RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Gm3043K7N693 218 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm16440K7N6G6 218 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm2244L7N2A3 218 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Vmn2r68L7N2B3 851 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm3278L7N2D2 218 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm8271L7N2E2 218 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cyp26a1O55127 497 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tpp1O89023 562 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 RcvrnP34057 202 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gspt2Q149F3 632 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cyfip2Q5SQX6 1253 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Git1Q68FF6 770 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Krt74Q6IFZ9 495 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kiaa1328Q6NZK5 612 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 PicalmQ7M6Y3 660 aaKnown RBP9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cnot10Q8BH15 744 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cwf19l1Q8CI33 537 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Aipl1Q924K1 328 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cfap53Q9D439 514 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Abt1Q9QYL7 269 aaKnown RBP9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gm1993A6X8I0 212 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cyp3a57D3YYZ0 503 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 SlxD3Z347 212 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Mx1P09922 631 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 PparaP23204 468 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 E330017A01RikQ8BU47 192 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Psma7Q9Z2U0 248 aa9.69□□□□□ -0.86
Col28a1-201ENSMUST00000115537 4932429P05RikA2ADI4 785 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Pdzrn4E9PUZ9 1014 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccng2O08918 344 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kif5aP33175 1027 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Eya3P97480 510 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Camsap3Q80VC9 1252 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ranbp6Q8BIV3 1105 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccdc122Q8BVN0 290 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Lrrd1Q8C0R9 853 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Bst2Q8R2Q8 172 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Golga1Q9CW79 758 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Knop1Q9Z2Q2 478 aaKnown RBP9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Col16a1Q8BLX7 1580 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccdc6D3YZP9 469 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Vmn2r23E9PXI5 849 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Pcdhb9E9Q5G2 828 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Psmd14O35593 310 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gbp1Q01514 589 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Rhpn1Q61085 643 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Nlrp9bQ66X22 1003 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Dync1li2Q6PDL0 492 aaKnown RBP9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Clec16aQ80U30 1036 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Csrnp2Q8BGQ2 534 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Mb21d2Q8C525 428 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 3830403N18RikQ9D6C3 208 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 CsadQ9DBE0 493 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Slc40a1Q9JHI9 570 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Krt71Q9R0H5 524 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 D1Pas1P16381 660 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Sap30bpQ02614 308 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 RubcnlQ3TD16 648 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Oxr1Q4KMM3 866 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Gucy2fQ5SDA5 1108 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Caps2Q8BUG5 550 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Rtn1Q8K0T0 780 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 IqcdQ9D3V1 458 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cxcl11Q9JHH5 100 aa9.68□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Nova2D3YVV7 556 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Api5O35841 504 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 GnaqP21279 359 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Exosc10P56960 887 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Pfkfb2P70265 519 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Fam196bQ6GQV1 535 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Il27raO70394 623 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tmod1P49813 359 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Tmprss11aQ3UQ41 389 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Phactr4Q501J7 694 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 A1cfQ5YD48 595 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Dpp8Q80YA7 892 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Alg1Q921Q3 482 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Cfap57Q9D180 1249 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ddx20Q9JJY4 825 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Prdm2A2A7B5 1709 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Otud7bB2RUR8 840 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 DnttP09838 530 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Chmp6P0C0A3 200 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Hcls1P49710 486 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ttf2Q5NC05 1138 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Psen2Q61144 448 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Haus6Q6NV99 933 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 LdhdQ7TNG8 484 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Bola3Q8CEI1 110 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Lsm14bQ8CGC4 385 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Apopt1Q9CQW7 192 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Mageb16Q9CWV4 363 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ercc4Q9QZD4 917 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kif1aP33173 1695 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 FscbA1EGX6 1074 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 EnahQ03173 802 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Kcnb1Q03717 857 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccdc110Q3V125 848 aa9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Nlrp2Q4PLS0 1046 aaKnown RBP9.67□□□□□ -0.86
Col28a1-201ENSMUST00000115537 Ccdc25Q78PG9 208 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 24.1 ms