RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Sema3fO88632 785 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Snai1Q02085 264 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Brinp3Q499E0 766 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Cep131Q62036 1060 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Sh3gl1Q62419 368 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ncapg2Q6DFV1 1138 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tlr11Q6R5P0 926 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Fnbp1Q80TY0 616 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Haus4Q8BFT2 363 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Erlin2Q8BFZ9 340 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 GopcQ8BH60 463 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Arhgef19Q8BWA8 802 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Q8BWG4 1187 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Spata2Q8K004 515 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 IntS13Q8QZV7 732 aa14.87□□□□□ -0.03
Nup88-201ENSMUST00000035283 Hnrnph2P70333 449 aaKnown RBP14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Nr1d1Q3UV55 615 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ddx54Q8K4L0 874 aaKnown RBP14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Uba5Q8VE47 403 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Olfr805Q8VFI4 319 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Eif3hQ91WK2 352 aaKnown RBP14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Xrcc4Q924T3 326 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Serpinb12Q9D7P9 423 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Calr3Q9D9Q6 380 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Klc4Q9DBS5 619 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tmem47Q9JJG6 181 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Clip2Q9Z0H8 1047 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 DccP70211 1447 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Hnrnph1O35737 449 aaKnown RBP14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Kcnma1Q08460 1209 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 PRAG1Q571I4 1179 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Pramel6Q810Y9 485 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Myl6bQ8CI43 207 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Rwdd2aQ9D9S3 292 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 FignQ9ERZ6 759 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tfap4Q9JIZ5 338 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tacc2Q9JJG0 1149 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tnip1Q9WUU8 647 aa14.86□□□□□ -0.03
Nup88-201ENSMUST00000035283 Gm7168A0AUV4 508 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Gad1P48318 593 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 PtgdrP70263 357 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Lrrfip1Q3UZ39 729 aaKnown RBP14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Znf697Q569E7 569 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 McamQ8R2Y2 648 aaKnown RBP14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Hs2st1Q8R3H7 356 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Vwa5aQ99KC8 793 aaKnown RBP14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Kremen1Q99N43 473 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 GsdmeQ9Z2D3 512 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ano3A2AHL1 981 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Gm1758F6VZZ1 202 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Abcb4P21440 1276 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Spout1Q3UHX9 385 aaKnown RBP14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tmprss11aQ3UQ41 389 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Mybpc2Q5XKE0 1136 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Npdc1Q64322 332 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Sdccag8Q80UF4 717 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Cc2d1bQ8BRN9 848 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 HlfQ8BW74 295 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 SowahdQ8BY98 327 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 BlmhQ8R016 455 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 AdpgkQ8VDL4 496 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Marf1Q8BJ34 1730 aaKnown RBP14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Dock5B2RY04 1868 aa14.85□□□□□ -0.03
Nup88-201ENSMUST00000035283 Nhsl1Q8CAF4 1587 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Mboat4P0C7A3 435 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tax1bp1Q3UKC1 814 aaKnown RBP14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tnni3kQ5GIG6 834 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Nsrp1Q5NCR9 542 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Pacsin1Q61644 441 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Slc51bQ80WK2 128 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ifih1Q8R5F7 1025 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ccdc105Q9D4K7 499 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 LrmdaQ9D9B4 229 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Scgb2b12S4R2L0 112 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 1700017N19RikA0A087WPJ1 469 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Fam107bQ3TGF2 131 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Psg29Q3URN6 468 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Gm5592Q3V0A6 857 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Ift20Q61025 132 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 NfrkbQ6PIJ4 1296 aaKnown RBP14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Tcp10aQ80W76 438 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Bbs9Q811G0 885 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Vps37cQ8R105 352 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Golph3Q9CRA5 298 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Epb41l3Q9WV92 929 aa14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Orc1Q9Z1N2 840 aaKnown RBP14.84□□□□□ -0.03
Nup88-201ENSMUST00000035283 Gm28510A0A087WP28 240 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 P4hbP09103 509 aaKnown RBP14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 GnaqP21279 359 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Tal1P22091 329 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Kcnj11Q61743 390 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Mettl5Q8K1A0 209 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Lgi2Q8K4Z0 550 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 1700020D05RikQ99PB1 294 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Dbndd1Q9CZ00 160 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 AacsQ9D2R0 672 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Capn9Q9D805 690 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Dydc1Q9D9T0 175 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Smco2Q9DA21 347 aa14.83□□□□□ -0.04
Nup88-201ENSMUST00000035283 Nme9A0A1L1SUL6 329 aa14.83□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms