RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Kctd1Q5M956 257 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Msl1Q6PDM1 616 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Asic3Q6X1Y6 530 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Fnbp4Q6ZQ03 1031 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Dpp8Q80YA7 892 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 CpzQ8R4V4 654 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ppp2r5dQ91V89 594 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tcp10bE9PYJ0 438 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Lilrb3P97484 841 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Zfp781Q0P5U5 243 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ddx49Q4FZF3 480 aaKnown RBP11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Tnni3kQ5GIG6 834 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 PrimpolQ6P1E7 537 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ankrd13dQ6PD24 605 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Trim9Q8C7M3 817 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Ccdc105Q9D4K7 499 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Pkd2l2Q9JLG4 621 aa11.84□□□□□ -0.51
Ptcd1-201ENSMUST00000031628 Herc3A6H6S0 1050 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Hps5P59438 1126 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Fam71bQ5STT6 665 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 BC048507Q80ZS7 89 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Slc9b1Q8C0X2 565 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Heg1E9Q7X6 1337 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Etnk2A7MCT6 385 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Gjc1P28229 396 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Fdx1P46656 188 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Nedd4P46935 887 aaKnown RBP11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 NeblQ0II04 452 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Chrna5Q2MKA5 467 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Esyt2Q3TZZ7 845 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 MmeQ61391 750 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Irak1Q62406 710 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Antxr2Q6DFX2 487 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ccdc73Q8CDM4 1066 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 OplahQ8K010 1288 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 TxlnbQ8VBT1 685 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 AvenQ9D9K3 342 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Slfn1Q9Z0I7 337 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Lrrc4bP0C192 709 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 GnaqP21279 359 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Dnm2P39054 870 aaKnown RBP11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Fam107bQ3TGF2 131 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ctnna3Q65CL1 895 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 WdpcpQ8C456 722 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Zfp446Q8C9M8 523 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ccdc186Q8C9S4 917 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Fbxo18Q8K2I9 1042 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Txnrd3Q99MD6 652 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 AllcQ9JHX6 414 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ccnt1Q9QWV9 724 aaKnown RBP11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Abhd2Q9QXM0 425 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Mtmr9Q9Z2D0 545 aa11.83□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Gm7168A0AUV4 508 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Zscan18E9PUD6 809 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Hnrnph1O35737 449 aaKnown RBP11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Atp11aP98197 1187 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Fam178bQ24JP3 464 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Znf827Q505G8 1078 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Glra4Q61603 456 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Pabpc4Q6PHQ9 660 aaKnown RBP11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Armcx6Q8K3A6 301 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Themis2Q91YX0 663 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 CactinQ9CS00 772 aaKnown RBP11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 March8Q9DBD2 286 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Akap8Q9DBR0 687 aaKnown RBP11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Gm45208A0A140LJ36 292 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Top1Q04750 767 aaKnown RBP11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Glg1Q61543 1175 aaKnown RBP11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ushbp1Q8R370 680 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Hs2st1Q8R3H7 356 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ears2Q9CXJ1 523 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Klf15Q9EPW2 415 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ubr3Q5U430 1889 aa11.82□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Abcb4P21440 1276 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Akr1b1P45376 316 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Hnrnph2P70333 449 aaKnown RBP11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Pls1Q3V0K9 630 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Map3k12Q60700 888 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 RragaQ80X95 313 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Eif2b5Q8CHW4 717 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Slc4a8Q8JZR6 1089 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Sh2b1Q91ZM2 756 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Kremen1Q99N43 473 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 CutaQ9CQ89 177 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 UvssaQ9D479 717 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Apol6B7ZC55 329 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Foxn2E9Q7L6 429 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Nol4P60954 483 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Slc9a2Q3ZAS0 814 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ezh2Q61188 746 aaKnown RBP11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 EregQ61521 162 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Fkbp3Q62446 224 aaKnown RBP11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Bank1Q80VH0 783 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Cc2d1bQ8BRN9 848 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Efcab8Q8C9R9 203 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Sumf1Q8R0F3 372 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 AacsQ9D2R0 672 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Ptf1aQ9QX98 324 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 Klrc1Q9Z202 244 aa11.81□□□□□ -0.52
Ptcd1-201ENSMUST00000031628 NpcdF8VQB8 469 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms