RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Dcaf8Q8N7N5 591 aa13.91□□□□□ -0.18
Lig3-202ENSMUST00000080461 Tdrd3Q91W18 743 aaKnown RBP13.91□□□□□ -0.18
Lig3-202ENSMUST00000080461 BaatQ91X34 420 aa13.91□□□□□ -0.18
Lig3-202ENSMUST00000080461 Git2Q9JLQ2 708 aa13.91□□□□□ -0.18
Lig3-202ENSMUST00000080461 C87977A2A958 498 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Pnma5Q5DTT8 618 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Hoxa13Q62424 386 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Krt74Q6IFZ9 495 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Kbtbd4Q8R179 534 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Nr3c2Q8VII8 978 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Dpp7Q9ET22 506 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Mkrn1Q9QXP6 481 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Tjp3Q9QXY1 905 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Nek3Q9R0A5 511 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Mpp3O88910 568 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Hoxa11P31311 313 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Wdr70Q3TWF6 657 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Gse1Q3U3C9 1213 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Xxylt1Q3U4G3 392 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Ift88Q61371 824 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Brd2Q7JJ13 798 aaKnown RBP13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Spata21Q8BHW6 681 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 NelfbQ8C4Y3 580 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Vav3Q9R0C8 847 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Plcb1Q9Z1B3 1216 aa13.9□□□□□ -0.18
Lig3-202ENSMUST00000080461 Ddx23D3Z0M9 819 aaKnown RBP13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Card6E9PWH2 1175 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 AoahO35298 574 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Parp1P11103 1013 aaKnown RBP13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Cdc37Q61081 379 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ccdc148Q6P5U8 527 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Frat2Q8K025 231 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ifih1Q8R5F7 1025 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Atp5c1Q91VR2 298 aaKnown RBP13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Polr2aP08775 1970 aaKnown RBP13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ankrd35E9Q9D8 996 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Trim30aP15533 496 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Mcm6P97311 821 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Adam6bQ6IMH7 756 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Sval3Q76I99 144 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Anks1bQ8BIZ1 1259 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ccdc122Q8BVN0 290 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Rrp9Q91WM3 475 aaKnown RBP13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ppp1r3gQ9CW07 347 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Cmtm5Q9D6G9 156 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 SelenooQ9DBC0 667 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Il21rQ9JHX3 529 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Tfr2Q9JKX3 798 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Gm15448F6PZL4 682 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Pcdha4O88689 947 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Adck2Q6NSR3 617 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Rasal3Q8C2K5 1041 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Desi2Q9D291 194 aa13.89□□□□□ -0.19
Lig3-202ENSMUST00000080461 Stat3P42227 770 aaKnown RBP13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Cdkn1cP49919 348 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Samsn1P57725 372 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Sp4Q62445 782 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Tmem87aQ8BXN9 555 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Cacnb1Q8R3Z5 597 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Tmx1Q8VBT0 278 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Usp14Q9JMA1 493 aaKnown RBP13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ccdc88cQ6VGS5 2009 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Pcdh11xF6ZNL5 1338 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Megf6Q80V70 1572 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Sv2cQ69ZS6 727 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Apol10aQ8CCA5 318 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Gys2Q8VCB3 704 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Aldh1b1Q9CZS1 519 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Q9DAQ4 598 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ddx20Q9JJY4 825 aaKnown RBP13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Lypla2Q9WTL7 231 aa13.88□□□□□ -0.19
Lig3-202ENSMUST00000080461 Skint3A7TZF0 458 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 PtpraP18052 829 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Pcif1P59114 706 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Igf2bp2Q5SF07 592 aaKnown RBP13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Asic1Q6NXK8 526 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Dnph1Q80VJ3 173 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Cyp4f39Q8BGU0 532 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Pcdha7Q91Y13 937 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Scgb2b18A0A087WPA9 112 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Zc3h7bF8VPP8 982 aaKnown RBP13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Kcnb1Q03717 857 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Pls1Q3V0K9 630 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Lrrc36Q3V0M2 755 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Foxn3Q499D0 457 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Kdm4bQ91VY5 1086 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Abcb6Q9DC29 842 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Ttc6G3UYY4 1857 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Mroh8E9PYI4 1049 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Sox5P35710 763 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Rbm12b2Q66JV4 834 aaKnown RBP13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Lrrc41Q8K1C9 807 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Eps8l1Q8R5F8 716 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Mfap3Q922T2 349 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Klhl10Q9D5V2 608 aa13.87□□□□□ -0.19
Lig3-202ENSMUST00000080461 Pappa2E9PZ87 1789 aa13.86□□□□□ -0.19
Lig3-202ENSMUST00000080461 4932429P05RikA2ADI4 785 aa13.86□□□□□ -0.19
Lig3-202ENSMUST00000080461 Pak1O88643 545 aa13.86□□□□□ -0.19
Lig3-202ENSMUST00000080461 Tpm2P58774 284 aa13.86□□□□□ -0.19
Lig3-202ENSMUST00000080461 Rgl1Q60695 768 aa13.86□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms