RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Krt15Q61414 452 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Zbtb39Q6PDK0 712 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Cplx4Q80WM3 160 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Erlin2Q8BFZ9 340 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Amhr2Q8K592 568 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sh2b1Q91ZM2 756 aa10.75□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Myh2G3UW82 1942 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tex13cD3YU32 604 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tmem132bF7BAB2 1078 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 DnttP09838 530 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kcna1P16388 495 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kif22Q3V300 660 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gm5935Q497S0 212 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kctd1Q5M956 257 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Meis1Q60954 390 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Znf428Q8C1M2 176 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rasal3Q8C2K5 1041 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gad1P48318 593 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kcnd1Q03719 651 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kctd16Q5DTY9 427 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ezh2Q61188 746 aaKnown RBP10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 MtrrQ8C1A3 696 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Scyl2Q8CFE4 930 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Osbpl1aQ91XL9 950 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Eps8l2Q99K30 729 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rcan1Q9JHG6 198 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 AdkP55264 361 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ift20Q61025 132 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tlr11Q6R5P0 926 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rab3il1Q8VDV3 383 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Scrn1Q9CZC8 414 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sertad1Q9JL10 236 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Pex11aQ9Z211 246 aa10.74□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ppef2O35385 757 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Cetn3O35648 167 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rfc1P35601 1131 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Snap25P60879 206 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tex35Q14BK3 207 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Mapk6Q61532 720 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 NfrkbQ6PIJ4 1296 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Bola2Q8BGS2 86 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rassf2Q8BMS9 326 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Trim9Q8C7M3 817 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tbc1d23Q8K0F1 684 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Pspc1Q8R326 523 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Xrcc4Q924T3 326 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 AdnpQ9Z103 1108 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tiam2Q6ZPF3 1715 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ank1Q02357 1862 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tjp1P39447 1745 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Serpina16D3Z660 418 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Akap2O54931 893 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Npy5rO70342 466 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Snx12O70493 165 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gdap1O88741 358 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tcp1P11983 556 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Actn4P57780 912 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ano9P86044 747 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Slc2a13Q3UHK1 637 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ccdc51Q3URS9 406 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sh3d21Q7TSG5 549 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Q8C1R3 189 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Cdk8Q8R3L8 464 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Trub2Q91WG3 331 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Calml4Q91WQ9 153 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kctd10Q922M3 315 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Dph5Q9CWQ0 281 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Abca15E9PWH4 1668 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Pcif1P59114 706 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Setdb2Q8C267 713 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ccdc38Q8CDN8 563 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Kiaa0319lQ8K135 1048 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Gtf3c5Q8R2T8 520 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Usp15Q8R5H1 981 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Slc44a4Q91VA1 707 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tmem39aQ9CYC3 486 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Zcrb1Q9CZ96 217 aaKnown RBP10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Mad2l2Q9D752 211 aa10.73□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Akap11E9Q777 1895 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rsbn1lD3Z0K6 821 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ccdc85cE9Q6B2 420 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Rps6ka1P18653 724 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tnnc1P19123 161 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Polr2fP61219 127 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Fam178bQ24JP3 464 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tax1bp1Q3UKC1 814 aaKnown RBP10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Anks6Q6GQX6 883 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Krt87Q6IMF0 495 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Slc51bQ80WK2 128 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Fbxo18Q8K2I9 1042 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 KynuQ9CXF0 464 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Serpinb12Q9D7P9 423 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 CoasyQ9DBL7 563 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Col18a1P39061 1774 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 1700018F24RikB2RW27 314 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ap1b1O35643 943 aaKnown RBP10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Xrcc6P23475 608 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Psmc2P46471 433 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Wdhd1P59328 1117 aa10.72□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Surf6P70279 355 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms