544 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 FTCDO95954 541 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 CACNB3P54284 484 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 KCNB1Q14721 858 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 DDX12PQ92771 950 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.6□□□□□ -0.23
MARK3-201ENST00000216288 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 DPP8Q6V1X1 898 aaPredicted RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 ZMYND12Q9H0C1 365 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 NARFQ9UHQ1 456 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 ABCA3Q99758 1704 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 NHSL1Q5SYE7 1610 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 PLCH1Q4KWH8 1693 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 A0A1W2PQC6 194 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 E9PMD0 336 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 TRAF5O00463 557 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 RFC4P35249 363 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 STAT3P40763 770 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 LRRC31Q6UY01 552 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 MTMR8Q96EF0 704 aa13.6□□□□□ -0.23
MARK3-201ENST00000216288 DHTKD1Q96HY7 919 aaPredicted RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 PYM1Q9BRP8 204 aaKnown RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 RRP15Q9Y3B9 282 aaKnown RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
MARK3-201ENST00000216288 KDM4FA0A1W2PPD8 638 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L15C9J2P7 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L13C9JLJ4 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L11C9JVI0 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L18D6R9N7 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L22D6RA61 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L17D6RBQ6 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L19D6RCP7 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L20D6RJB6 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 EDIL3O43854 480 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 AKR1B1P15121 316 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 MAGEA1P43355 309 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 GNAQP50148 359 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 GTF2IP78347 998 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L24Q0WX57 530 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 MEA1Q16626 185 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 SPTY2D1Q68D10 685 aaPredicted RBP13.59□□□□□ -0.23
MARK3-201ENST00000216288 USP17L6PQ6QN14 398 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 CREG2Q8IUH2 290 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 GOLGA5Q8TBA6 731 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 IFT81Q8WYA0 676 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 LARP4BQ92615 738 aaKnown RBP13.59□□□□□ -0.23
MARK3-201ENST00000216288 MYO1AQ9UBC5 1043 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 MEIS1O00470 390 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 CCDC181Q5TID7 509 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 PAPD7Q5XG87 772 aaKnown RBP13.59□□□□□ -0.23
MARK3-201ENST00000216288 SMARCC1Q92922 1105 aaPredicted RBP13.59□□□□□ -0.23
MARK3-201ENST00000216288 NGLY1Q96IV0 654 aa13.59□□□□□ -0.23
MARK3-201ENST00000216288 BICDL2A1A5D9 508 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms