RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Cd3dP04235 173 aa17.48■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 ClgnP52194 611 aa17.48■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Mapk4Q6P5G0 583 aa17.48■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Stx12Q9ER00 274 aa17.48■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Serpinb6eI7HJI3 429 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Pja2Q80U04 707 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Trim56Q80VI1 734 aaKnown RBP17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 VmacQ8BP01 174 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Mettl24Q8CCB5 363 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Znf467Q8JZL0 594 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Fbxo3Q9DC63 480 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 DeptorQ570Y9 409 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Atp2a3Q64518 1038 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Zfp341Q6PGC9 846 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Dnm3Q8BZ98 863 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Kbtbd13Q8C828 458 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Rabgap1A2AWA9 1064 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Copb1Q9JIF7 953 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 AK157302I3ITR1 129 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Tph1P17532 447 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Trappc10Q3TLI0 1259 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Qrich1Q3UA37 777 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Rgl1Q60695 768 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Rint1Q8BZ36 792 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Isca1Q9D924 129 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Angptl3Q9R182 455 aa17.47■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Gucy2fQ5SDA5 1108 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Trpc6Q61143 930 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Plcg2Q8CIH5 1265 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Tom1l1Q923U0 474 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Homer2Q9QWW1 354 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Vti1aO89116 217 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Krt12Q64291 487 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Mei4Q8BRM6 389 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Mfap3Q922T2 349 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Nhej1Q3KNJ2 295 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Cd209bQ8CJ91 325 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Glrx3Q9CQM9 337 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Iqgap1Q9JKF1 1657 aaKnown RBP17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Cog7Q3UM29 770 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Fkbp3Q62446 224 aaKnown RBP17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Dnajb7Q9QYI8 312 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 Bnip3lQ9Z2F7 218 aa17.46■□□□□ 0.39
Pcdh1-203ENSMUST00000160721 IghaA0A0A6YXW6 389 aa17.46■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Snap25P60879 206 aa17.46■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Chrna5Q2MKA5 467 aa17.46■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Ccdc124Q9D8X2 217 aaKnown RBP17.46■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Ror2Q9Z138 944 aa17.46■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Axin2O88566 840 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 NxnP97346 435 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Sv2cQ69ZS6 727 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Atp1a1Q8VDN2 1023 aaKnown RBP17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Tecpr2Q3UH45 1423 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Cnga4Q3UW12 575 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Slc44a1Q6X893 653 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Mei1Q9D4I2 1268 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Kcnb2A6H8H5 907 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 PhbP67778 272 aaKnown RBP17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Gm10488Q4KL05 212 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Gm14819Q62478 212 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Krt87Q6IMF0 495 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Ptrh1Q8BW00 204 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Grem2O88273 168 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 CopeO89079 308 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 IvlP48997 467 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Polr2fP61219 127 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Ubxn2bQ0KL01 331 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Nxf7Q80SZ6 620 aaKnown RBP17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Efcab14Q8BGQ6 484 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Wbp11Q923D5 641 aaKnown RBP17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Ppil4Q9CXG3 492 aaKnown RBP17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Q9DAQ4 598 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 H2-OaQ9QWV1 250 aa17.45■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Traf5P70191 558 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Cdk8Q8R3L8 464 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Atp5c1Q91VR2 298 aaKnown RBP17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Add2Q9QYB8 725 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 CaluO35887 315 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 MybP06876 636 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Kmt5aQ2YDW7 349 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Ccdc125Q5U465 500 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 NntQ61941 1086 aaKnown RBP17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Glis3Q6XP49 780 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 MefvQ9JJ26 767 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Cyth1Q9QX11 398 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Myo3bQ1EG27 1305 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 NeblQ0II04 452 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Foxd4Q60688 444 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Dzip3Q7TPV2 1204 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Adgra1Q8C4G9 578 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 MlxiplQ99MZ3 864 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Slc17a8Q8BFU8 601 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Kcnv2Q8CFS6 562 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Drc3Q9D5E4 523 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Pex3Q9QXY9 372 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Gpaa1Q9WTK3 621 aa17.44■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Ubn2Q80WC1 1314 aa17.43■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Apol11aE9PZG0 334 aa17.43■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 Nr1i2O54915 431 aa17.43■□□□□ 0.38
Pcdh1-203ENSMUST00000160721 H2afzP0C0S6 128 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms