RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 PhkbQ7TSH2 1085 aa21.05■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Prkag3Q8BGM7 489 aa21.05■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Srek1Q8BZX4 494 aaKnown RBP21.05■□□□□ 0.96
Vti1b-201ENSMUST00000055262 PdgfcQ8CI19 345 aa21.05■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Kbtbd4Q8R179 534 aa21.05■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Mad1l1Q9WTX8 717 aaKnown RBP21.05■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Zc3h7bF8VPP8 982 aaKnown RBP21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Btg4O70552 250 aa21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Trappc10Q3TLI0 1259 aa21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Cyp26b1Q811W2 512 aa21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Tmem60Q8K174 133 aa21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Tspyl4Q8VD63 406 aa21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Tbx20Q9ES03 445 aa21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Dnajb2Q9QYI5 324 aa21.04■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Gm44511A0A0N4SW10 223 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Nme9A0A1L1SUL6 329 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Api5O35841 504 aaKnown RBP21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Prom1O54990 867 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Lnx1O70263 728 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Klrb1bP27812 223 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Gjb4Q02738 266 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Ubash3aQ3V3E1 624 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Tdp1Q8BJ37 609 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Gjc2Q8BQU6 440 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Hs2st1Q8R3H7 356 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Kdm8Q9CXT6 414 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Htra3Q9D236 459 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Adgrf4Q9D2L6 698 aa21.03■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Ccdc88cQ6VGS5 2009 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Gm7356A0A087WSA6 508 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Cyp26c1B2RXA7 518 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Cntnap3E9PY62 1287 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Gcnt4E9Q649 455 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Ampd3O08739 766 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Mcph1Q7TT79 822 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 F11Q91Y47 624 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Rassf3Q99P51 232 aa21.02■□□□□ 0.96
Vti1b-201ENSMUST00000055262 Pik3r1P26450 724 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 PtpreP49446 699 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Epha2Q03145 977 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Mre11Q61216 706 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Sec62Q8BU14 398 aaKnown RBP21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Ces1Q8VCC2 565 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Oip5A2AQ14 241 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Gm28047Q3US59 414 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Cyp2c29Q64458 490 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 NfrkbQ6PIJ4 1296 aaKnown RBP21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Moxd2Q7TT41 619 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Pramel7Q810Y8 479 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Zswim3Q8CFL8 695 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 DpydQ8CHR6 1025 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 AdpgkQ8VDL4 496 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 NenfQ9CQ45 171 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Dis3Q9CSH3 958 aaKnown RBP21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Snx29Q9D3S3 818 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Znf704Q9ERQ3 566 aa21.01■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Pitpnm1O35954 1243 aa21■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Irs1P35569 1233 aa21■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Nap1l4Q78ZA7 375 aaKnown RBP21■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Taco1Q8K0Z7 294 aaKnown RBP21■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Ankrd54Q91WK7 299 aa21■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Arpp21Q9DCB4 807 aa21■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Maged1Q9QYH6 775 aaKnown RBP21■□□□□ 0.95
Vti1b-201ENSMUST00000055262 A0A0U1RNP2 1173 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Rnf19bA2A7Q9 732 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Pdzrn4E9PUZ9 1014 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 SfnO70456 248 aaKnown RBP20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Sept4P28661 478 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Rbp3P49194 1234 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Ece1Q4PZA2 769 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Ube2q1Q7TSS2 422 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Bloc1s4Q8VED2 215 aa20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Npm3Q9CPP0 175 aaKnown RBP20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 AdnpQ9Z103 1108 aaKnown RBP20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Ktn1Q61595 1327 aaKnown RBP20.99■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Pgap3A2A559 320 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Btnl4A2CG29 586 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Slc6a20bO88575 635 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Cdc25aP48964 514 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Prmt6Q6NZB1 378 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Atg4cQ811C2 458 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Ppp2r5dQ91V89 594 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Apobec3Q99J72 440 aaKnown RBP20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Hic1Q9R1Y5 733 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Lypla2Q9WTL7 231 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Mtmr9Q9Z2D0 545 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Dennd4aE9Q8V6 1869 aa20.98■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Phldb3E9QAF4 648 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Itgb5O70309 798 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Gja8P28236 440 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Foxd1Q61345 456 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Krt87Q6IMF0 495 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Nap1l3Q794H2 544 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Kcnv2Q8CFS6 562 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Trim29Q8R2Q0 587 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Smc1bQ920F6 1248 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Cep72Q9D3R3 646 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Ggps1Q9WTN0 300 aa20.97■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Gm4758L7N258 96 aa20.96■□□□□ 0.95
Vti1b-201ENSMUST00000055262 Fzd1O70421 642 aa20.96■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms