RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Nod2Q8K3Z0 1020 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Cgref1Q8R1U2 281 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Ap2b1Q9DBG3 937 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Polr2fP61219 127 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Strip2Q8C9H6 844 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Q9CR55 154 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Lonrf3Q9D4H7 753 aa15.08■□□□□ 0
Col5a1-201ENSMUST00000028280 Cfap221A9Q751 836 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Trpc6Q61143 930 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Krt75Q8BGZ7 551 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Psmg1Q9JK23 289 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Gli2Q0VGT2 1544 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 FscbA1EGX6 1074 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Gm3248K7N721 186 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Slc12a1P55014 1095 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Gas7Q60780 421 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Copg1Q9QZE5 874 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Tex14Q7M6U3 1450 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Itsn2Q9Z0R6 1659 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Arhgef10lA2AWP8 1280 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Prl3d1P18121 224 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Dab1P97318 588 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Krt26Q3TRJ4 462 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Q3TTJ4 293 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Svs3bQ8BZH8 265 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 IdeQ9JHR7 1019 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Pard3Q99NH2 1333 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 H2afzP0C0S6 128 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Lrch1P62046 709 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Atp8a2P98200 1148 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 H2afvQ3THW5 128 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Fbxo9Q8BK06 437 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 CenpuQ8C4M7 410 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Slc35f6Q8VE96 372 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Tfcp2Q9ERA0 502 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Kdm3bQ6ZPY7 1562 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Mmrn1B2RPV6 1210 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Znf667Q2TL60 609 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 DeptorQ570Y9 409 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Krt74Q6IFZ9 495 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Snx14Q8BHY8 964 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 4933406M09RikG3XA12 479 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Gm3402K7N5P2 326 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 MafgO54790 162 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 LmnaP48678 665 aaKnown RBP15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 WhammQ571B6 793 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Ecel1Q9JMI0 775 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 SphkapQ6NSW3 1687 aa15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Cpsf1Q9EPU4 1441 aaKnown RBP15.07■□□□□ 0
Col5a1-201ENSMUST00000028280 Pja1O55176 578 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 NficP70255 439 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Sgsm2Q80U12 1005 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Pfkfb1P70266 471 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Dnajc17Q91WT4 303 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Tor1aip1Q921T2 595 aaKnown RBP15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Med23Q80YQ2 1367 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Nr1h4Q60641 488 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Ccdc15Q8C9M2 810 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Prmt9Q3U3W5 846 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Fam217aQ9D9W6 419 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Tbc1d1Q60949 1255 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Ero1aQ8R180 464 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Pls3Q99K51 630 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Card6E9PWH2 1175 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Gm10639E9Q6L7 222 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Gsta2P10648 222 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Lzts1P60853 599 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Rhpn1Q61085 643 aa15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 CtcfQ61164 736 aaKnown RBP15.06■□□□□ 0
Col5a1-201ENSMUST00000028280 Cdcp1Q5U462 833 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Q6PD19 689 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Dclk2Q6PGN3 756 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Kcnj14Q8JZN3 434 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 GssP51855 474 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Taf1bP97358 586 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Creb3Q61817 404 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Nlrp9aQ66X03 949 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Ccdc159Q8C963 411 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Trpc5Q9QX29 975 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Kdm6aO70546 1401 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Gm10354K7N6A0 256 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 E2f6O54917 272 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 PtprgQ05909 1442 aa15.05■□□□□ 0
Col5a1-201ENSMUST00000028280 Gm4871D3Z0W7 314 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Tac1P41539 130 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Syt2P46097 422 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Timm10P62073 90 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Coq7P97478 217 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Atp1a3Q6PIC6 1013 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Csgalnact2Q8C1F4 542 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Tdrd7Q8K1H1 1086 aaKnown RBP15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Mfap3Q922T2 349 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Gins4Q99LZ3 223 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 3830403N18RikQ9D6C3 208 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Ccdc24E9PUW8 296 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Top3aO70157 1003 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Stmn3O70166 180 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Sash1P59808 1230 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Armc2Q3URY6 854 aa15.05■□□□□ -0
Col5a1-201ENSMUST00000028280 Riox2Q8CD15 465 aa15.05■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms