RNA–Protein interactions for RNA: YPL066W

RGL1, Transcript of Regulator of Rho1p signaling, cofactor of Tus1p, yeast

Gene RGL1, Length 1,440 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RGL1	YPL066W	YPR109W	Q06104	294 aa		7.89	□□□□□ -1.15
RGL1	YPL066W	MRF1	P30775	413 aa	Predicted RBP	7.88	□□□□□ -1.15
RGL1	YPL066W	GCD11	P32481	527 aa	Known RBP	7.88	□□□□□ -1.15
RGL1	YPL066W	NPL4	P33755	580 aa		7.88	□□□□□ -1.15
RGL1	YPL066W	CST6	P40535	587 aa		7.86	□□□□□ -1.15
RGL1	YPL066W	PBS2	P08018	668 aa		7.84	□□□□□ -1.15
RGL1	YPL066W	ERG12	P07277	443 aa		7.83	□□□□□ -1.16
RGL1	YPL066W	CLA4	P48562	842 aa		7.83	□□□□□ -1.16
RGL1	YPL066W	ERF2	Q06551	359 aa		7.82	□□□□□ -1.16
RGL1	YPL066W	AIR1	P40507	360 aa	Known RBP	7.81	□□□□□ -1.16
RGL1	YPL066W	KEX2	P13134	814 aa		7.79	□□□□□ -1.16
RGL1	YPL066W	SPT16	P32558	1035 aa	Known RBP	7.79	□□□□□ -1.16
RGL1	YPL066W	RRN7	P40992	514 aa		7.79	□□□□□ -1.16
RGL1	YPL066W	CKB1	P43639	278 aa		7.78	□□□□□ -1.16
RGL1	YPL066W	LAM6	Q08001	693 aa		7.78	□□□□□ -1.16
RGL1	YPL066W	DMA1	P38823	416 aa		7.77	□□□□□ -1.17
RGL1	YPL066W	FRK1	Q03002	865 aa	Predicted RBP	7.77	□□□□□ -1.17
RGL1	YPL066W	BDP1	P46678	594 aa		7.73	□□□□□ -1.17
RGL1	YPL066W	PSE1	P32337	1089 aa	Known RBP	7.72	□□□□□ -1.17
RGL1	YPL066W	RGA1	P39083	1007 aa		7.72	□□□□□ -1.17
RGL1	YPL066W	MAM3	Q12296	706 aa		7.72	□□□□□ -1.17
RGL1	YPL066W	IES2	P40154	320 aa		7.7	□□□□□ -1.18
RGL1	YPL066W	PAC1	P39946	494 aa	Known RBP	7.69	□□□□□ -1.18
RGL1	YPL066W	SAS10	Q12136	610 aa	Predicted RBP	7.69	□□□□□ -1.18
RGL1	YPL066W	PAT1	P25644	796 aa	Known RBP	7.68	□□□□□ -1.18
RGL1	YPL066W	DSF2	P38213	736 aa		7.68	□□□□□ -1.18
RGL1	YPL066W	BRE2	P43132	505 aa		7.66	□□□□□ -1.18
RGL1	YPL066W	AGE1	Q04412	482 aa		7.66	□□□□□ -1.18
RGL1	YPL066W	NUP42	P49686	430 aa	Known RBP	7.65	□□□□□ -1.18
RGL1	YPL066W	RGA2	Q06407	1009 aa		7.64	□□□□□ -1.19
RGL1	YPL066W	TUB4	P53378	473 aa		7.63	□□□□□ -1.19
RGL1	YPL066W	CDC4	P07834	779 aa		7.62	□□□□□ -1.19
RGL1	YPL066W	CLB5	P30283	435 aa		7.62	□□□□□ -1.19
RGL1	YPL066W	MOD5	P07884	428 aa		7.61	□□□□□ -1.19
RGL1	YPL066W	DIT2	P21595	489 aa		7.61	□□□□□ -1.19
RGL1	YPL066W	HED1	Q03937	162 aa		7.6	□□□□□ -1.19
RGL1	YPL066W	PUS5	Q06244	254 aa		7.6	□□□□□ -1.19
RGL1	YPL066W	SPB4	P25808	606 aa	Predicted RBP	7.59	□□□□□ -1.19
RGL1	YPL066W	NIS1	P53939	407 aa		7.59	□□□□□ -1.19
RGL1	YPL066W	TEA1	P47988	759 aa		7.58	□□□□□ -1.2
RGL1	YPL066W	YNL115C	P53925	644 aa		7.58	□□□□□ -1.2
RGL1	YPL066W	SIT4	P20604	311 aa		7.57	□□□□□ -1.2
RGL1	YPL066W	GCR2	Q01722	534 aa		7.57	□□□□□ -1.2
RGL1	YPL066W	GAR1	P28007	205 aa	Known RBP	7.56	□□□□□ -1.2
RGL1	YPL066W	RTF1	P53064	558 aa		7.56	□□□□□ -1.2
RGL1	YPL066W	MET32	Q12041	191 aa		7.56	□□□□□ -1.2
RGL1	YPL066W	YPL062W	Q02781	134 aa		7.52	□□□□□ -1.21
RGL1	YPL066W	ASH1	P34233	588 aa		7.51	□□□□□ -1.21
RGL1	YPL066W	FPK1	P53739	893 aa		7.5	□□□□□ -1.21
RGL1	YPL066W	SLY41	P22215	453 aa		7.49	□□□□□ -1.21
RGL1	YPL066W	MET22	P32179	357 aa		7.49	□□□□□ -1.21
RGL1	YPL066W	SCJ1	P25303	377 aa		7.46	□□□□□ -1.21
RGL1	YPL066W	PDC1	P06169	563 aa	Known RBP	7.45	□□□□□ -1.22
RGL1	YPL066W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.45	□□□□□ -1.22	not detected
RGL1	YPL066W	KXD1	P53158	218 aa		7.45	□□□□□ -1.22
RGL1	YPL066W	YMR196W	Q04336	1088 aa		7.45	□□□□□ -1.22
RGL1	YPL066W	AFT1	P22149	690 aa		7.44	□□□□□ -1.22
RGL1	YPL066W	HXT10	P43581	546 aa		7.44	□□□□□ -1.22
RGL1	YPL066W	RRD1	P40454	393 aa	Known RBP	7.44	□□□□□ -1.22
RGL1	YPL066W	HST3	P53687	447 aa		7.43	□□□□□ -1.22
RGL1	YPL066W	ENV9	Q08651	330 aa		7.43	□□□□□ -1.22
RGL1	YPL066W	TPD3	P31383	635 aa		7.42	□□□□□ -1.22
RGL1	YPL066W	YDR444W	Q04093	687 aa		7.4	□□□□□ -1.22
RGL1	YPL066W	YDL206W	Q12424	762 aa		7.4	□□□□□ -1.22
RGL1	YPL066W	YJR115W	P47152	169 aa		7.39	□□□□□ -1.23
RGL1	YPL066W	TRM1	P15565	570 aa	Known RBP	7.37	□□□□□ -1.23
RGL1	YPL066W	PUS6	P53294	404 aa		7.37	□□□□□ -1.23
RGL1	YPL066W	HST2	P53686	357 aa		7.37	□□□□□ -1.23
RGL1	YPL066W	SYH1	Q02875	849 aa	Known RBP	7.37	□□□□□ -1.23
RGL1	YPL066W	TBF1	Q02457	562 aa		7.36	□□□□□ -1.23
RGL1	YPL066W	RPA14	P50106	137 aa		7.35	□□□□□ -1.23
RGL1	YPL066W	ESS1	P22696	170 aa		7.35	□□□□□ -1.23
RGL1	YPL066W	GLC3	P32775	704 aa		7.35	□□□□□ -1.23
RGL1	YPL066W	ATF2	P53296	535 aa		7.35	□□□□□ -1.23
RGL1	YPL066W	LCB5	Q06147	687 aa	Known RBP	7.35	□□□□□ -1.23
RGL1	YPL066W	ALR1	Q08269	859 aa		7.35	□□□□□ -1.23
RGL1	YPL066W	MMP1	Q12372	583 aa		7.35	□□□□□ -1.23
RGL1	YPL066W	YPR097W	Q06839	1073 aa		7.34	□□□□□ -1.23
RGL1	YPL066W	TYW1	Q08960	810 aa	Known RBP	7.34	□□□□□ -1.23
RGL1	YPL066W	YJU3	P28321	313 aa		7.32	□□□□□ -1.24
RGL1	YPL066W	KIP2	P28743	706 aa		7.32	□□□□□ -1.24
RGL1	YPL066W	YDL176W	Q12027	708 aa		7.32	□□□□□ -1.24
RGL1	YPL066W	GLN1	P32288	370 aa	Known RBP	7.31	□□□□□ -1.24
RGL1	YPL066W	MSB3	P48566	633 aa	Predicted RBP	7.3	□□□□□ -1.24
RGL1	YPL066W	IXR1	P33417	597 aa		7.29	□□□□□ -1.24
RGL1	YPL066W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.29	□□□□□ -1.24	not detected
RGL1	YPL066W	YNR021W	P53723	404 aa	Known RBP	7.28	□□□□□ -1.24
RGL1	YPL066W	UGA3	P26370	528 aa		7.27	□□□□□ -1.24
RGL1	YPL066W	KTR1	P27810	393 aa	Known RBP	7.27	□□□□□ -1.25
RGL1	YPL066W	PTK2	P47116	818 aa	Known RBP	7.26	□□□□□ -1.25
RGL1	YPL066W	ITT1	Q04638	464 aa		7.26	□□□□□ -1.25
RGL1	YPL066W	MRT4	P33201	236 aa	Known RBP	7.24	□□□□□ -1.25
RGL1	YPL066W	RSC30	P38781	883 aa		7.23	□□□□□ -1.25
RGL1	YPL066W	OPT2	Q06593	877 aa		7.22	□□□□□ -1.25
RGL1	YPL066W	PKH3	Q03306	898 aa	Predicted RBP	7.21	□□□□□ -1.25
RGL1	YPL066W	SRF1	Q12516	437 aa		7.21	□□□□□ -1.25
RGL1	YPL066W	VAC17	P25591	423 aa		7.2	□□□□□ -1.26
RGL1	YPL066W	CAF120	P53836	1060 aa		7.2	□□□□□ -1.26
RGL1	YPL066W	ARG8	P18544	423 aa		7.17	□□□□□ -1.26
RGL1	YPL066W	APP1	P53933	587 aa		7.17	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms