RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Ces1Q8VCC2 565 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pdzd4Q9QY39 772 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 ClgnP52194 611 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Mier3Q3UHF3 551 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cog7Q3UM29 770 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cyp7b1Q60991 507 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 SrlQ7TQ48 910 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Zkscan3Q91VW9 553 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ube3bQ9ES34 1070 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Add2Q9QYB8 725 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tmem232Q5K6N0 675 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cyp4x1Q6A152 507 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 CalcbQ99MP3 130 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Irx5Q9JKQ4 484 aa12.74□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Lrrc74aA0A1Y7VMD6 494 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pramel3A2AHA7 463 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm7903A2AWL1 463 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 AV320801A2AWL3 467 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cyp3a57D3YYZ0 503 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm15023L7MUB4 467 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Arl1P61211 181 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cyth2P63034 400 aaKnown RBP12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 SbdsP70122 250 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Hipk4Q3V016 616 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 KhnynQ80U38 671 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Rimbp2Q80U40 1072 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Kirrel3Q8BR86 778 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 CoasyQ9DBL7 563 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ndst4Q9EQW8 872 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Dnajb7Q9QYI8 312 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Uggt2E9Q4X2 1504 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Krt90E9Q1Z0 538 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Xrcc5P27641 732 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Lig1P37913 916 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Palb2Q3U0P1 1104 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gas7Q60780 421 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Rhpn1Q61085 643 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Kif21bQ9QXL1 1668 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Med23Q80YQ2 1367 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Abca16E9PWJ7 1678 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Kif14L0N7N1 1674 aaKnown RBP12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gcc2Q8CHG3 1679 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Gm11549A0A286YD83 63 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 MagohP61327 146 aaKnown RBP12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Dab2P98078 766 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ksr1Q61097 873 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Olfr118Q7TRJ6 321 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Usp15Q8R5H1 981 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ivns1abpQ920Q8 642 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 MagohbQ9CQL1 146 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Slc12a7Q9WVL3 1083 aa12.73□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Atp2c2A7L9Z8 944 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cdk4P30285 303 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 HpdP49429 393 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Lzts1P60853 599 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 S100a5P63084 93 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tbc1d30Q69ZT9 766 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pus7lQ8CE46 702 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Bbs5Q9CZQ9 341 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 ArpinQ9D0A3 226 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cdhr2E9Q7P9 1308 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Plch2A2AP18 1501 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Arhgap42B2RQE8 841 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Lrriq3Q14DL3 633 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Crybg3Q80W49 1005 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ttc26Q8BS45 554 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Bpifb6Q8BU51 449 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Krt5Q922U2 580 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Smc6Q924W5 1097 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cttnbp2nlQ99LJ0 638 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Thap12Q9CUX1 758 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 RabggtaQ9JHK4 567 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Myo3aQ8K3H5 1613 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Map3k4O08648 1597 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 TxkP42682 527 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Eepd1Q3TGW2 569 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Swap70Q6A028 585 aaKnown RBP12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Pank4Q80YV4 820 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Zfp449Q8CB76 518 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tor1aip1Q921T2 595 aaKnown RBP12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Igsf1Q7TQA1 1317 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Kcnk16G5E845 292 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Stk10O55098 966 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cd3dP04235 173 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Grin1P35438 938 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Smad1P70340 465 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Meis3P97368 378 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tsen34Q8BMZ5 316 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Ints9Q8K114 658 aaKnown RBP12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Lzts2Q91YU6 671 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Trmt112Q9DCG9 125 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Tmod4Q9JLH8 345 aa12.72□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cep85lA0A1W2P884 806 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Idh1O88844 414 aaKnown RBP12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Hcls1P49710 486 aaKnown RBP12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Cep126Q0VBV7 1103 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 BC051142Q3V0M8 400 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Slc38a10Q5I012 1090 aa12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Jade1Q6ZPI0 834 aaKnown RBP12.71□□□□□ -0.37
Ndc1-204ENSMUST00000139560 Usp44Q8C2S0 711 aa12.71□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms