RNA–Protein interactions for RNA: ENST00000022615.8

VDAC3-201, Transcript of voltage dependent anion channel 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VDAC3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-201ENST00000022615 GTF2F1P35269 517 aaKnown RBP eCLIP6.87□□□□□ -1.31
VDAC3-201ENST00000022615 EMP3P54852 163 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 DEFB103AP81534 67 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 CHAF1AQ13111 956 aaPredicted RBP6.87□□□□□ -1.31
VDAC3-201ENST00000022615 NFE2L2Q16236 605 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 SLFNL1Q499Z3 407 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 CC2D1BQ5T0F9 858 aaKnown RBP6.87□□□□□ -1.31
VDAC3-201ENST00000022615 LBX2Q6XYB7 198 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 ANKMY2Q8IV38 441 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 PCSK9Q8NBP7 692 aaKnown RBP6.87□□□□□ -1.31
VDAC3-201ENST00000022615 KREMEN2Q8NCW0 462 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 GIPC2Q8TF65 315 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 IDI2Q9BXS1 227 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 AS3MTQ9HBK9 375 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 TSPYL4Q9UJ04 414 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 SUGT1Q9Y2Z0 365 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 TANC1Q9C0D5 1861 aa6.87□□□□□ -1.31
VDAC3-201ENST00000022615 TMEM8BA6NDV4 472 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 CTAGE5O15320 804 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 NPR3P17342 541 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 CDK11BP21127 795 aaKnown RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 RFC2P35250 354 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 CAP2P40123 477 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 COASYQ13057 564 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 DDX10Q13206 875 aaKnown RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 ADAM15Q13444 863 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 KMT5BQ4FZB7 885 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 EPC2Q52LR7 807 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 DMRTA1Q5VZB9 504 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 ZC3H14Q6PJT7 736 aaKnown RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 LAPTM4BQ86VI4 370 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 DEPDC4Q8N2C3 294 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 FAM163AQ96GL9 167 aaPredicted RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 UPF3AQ9H1J1 476 aaKnown RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 SMOC2Q9H3U7 446 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 INCENPQ9NQS7 918 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 USP40Q9NVE5 1235 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 CLEC1BQ9P126 229 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 NCDNQ9UBB6 729 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 SEPT9Q9UHD8 586 aaPredicted RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 EGFL7Q9UHF1 273 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 IQSEC3Q9UPP2 1182 aaPredicted RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 USP15Q9Y4E8 981 aaPredicted RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 GPSM3Q9Y4H4 160 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 KIF16BQ96L93 1317 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 MYO10Q9HD67 2058 aa6.86□□□□□ -1.31
VDAC3-201ENST00000022615 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
VDAC3-201ENST00000022615 C19orf81C9J6K1 198 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 DUSP11O75319 330 aaKnown RBP6.85□□□□□ -1.31
VDAC3-201ENST00000022615 CSF1RP07333 972 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 C6orf222P0C671 652 aaPredicted RBP6.85□□□□□ -1.31
VDAC3-201ENST00000022615 KCNJ6P48051 423 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 SERPINB4P48594 390 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 GPM6BQ13491 265 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 NCOA4Q13772 614 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 MAP7D1Q3KQU3 841 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 FBXO33Q7Z6M2 555 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 ZNF687Q8N1G0 1237 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 FAM174AQ8TBP5 190 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 NETO1Q8TDF5 533 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 TINF2Q9BSI4 451 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 MOV10L1Q9BXT6 1211 aaKnown RBP6.85□□□□□ -1.31
VDAC3-201ENST00000022615 MFSD1Q9H3U5 465 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 PARD6AQ9NPB6 346 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 SLC5A4Q9NY91 659 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 VPS9D1Q9Y2B5 631 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 RELNP78509 3460 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 ZNFX1Q9P2E3 1918 aaKnown RBP6.85□□□□□ -1.31
VDAC3-201ENST00000022615 ITPR3Q14573 2671 aa6.85□□□□□ -1.31
VDAC3-201ENST00000022615 ANKRD33BA6NCL7 494 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 ADCY6O43306 1168 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 ATF7P17544 494 aaPredicted RBP6.84□□□□□ -1.31
VDAC3-201ENST00000022615 PPP2R1AP30153 589 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 ATP1A2P50993 1020 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 GJA9P57773 515 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 SRSF1Q07955 248 aaKnown RBP eCLIP6.84□□□□□ -1.31
VDAC3-201ENST00000022615 MTMR3Q13615 1198 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 KRT24Q2M2I5 525 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 ZBTB33Q86T24 672 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 PDZD3Q86UT5 571 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 TRIM50Q86XT4 487 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 NPAS4Q8IUM7 802 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 ZSCAN29Q8IWY8 852 aaPredicted RBP6.84□□□□□ -1.31
VDAC3-201ENST00000022615 ABRAQ8N0Z2 381 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 SHCBP1Q8NEM2 672 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 RIN2Q8WYP3 895 aaPredicted RBP6.84□□□□□ -1.31
VDAC3-201ENST00000022615 SUSD6Q92537 303 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 PLA2G12BQ9BX93 195 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 DDX4Q9NQI0 724 aaKnown RBP6.84□□□□□ -1.31
VDAC3-201ENST00000022615 CEP126Q9P2H0 1117 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 SORCS3Q9UPU3 1222 aa6.84□□□□□ -1.31
VDAC3-201ENST00000022615 COL12A1Q99715 3063 aa6.84□□□□□ -1.32
VDAC3-201ENST00000022615 SPTAN1Q13813 2472 aaKnown RBP6.84□□□□□ -1.32
VDAC3-201ENST00000022615 SP9P0CG40 484 aa6.83□□□□□ -1.32
VDAC3-201ENST00000022615 NKX3-2P78367 333 aa6.83□□□□□ -1.32
VDAC3-201ENST00000022615 JAG1P78504 1218 aa6.83□□□□□ -1.32
VDAC3-201ENST00000022615 ITGA7Q13683 1181 aa6.83□□□□□ -1.32
VDAC3-201ENST00000022615 UBE4AQ14139 1066 aa6.83□□□□□ -1.32
VDAC3-201ENST00000022615 EML3Q32P44 896 aa6.83□□□□□ -1.32
VDAC3-201ENST00000022615 GNASQ5JWF2 1037 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms