RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Dnajb6O54946 365 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Abcb4P21440 1276 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Zmym1Q3TJB1 983 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Hdhd2Q3UGR5 259 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Large2Q5XPT3 690 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Prpf6Q91YR7 941 aaKnown RBP17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Coro7Q9D2V7 922 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Sept14Q9DA97 430 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Acot3Q9QYR7 432 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 NeblQ0II04 452 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Atp8b1Q148W0 1251 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 F13a1Q8BH61 732 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 RtcbQ99LF4 505 aaKnown RBP17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Rcan1Q9JHG6 198 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 ThegQ9JMB1 375 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Peg12Q9WVA7 283 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Nfxl1E9Q8I7 918 aaKnown RBP17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Guca2bO09051 106 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Psmd14O35593 310 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ppfibp2O35711 882 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Dpp8Q80YA7 892 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Creb3l3Q91XE9 479 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Calm1P0DP26 149 aaKnown RBP17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Calm2P0DP27 149 aaKnown RBP17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Calm3P0DP28 149 aaKnown RBP17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 DSCC1Q14AI0 399 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Dhx37Q6NZL1 1150 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 PicalmQ7M6Y3 660 aaKnown RBP17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Aggf1Q7TN31 711 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Zfp446Q8C9M8 523 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Fermt2Q8CIB5 680 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Tldc1Q8K0P3 455 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 ParnQ8VDG3 624 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Eif4a3Q91VC3 411 aaKnown RBP17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Calml3Q9D6P8 149 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Epb41l3Q9WV92 929 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Myh13B1AR69 1938 aa17.95■□□□□ 0.46
Trim28-201ENSMUST00000005705 Scgb2b11A0A087WR49 112 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Snx12O70493 165 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Fbln1Q08879 705 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Emc10Q3TAS6 258 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Dlg1Q811D0 905 aaKnown RBP17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Cdk8Q8R3L8 464 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 AacsQ9D2R0 672 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 GscQ02591 256 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Plekha7Q3UIL6 1118 aaKnown RBP17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 MaeaQ4VC33 396 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Sco1Q5SUC9 284 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ccdc42Q5SV66 316 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Klra4Q60651 263 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Mmtag2Q99LX5 260 aaKnown RBP17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Hsd3b7Q9EQC1 369 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Aox3G3X982 1335 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Gm45208A0A140LJ36 292 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 1700016G14RikA0A286YCZ6 238 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Etnk2A7MCT6 385 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Pdrg1P59048 133 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Fam183bQ5NC57 135 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Zrsr2Q62377 462 aaKnown RBP17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ncapg2Q6DFV1 1138 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Krt42Q6IFX2 452 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Lrrn2Q6PHP6 730 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Kiaa1024Q8K3V7 917 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Usp15Q8R5H1 981 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 CutaQ9CQ89 177 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Dydc1Q9D9T0 175 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 SyncQ9EPM5 470 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 Tnip1Q9WUU8 647 aa17.94■□□□□ 0.46
Trim28-201ENSMUST00000005705 LrmpQ60664 539 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Vmn1r218Q8R261 298 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Erlin1Q91X78 346 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Fer1l6E0CZ42 1862 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Nup98Q6PFD9 1816 aaKnown RBP17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 JcadQ5DTX6 1320 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 GabreA2AMW3 916 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 NpcdF8VQB8 469 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Mboat4P0C7A3 435 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ifnar1P33896 590 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 GopcQ8BH60 463 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Haus1Q8BHX1 278 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ubxn1Q922Y1 297 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Tsnaxip1Q99P25 704 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 PdhbQ9D051 359 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 March8Q9DBD2 286 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Pkd2l2Q9JLG4 621 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ptf1aQ9QX98 324 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Abhd2Q9QXM0 425 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Scn11aQ9R053 1765 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Gm1993A6X8I0 212 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 SlxD3Z347 212 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 PcQ05920 1178 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Kdm7aQ3UWM4 940 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Klhl7Q8BUL5 586 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Trim9Q8C7M3 817 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 4930550L24RikQ99PA7 320 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Ndufab1Q9CR21 156 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Eif4enif1Q9EST3 983 aaKnown RBP17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Mkrn1Q9QXP6 481 aa17.93■□□□□ 0.46
Trim28-201ENSMUST00000005705 Nr1i2O54915 431 aa17.92■□□□□ 0.46
Trim28-201ENSMUST00000005705 Grem2O88273 168 aa17.92■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms