RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C TY1B-ORQ92393 1755 aa7.88□□□□□ -1.15
VPS4YPR173C DSF2P38213 736 aa7.87□□□□□ -1.15
VPS4YPR173C NUP159P40477 1460 aa7.86□□□□□ -1.15
VPS4YPR173C DNF1P32660 1571 aa7.86□□□□□ -1.15
VPS4YPR173C YBT1P32386 1661 aa7.86□□□□□ -1.15
VPS4YPR173C ESC1Q03661 1658 aaKnown RBP7.86□□□□□ -1.15
VPS4YPR173C SET4P42948 560 aa7.85□□□□□ -1.15
VPS4YPR173C SRB8P25648 1427 aa7.83□□□□□ -1.16
VPS4YPR173C MAK21Q12176 1025 aaKnown RBP7.83□□□□□ -1.16
VPS4YPR173C GEA2P39993 1459 aaKnown RBP7.83□□□□□ -1.16
VPS4YPR173C DCW1P36091 449 aa7.82□□□□□ -1.16
VPS4YPR173C RPN1P38764 993 aaKnown RBP7.82□□□□□ -1.16
VPS4YPR173C HTA1P04911 132 aaKnown RBP7.81□□□□□ -1.16
VPS4YPR173C HTA2P04912 132 aa7.81□□□□□ -1.16
VPS4YPR173C NOP7P53261 605 aaKnown RBP7.81□□□□□ -1.16
VPS4YPR173C IRC20Q06554 1556 aa7.81□□□□□ -1.16
VPS4YPR173C TY1B-JR2P47100 1755 aaKnown RBP7.81□□□□□ -1.16
VPS4YPR173C TY1B-ER2Q03619 1755 aa7.81□□□□□ -1.16
VPS4YPR173C TY1B-MR1Q04214 1755 aa7.81□□□□□ -1.16
VPS4YPR173C TY1B-MR2Q04670 1755 aaKnown RBP7.81□□□□□ -1.16
VPS4YPR173C TY1B-LR1Q12088 1755 aaKnown RBP7.81□□□□□ -1.16
VPS4YPR173C TY1B-NL1Q12112 1755 aa7.81□□□□□ -1.16
VPS4YPR173C TY1B-GR1Q12141 1755 aa7.81□□□□□ -1.16
VPS4YPR173C TY1B-BLQ12490 1755 aa7.81□□□□□ -1.16
VPS4YPR173C GCN2P15442 1659 aa7.81□□□□□ -1.16
VPS4YPR173C EAP1P36041 632 aaKnown RBP7.8□□□□□ -1.16
VPS4YPR173C TIF11P38912 153 aaKnown RBP7.8□□□□□ -1.16
VPS4YPR173C VHR2P40041 505 aa7.8□□□□□ -1.16
VPS4YPR173C YGR273CP53329 174 aa7.8□□□□□ -1.16
VPS4YPR173C MAM3Q12296 706 aa7.8□□□□□ -1.16
VPS4YPR173C MHP1P43638 1398 aa7.8□□□□□ -1.16
VPS4YPR173C CDC25P04821 1589 aa7.8□□□□□ -1.16
VPS4YPR173C COX6P00427 148 aa7.78□□□□□ -1.16
VPS4YPR173C SOL3P38858 249 aa7.78□□□□□ -1.16
VPS4YPR173C UBP14P38237 781 aaKnown RBP7.78□□□□□ -1.16
VPS4YPR173C YLR419WQ06698 1435 aaKnown RBP7.77□□□□□ -1.16
VPS4YPR173C NST1P53935 1240 aa7.77□□□□□ -1.17
VPS4YPR173C YLR326WQ06170 240 aaKnown RBP7.77□□□□□ -1.17
VPS4YPR173C IES2P40154 320 aa7.76□□□□□ -1.17
VPS4YPR173C PDR5P33302 1511 aaKnown RBP7.76□□□□□ -1.17
VPS4YPR173C BUD21Q08492 214 aaPredicted RBP7.75□□□□□ -1.17
VPS4YPR173C GDB1Q06625 1536 aa7.74□□□□□ -1.17
VPS4YPR173C YDR090CQ03193 310 aa7.74□□□□□ -1.17
VPS4YPR173C AIR2Q12476 344 aaKnown RBP7.74□□□□□ -1.17
VPS4YPR173C KEX1P09620 729 aa7.73□□□□□ -1.17
VPS4YPR173C PAF1P38351 445 aa7.73□□□□□ -1.17
VPS4YPR173C FKH1P40466 484 aa7.73□□□□□ -1.17
VPS4YPR173C ARO1P08566 1588 aaKnown RBP7.72□□□□□ -1.17
VPS4YPR173C TRP5P00931 707 aaKnown RBP7.72□□□□□ -1.17
VPS4YPR173C AI4P03878 556 aa7.72□□□□□ -1.17
VPS4YPR173C KIC1P38692 1080 aa7.72□□□□□ -1.17
VPS4YPR173C YEL023CP39992 682 aa7.72□□□□□ -1.17
VPS4YPR173C ULI1P43604 169 aa7.72□□□□□ -1.17
VPS4YPR173C YNR021WP53723 404 aaKnown RBP7.72□□□□□ -1.17
VPS4YPR173C MMS1Q06211 1407 aa7.71□□□□□ -1.17
VPS4YPR173C MPH3P0CE00 602 aa7.71□□□□□ -1.18
VPS4YPR173C RPO21P04050 1733 aaKnown RBP7.7□□□□□ -1.18
VPS4YPR173C DIT2P21595 489 aa7.7□□□□□ -1.18
VPS4YPR173C RAD54P32863 898 aa7.7□□□□□ -1.18
VPS4YPR173C NUP42P49686 430 aaKnown RBP7.7□□□□□ -1.18
VPS4YPR173C JIP4Q03361 876 aa7.7□□□□□ -1.18
VPS4YPR173C IOC2Q12072 812 aa7.7□□□□□ -1.18
VPS4YPR173C LDB19Q12502 818 aa7.7□□□□□ -1.18
VPS4YPR173C PTC4P38089 393 aa7.69□□□□□ -1.18
VPS4YPR173C PCS60P38137 543 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
VPS4YPR173C MET10P39692 1035 aa7.68□□□□□ -1.18
VPS4YPR173C YJL171CP46992 396 aa7.68□□□□□ -1.18
VPS4YPR173C ORC1P54784 914 aaPredicted RBP7.68□□□□□ -1.18
VPS4YPR173C NTE1Q04958 1679 aa7.68□□□□□ -1.18
VPS4YPR173C GLC3P32775 704 aa7.67□□□□□ -1.18
VPS4YPR173C PDS5Q04264 1277 aa7.67□□□□□ -1.18
VPS4YPR173C IQG1Q12280 1495 aa7.66□□□□□ -1.18
VPS4YPR173C ILV3P39522 585 aaKnown RBP7.66□□□□□ -1.18
VPS4YPR173C TY3B-IQ7LHG5 1498 aaKnown RBP7.65□□□□□ -1.18
VPS4YPR173C DAN4P47179 1161 aa7.65□□□□□ -1.18
VPS4YPR173C RPA190P10964 1664 aaKnown RBP7.65□□□□□ -1.19
VPS4YPR173C PDR12Q02785 1511 aa7.64□□□□□ -1.19
VPS4YPR173C YNL035CP53962 389 aaKnown RBP7.63□□□□□ -1.19
VPS4YPR173C NUP157P40064 1391 aaKnown RBP7.63□□□□□ -1.19
VPS4YPR173C YSP2Q06681 1438 aa7.63□□□□□ -1.19
VPS4YPR173C SCT1P32784 759 aa7.62□□□□□ -1.19
VPS4YPR173C CFT1Q06632 1357 aaKnown RBP7.62□□□□□ -1.19
VPS4YPR173C KIN1P13185 1064 aa7.61□□□□□ -1.19
VPS4YPR173C ATF2P53296 535 aa7.61□□□□□ -1.19
VPS4YPR173C AIM7Q12156 149 aa7.61□□□□□ -1.19
VPS4YPR173C CAB3P36076 571 aa7.6□□□□□ -1.19
VPS4YPR173C BUD3P25558 1636 aa7.6□□□□□ -1.19
VPS4YPR173C RPP0P05317 312 aaKnown RBP7.59□□□□□ -1.19
VPS4YPR173C SLI15P38283 698 aa7.59□□□□□ -1.19
VPS4YPR173C LTE1P07866 1435 aa7.59□□□□□ -1.2
VPS4YPR173C RTC1Q08281 1341 aa7.58□□□□□ -1.2
VPS4YPR173C PSE1P32337 1089 aaKnown RBP7.58□□□□□ -1.2
VPS4YPR173C SEC61P32915 480 aa7.58□□□□□ -1.2
VPS4YPR173C RAV1P47104 1357 aa7.58□□□□□ -1.2
VPS4YPR173C RPC31P17890 251 aa7.57□□□□□ -1.2
VPS4YPR173C RTG1P32607 177 aa7.57□□□□□ -1.2
VPS4YPR173C CDC45Q08032 650 aa7.57□□□□□ -1.2
VPS4YPR173C SPO14P36126 1683 aa7.57□□□□□ -1.2
VPS4YPR173C YOR093CQ12275 1648 aa7.57□□□□□ -1.2
VPS4YPR173C RPP1BP10622 106 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 5,963 RNA–protein pairs in 132.5 ms