RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Proca1B0QZF7 307 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Per2O54943 1257 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Lrrc6O88978 473 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Grin1P35438 938 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Bach1P97302 739 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Eme2Q56A04 373 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 LrmpQ60664 539 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rasa3Q60790 834 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Hdac4Q6NZM9 1076 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Serpinb3dQ6UKZ0 387 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Haus4Q8BFT2 363 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Suds3Q8BR65 328 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Zfp113Q8C689 439 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Apopt1Q9CQW7 192 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fam133bQ9CVI2 245 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Dbndd1Q9CZ00 160 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Usp14Q9JMA1 493 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nr2f2P43135 414 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Oxr1Q4KMM3 866 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 CoilQ5SU73 570 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sh3gl3Q62421 347 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Slc4a7Q8BTY2 1034 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Slc18a1Q8R090 521 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cdk5rap3Q99LM2 503 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rpa3Q9CQ71 121 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 CpvlQ9D3S9 478 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Dnajb7Q9QYI8 312 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Efcab6Q6P1E8 1516 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cd3dP04235 173 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Patl1Q3TC46 770 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Miga2Q8BK03 593 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ankk1Q8BZ25 745 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rassf9Q8K342 435 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ces1dQ8VCT4 565 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Hps3Q91VB4 1002 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nek8Q91ZR4 698 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Kctd10Q922M3 315 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Creld2Q9CYA0 350 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 AacsQ9D2R0 672 aa9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Thoc2B1AZI6 1594 aaKnown RBP9.92□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Mmrn1B2RPV6 1210 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 EsrraO08580 422 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Axin2O88566 840 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ctnnd1P30999 938 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Stat4P42228 749 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Wdr70Q3TWF6 657 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 HelbQ6NVF4 1074 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Serpinb13Q8CDC0 389 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 HgsQ99LI8 775 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Fgfr1op2Q9CRA9 253 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cmtm5Q9D6G9 156 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Tmem191cQ9JJB1 302 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Psmd10Q9Z2X2 231 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Uggt2E9Q4X2 1504 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ccdc194A0A140LIT1 234 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Atf5O70191 283 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Cav1P49817 178 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Zscan2Q07230 614 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Trim72Q1XH17 477 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Zbtb8osQ505B7 168 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Lamc2Q61092 1191 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Bcap29Q61334 240 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 ThrspQ62264 150 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Mtmr10Q7TPM9 771 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 HnrnprQ8VHM5 632 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rrp15Q9CYX7 281 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Desi2Q9D291 194 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 3830403N18RikQ9D6C3 208 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Foxp4Q9DBY0 795 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Telo2Q9DC40 840 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pex3Q9QXY9 372 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Snx1Q9WV80 522 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 3425401B19RikD3Z1D3 1412 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Casq2O09161 415 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Hspa1lP16627 641 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Palb2Q3U0P1 1104 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nop9Q8BMC4 636 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 E4f1Q8CCE9 783 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Arhgap18Q8K0Q5 663 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Taf5lQ91WQ5 589 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nde1Q9CZA6 344 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Il2P04351 169 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Xrcc6P23475 608 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Sap30bpQ02614 308 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gtpbp6Q3U6U5 514 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Gm136Q3V037 328 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Nt5c2Q3V1L4 560 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ppp2r5cQ60996 524 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Itih3Q61704 889 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Ccdc154Q6RUT8 657 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pde10aQ8CA95 790 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 P3h4Q8K2B0 443 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Rbm6S4R1W5 1118 aaKnown RBP9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Slx4Q6P1D7 1565 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Myo3bQ1EG27 1305 aa9.91□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 AU022751B1B0V2 589 aa9.9□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Apol11bE9PUZ0 337 aa9.9□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Pde8bE9Q4S1 865 aa9.9□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Taf1bP97358 586 aa9.9□□□□□ -0.82
Ccdc47-201ENSMUST00000002043 Vav2Q60992 868 aa9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms