RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Fam173bQ9D1Z3 247 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Znf638Q61464 1960 aaKnown RBP11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Scgb2b11A0A087WR49 112 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Snx12O70493 165 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Fhdc1Q3ULZ2 1149 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 BcrQ6PAJ1 1270 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Rasa4Q6PFQ7 802 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ccdc43Q9CR29 222 aaKnown RBP11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 EhhadhQ9DBM2 718 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Peg12Q9WVA7 283 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Myh15E9Q264 1925 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Myh4Q5SX39 1939 aa11.93□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Mtcl1Q3UHU5 1945 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm21083A0A0G2JFD5 256 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm21149A0A0G2JFY7 255 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Speer4cG3UXD1 256 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Speer4eK7N6S8 255 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gm17019K7N6W5 255 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Prl2c3P04768 224 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Phactr1Q2M3X8 580 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Fam107bQ3TGF2 131 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Sec31aQ3UPL0 1230 aaKnown RBP11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Kdm7aQ3UWM4 940 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Mdh1bQ5F204 500 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Vipas39Q8BGQ1 491 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Rufy1Q8BIJ7 712 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Vps37cQ8R105 352 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Zfp853A0A1D5RM95 733 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Cpsf2O35218 782 aaKnown RBP11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 ChkbO55229 394 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Nr5a1P33242 462 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 NeblQ0II04 452 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Chrna5Q2MKA5 467 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Klra9Q2TJJ8 266 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Tmtc2Q56A06 836 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Hdac4Q6NZM9 1076 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Rasgrp4Q8BTM9 673 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gimap7Q8R379 293 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Erlin1Q91X78 346 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Abhd2Q9QXM0 425 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Klra10Q9R1G6 266 aa11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Orc1Q9Z1N2 840 aaKnown RBP11.92□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Parp1P11103 1013 aaKnown RBP11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Hmgb2P30681 210 aaKnown RBP11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Mars2Q499X9 586 aaKnown RBP11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ccdc42Q5SV66 316 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Cdcp1Q5U462 833 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Sema4bQ62179 823 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ces3aQ63880 571 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Papd7Q6PB75 542 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 GypcQ78HU7 95 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Baiap3Q80TT2 1134 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 RadxQ8C779 850 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 LgsnQ8CIX8 563 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ces3bQ8VCU1 571 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 ThegQ9JMB1 375 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gpaa1Q9WTK3 621 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Proca1B0QZF7 307 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Tcp10bE9PYJ0 438 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Usp53P15975 1069 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Surf6P70279 355 aaKnown RBP11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Irx1P81068 480 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ccdc122Q8BVN0 290 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Fermt2Q8CIB5 680 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Usp15Q8R5H1 981 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Q9CYI0 393 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Gdf11Q9Z1W4 405 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Aox3G3X982 1335 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ifnar1P33896 590 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Jade2Q6ZQF7 829 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 F13a1Q8BH61 732 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Tmem134Q8R0J4 195 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 NsmfQ99NF2 532 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 4930550L24RikQ99PA7 320 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Scrn1Q9CZC8 414 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Mss51Q9D5Z5 446 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Pex3Q9QXY9 372 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Dnajc7Q9QYI3 494 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ubxn8Q9QZ49 277 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Slfn1Q9Z0I7 337 aa11.91□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Heg1E9Q7X6 1337 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Pfkfb3A7UAK5 555 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Fam186bD3Z420 943 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Slc39a2G3X943 309 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Stim2P83093 746 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Zfp781Q0P5U5 243 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Trappc10Q3TLI0 1259 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Serpinb6dQ3UWK8 375 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Glg1Q61543 1175 aaKnown RBP11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Slc13a4Q8BZ82 625 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Eps8l1Q8R5F8 716 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Rab3il1Q8VDV3 383 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Q91WD4 421 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 CutaQ9CQ89 177 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Akr1e2Q9DCT1 301 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 E9QMW4 1145 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ighmbp2P40694 993 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Ccdc51Q3URS9 406 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Kdm1aQ6ZQ88 853 aa11.9□□□□□ -0.5
Prpf40b-202ENSMUST00000118287 Aggf1Q7TN31 711 aa11.9□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms