RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Prr11Q8BHE0 368 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Bcas3Q8CCN5 928 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Vmn1r203Q8R273 311 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Kdm8Q9CXT6 414 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Tfcp2Q9ERA0 502 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 GraspQ9JJA9 392 aa13.06□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 SrcapA0A087WQ44 3271 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cspp1B2RX88 1205 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Guca2bO09051 106 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 RarbP22605 482 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 FanccP50652 591 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Fam89aQ14BJ1 175 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Kcnj14Q8JZN3 434 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Taco1Q8K0Z7 294 aaKnown RBP13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Rassf3Q99P51 232 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Dnajc18Q9CZJ9 357 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cul5Q9D5V5 780 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Capn10Q9ESK3 666 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 PolkQ9QUG2 852 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Plxnb3Q9QY40 1902 aa13.05□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Dnajc25A2ALW5 357 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 TroapB7ZNG4 668 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Pdzrn4E9PUZ9 1014 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Nolc1E9Q5C9 702 aaKnown RBP13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Gm8882E9Q7E4 283 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Gm20503G3UZK1 150 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cyp3a25O09158 503 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Mt-CybP00158 381 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Xxylt1Q3U4G3 392 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Tnni3kQ5GIG6 834 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Slc27a1Q60714 646 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 1700010I14RikQ7TPG0 532 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Bud13Q8R149 637 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Ces1Q8VCC2 565 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Ddx41Q91VN6 622 aaKnown RBP13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Vwa5aQ99KC8 793 aaKnown RBP13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Hip1rQ9JKY5 1068 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Limd1Q9QXD8 668 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Plod3Q9R0E1 741 aa13.04□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Pramef17A2ASJ1 475 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Eef2kO08796 724 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cplx2P84086 134 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Gjb4Q02738 266 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Antxr2Q6DFX2 487 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Ece2Q80Z60 881 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Kdm4aQ8BW72 1064 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 KinQ8K339 391 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Tubb6Q922F4 447 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Trim59Q922Y2 403 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Me2Q99KE1 589 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Pkp2Q9CQ73 795 aaKnown RBP13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Cep72Q9D3R3 646 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Q9DAQ4 598 aa13.03□□□□□ -0.32
Ccdc28b-201ENSMUST00000030586 Gm7356A0A087WSA6 508 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Dnai2A2AC93 623 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tlk2O55047 718 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 StamP70297 548 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cdkl5Q3UTQ8 938 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Arhgap1Q5FWK3 439 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Igf2bp2Q5SF07 592 aaKnown RBP13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Calhm6Q8C9E8 313 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Defb19Q8K3I8 83 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Iffo2Q8R2V2 512 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tmc1Q8R4P5 757 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Ca9Q8VHB5 437 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Hdhd5Q91WM2 419 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Pcdhac2Q91Y09 1006 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tas1r1Q99PG6 842 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Mbtps1Q9WTZ2 1052 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cdc42ep5Q9Z0X0 150 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Ttc6G3UYY4 1857 aa13.02□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Mia3Q8BI84 1930 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Kiaa0100Q5SYL3 2234 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Gm4758L7N258 96 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Atp9aO70228 1047 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 SfnO70456 248 aaKnown RBP13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 FosbP13346 338 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Samhd1Q60710 627 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Madcam1Q61826 405 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Tfe3Q64092 572 aaKnown RBP13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Gpc2Q8BKV1 579 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Kbtbd4Q8R179 534 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 SdsQ8VBT2 327 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Kctd10Q922M3 315 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Xpo5Q924C1 1204 aaKnown RBP13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Alg13Q9D8C3 1166 aaKnown RBP13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Cntnap5cQ0V8T7 1305 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Sbf2E9PXF8 1872 aa13.01□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Dennd4aE9Q8V6 1869 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Rabep1O35551 862 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 FosP01101 380 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 ArP19091 899 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Gna11P21278 359 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 GlrbP48168 496 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Gpd2Q64521 727 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Me3Q8BMF3 604 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Map1sQ8C052 973 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 MafaQ8CF90 359 aa13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 Nat10Q8K224 1024 aaKnown RBP13□□□□□ -0.33
Ccdc28b-201ENSMUST00000030586 AclyQ91V92 1091 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms