RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gm7168A0AUV4 508 aa14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Mx1P09922 631 aa14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Hmgb2P30681 210 aaKnown RBP14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Atp6v1aP50516 617 aaKnown RBP14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Meis3P97368 378 aa14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Tnfaip8l3Q3TBL6 204 aa14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Tmtc1Q3UV71 942 aa14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 PigsQ6PD26 555 aaKnown RBP14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Tmc4Q7TQ65 694 aa14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Ccnt1Q9QWV9 724 aaKnown RBP14.16□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Nedd1P33215 660 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Klrg2Q3UM83 387 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Mcm7Q61881 719 aaKnown RBP14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Lmbrd1Q8K0B2 537 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Ifih1Q8R5F7 1025 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Psmd2Q8VDM4 908 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Card14Q99KF0 999 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Eef1gQ9D8N0 437 aaKnown RBP14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Tjap1Q9DCD5 539 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Lrrc4bP0C192 709 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Cdc25aP48964 514 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Cep112Q5PR68 954 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Map3k12Q60700 888 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Ddx3yQ62095 658 aaKnown RBP14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 CrkQ64010 304 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Fam196bQ6GQV1 535 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Mettl5Q8K1A0 209 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Kbtbd4Q8R179 534 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Sned1Q70E20 1403 aa14.15□□□□□ -0.14
Rnf4-201ENSMUST00000030992 Ifi207E9Q3L4 978 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Rfpl4bJ3QPR6 266 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Jakmip3Q5DTN8 844 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Papd7Q6PB75 542 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Plagl2Q925T4 496 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 AacsQ9D2R0 672 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ndst4Q9EQW8 872 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Vav3Q9R0C8 847 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 AdnpQ9Z103 1108 aaKnown RBP14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 MtrA6H5Y3 1253 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Gm1993A6X8I0 212 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 SlxD3Z347 212 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Lig1P37913 916 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 AaasP58742 546 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Map9Q3TRR0 646 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Znhit6Q3UFB2 460 aaKnown RBP14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Tmem232Q5K6N0 675 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Mettl25Q6NXH8 597 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Atp1a2Q6PIE5 1020 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 PodnQ7TQ62 611 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Maip1Q8BHE8 291 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ift74Q8BKE9 600 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Col1a1P11087 1453 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Psme4Q5SSW2 1843 aa14.14□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Calcoco2A2A6M5 331 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ube3aO08759 870 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Abcb4P21440 1276 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Tcp11Q01755 566 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Cyp2e1Q05421 493 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Fbln1Q08879 705 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 LbrQ3U9G9 626 aaKnown RBP14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Qrich1Q3UA37 777 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Brip1Q5SXJ3 1174 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ddah1Q9CWS0 285 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Myoz2Q9JJW5 264 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Sept2P42208 361 aaKnown RBP14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 ItgadQ3V0T4 1168 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Akap4Q60662 849 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Lamc2Q61092 1191 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ctnna3Q65CL1 895 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ankrd24Q80VM7 985 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Map3k11Q80XI6 850 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Hpcal4Q8BGZ1 191 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Hirip3Q8BLH7 601 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ces1Q8VCC2 565 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Atp1a1Q8VDN2 1023 aaKnown RBP14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Flt1P35969 1333 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Btaf1E9QAE3 1848 aa14.13□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Nedd4P46935 887 aaKnown RBP14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Foxd1Q61345 456 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ptger2Q62053 362 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Lrrcc1Q69ZB0 1026 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Olfr832Q7TRG9 312 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Rcor2Q8C796 523 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Znf131Q8K3J5 619 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Saal1Q9D2C2 474 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ccdc105Q9D4K7 499 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 SmapQ9R0P4 181 aaKnown RBP14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 ArcQ9WV31 396 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 EporP14753 507 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 ItpripQ3TNL8 555 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Nap1l4Q78ZA7 375 aaKnown RBP14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Efcab8Q8C9R9 203 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Nf2P46662 596 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Cacnb3P54285 484 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Pdrg1P59048 133 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Cct6aP80317 531 aaKnown RBP14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Meis2P97367 477 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Tshz1Q5DTH5 1084 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Ccdc42Q5SV66 316 aa14.12□□□□□ -0.15
Rnf4-201ENSMUST00000030992 Msl1Q6PDM1 616 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms