RNA–Protein interactions for RNA: YOR116C

RPO31, Transcript of RNA polymerase III largest subunit C160, yeast

Gene RPO31, Length 4,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPO31	YOR116C	IOC4	Q04213	475 aa		4.84	□□□□□ -1.63
RPO31	YOR116C	YLL066C	Q99208	1374 aa		4.84	□□□□□ -1.64
RPO31	YOR116C	LEO1	P38439	464 aa		4.83	□□□□□ -1.64
RPO31	YOR116C	RIX1	P38883	763 aa	Predicted RBP	4.83	□□□□□ -1.64
RPO31	YOR116C	NOP7	P53261	605 aa	Known RBP	4.83	□□□□□ -1.64
RPO31	YOR116C	NAP1	P25293	417 aa	Known RBP	4.82	□□□□□ -1.64
RPO31	YOR116C	PRP43	P53131	767 aa	Known RBP	4.82	□□□□□ -1.64
RPO31	YOR116C	EBP2	P36049	427 aa	Known RBP	4.81	□□□□□ -1.64
RPO31	YOR116C	YLR419W	Q06698	1435 aa	Known RBP	4.81	□□□□□ -1.64
RPO31	YOR116C	SEC3	P33332	1336 aa	Known RBP	4.81	□□□□□ -1.64
RPO31	YOR116C	YRF1-3	P0CX14	1859 aa		4.8	□□□□□ -1.64
RPO31	YOR116C	YRF1-7	P0CX15	1859 aa		4.8	□□□□□ -1.64
RPO31	YOR116C	YRF1-6	P53819	1859 aa		4.8	□□□□□ -1.64
RPO31	YOR116C	YNR029C	P53729	429 aa	Known RBP	4.8	□□□□□ -1.64
RPO31	YOR116C	COG8	Q04632	607 aa		4.8	□□□□□ -1.64
RPO31	YOR116C	ALD4	P46367	519 aa	Known RBP	4.79	□□□□□ -1.64
RPO31	YOR116C	MLP1	Q02455	1875 aa	Known RBP	4.78	□□□□□ -1.64
RPO31	YOR116C	ROM2	P51862	1356 aa	Known RBP	4.78	□□□□□ -1.64
RPO31	YOR116C	ESC2	Q06340	456 aa		4.78	□□□□□ -1.64
RPO31	YOR116C	RIM15	P43565	1770 aa		4.78	□□□□□ -1.64
RPO31	YOR116C	LEU3	P08638	886 aa		4.78	□□□□□ -1.64
RPO31	YOR116C	ESL2	P36168	1195 aa		4.78	□□□□□ -1.64
RPO31	YOR116C	TYS1	P36421	394 aa	Known RBP	4.78	□□□□□ -1.64
RPO31	YOR116C	GTT3	P39996	337 aa		4.77	□□□□□ -1.65
RPO31	YOR116C	THI12	P42883	340 aa		4.76	□□□□□ -1.65
RPO31	YOR116C	THI5	P43534	340 aa		4.76	□□□□□ -1.65
RPO31	YOR116C	THI11	P47183	340 aa		4.76	□□□□□ -1.65
RPO31	YOR116C	THI13	Q07748	340 aa		4.76	□□□□□ -1.65
RPO31	YOR116C	YIL177C	P40434	1758 aa		4.75	□□□□□ -1.65
RPO31	YOR116C	YJL225C	P40889	1758 aa		4.75	□□□□□ -1.65
RPO31	YOR116C	SIS2	P36024	562 aa		4.75	□□□□□ -1.65
RPO31	YOR116C	UTP10	P42945	1769 aa	Known RBP	4.75	□□□□□ -1.65
RPO31	YOR116C	RAD9	P14737	1309 aa		4.74	□□□□□ -1.65
RPO31	YOR116C	SIR4	P11978	1358 aa		4.73	□□□□□ -1.65
RPO31	YOR116C	YEF3	P16521	1044 aa	Known RBP	4.73	□□□□□ -1.65
RPO31	YOR116C	MRX12	P47084	519 aa		4.73	□□□□□ -1.65
RPO31	YOR116C	RSF2	P46974	1380 aa		4.72	□□□□□ -1.65
RPO31	YOR116C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
RPO31	YOR116C	YMR074C	Q04773	145 aa		4.71	□□□□□ -1.66
RPO31	YOR116C	YPR148C	Q06523	435 aa		4.69	□□□□□ -1.66
RPO31	YOR116C	KRE5	P22023	1365 aa		4.69	□□□□□ -1.66
RPO31	YOR116C	CPS1	P27614	576 aa		4.69	□□□□□ -1.66
RPO31	YOR116C	YFR016C	P43597	1233 aa	Known RBP	4.69	□□□□□ -1.66
RPO31	YOR116C	SPT7	P35177	1332 aa		4.68	□□□□□ -1.66
RPO31	YOR116C	DEF1	P35732	738 aa	Known RBP	4.67	□□□□□ -1.66
RPO31	YOR116C	CLC1	P17891	233 aa		4.66	□□□□□ -1.66
RPO31	YOR116C	YIL055C	P40523	627 aa	Known RBP	4.66	□□□□□ -1.66
RPO31	YOR116C	RIA1	P53893	1110 aa		4.66	□□□□□ -1.66
RPO31	YOR116C	GLN1	P32288	370 aa	Known RBP	4.65	□□□□□ -1.66
RPO31	YOR116C	MTR4	P47047	1073 aa	Known RBP	4.65	□□□□□ -1.66
RPO31	YOR116C	LYS2	P07702	1392 aa		4.64	□□□□□ -1.67
RPO31	YOR116C	NOP58	Q12499	511 aa	Known RBP	4.64	□□□□□ -1.67
RPO31	YOR116C	MHP1	P43638	1398 aa		4.64	□□□□□ -1.67
RPO31	YOR116C	RPS9B	P05755	195 aa	Known RBP	4.63	□□□□□ -1.67
RPO31	YOR116C	ORC1	P54784	914 aa	Predicted RBP	4.63	□□□□□ -1.67
RPO31	YOR116C	FPR4	Q06205	392 aa	Predicted RBP	4.63	□□□□□ -1.67
RPO31	YOR116C	YML133C	Q03099	1374 aa		4.63	□□□□□ -1.67
RPO31	YOR116C	YLL067C	Q07888	1374 aa		4.63	□□□□□ -1.67
RPO31	YOR116C	JIP3	O13555	125 aa		4.62	□□□□□ -1.67
RPO31	YOR116C	CTF4	Q01454	927 aa		4.62	□□□□□ -1.67
RPO31	YOR116C	TAP42	Q04372	366 aa		4.62	□□□□□ -1.67
RPO31	YOR116C	RPC31	P17890	251 aa		4.62	□□□□□ -1.67
RPO31	YOR116C	IMH1	Q06704	911 aa	Known RBP	4.62	□□□□□ -1.67
RPO31	YOR116C	YRB30	P53107	440 aa	Predicted RBP	4.61	□□□□□ -1.67
RPO31	YOR116C	BTN2	P53286	410 aa		4.6	□□□□□ -1.67
RPO31	YOR116C	CDC11	P32458	415 aa		4.6	□□□□□ -1.67
RPO31	YOR116C	KRI1	P42846	591 aa	Known RBP	4.6	□□□□□ -1.67
RPO31	YOR116C	RPS0B	P46654	252 aa	Known RBP	4.6	□□□□□ -1.67
RPO31	YOR116C	REB1	P21538	810 aa		4.6	□□□□□ -1.67
RPO31	YOR116C	UBP1	P25037	809 aa		4.6	□□□□□ -1.67
RPO31	YOR116C	GRX4	P32642	244 aa		4.59	□□□□□ -1.67
RPO31	YOR116C	RAD2	P07276	1031 aa		4.59	□□□□□ -1.67
RPO31	YOR116C	HSP82	P02829	709 aa	Known RBP	4.59	□□□□□ -1.68
RPO31	YOR116C	TCB2	P48231	1178 aa		4.59	□□□□□ -1.68
RPO31	YOR116C	YRF1-4	O13559	1382 aa		4.58	□□□□□ -1.68
RPO31	YOR116C	RPO41	P13433	1351 aa	Known RBP	4.58	□□□□□ -1.68
RPO31	YOR116C	PRI1	P10363	409 aa		4.58	□□□□□ -1.68
RPO31	YOR116C	CAB1	Q04430	367 aa		4.58	□□□□□ -1.68
RPO31	YOR116C	ENV9	Q08651	330 aa		4.58	□□□□□ -1.68
RPO31	YOR116C	FKH1	P40466	484 aa		4.57	□□□□□ -1.68
RPO31	YOR116C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
RPO31	YOR116C	TPM2	P40414	161 aa		4.57	□□□□□ -1.68
RPO31	YOR116C	SPT2	P06843	333 aa	Predicted RBP	4.57	□□□□□ -1.68
RPO31	YOR116C	SLM3	Q12093	417 aa		4.57	□□□□□ -1.68
RPO31	YOR116C	LEU2	P04173	364 aa	Predicted RBP	4.56	□□□□□ -1.68
RPO31	YOR116C	VPS24	P36095	224 aa	Known RBP	4.56	□□□□□ -1.68
RPO31	YOR116C	NOP8	Q08287	484 aa	Predicted RBP	4.56	□□□□□ -1.68
RPO31	YOR116C	ENT1	Q12518	454 aa		4.56	□□□□□ -1.68
RPO31	YOR116C	MEC3	Q02574	474 aa		4.56	□□□□□ -1.68
RPO31	YOR116C	PRP5	P21372	849 aa	Predicted RBP	4.55	□□□□□ -1.68
RPO31	YOR116C	ECM16	Q04217	1267 aa	Known RBP	4.55	□□□□□ -1.68
RPO31	YOR116C	FIG2	P25653	1609 aa		4.55	□□□□□ -1.68
RPO31	YOR116C	SPE2	P21182	396 aa		4.55	□□□□□ -1.68
RPO31	YOR116C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RPO31	YOR116C	TAF8	Q03750	510 aa		4.54	□□□□□ -1.68
RPO31	YOR116C	TCB1	Q12466	1186 aa		4.54	□□□□□ -1.68
RPO31	YOR116C	ETT1	Q08421	412 aa	Known RBP	4.53	□□□□□ -1.68
RPO31	YOR116C	TPM1	P17536	199 aa	Known RBP	4.53	□□□□□ -1.68
RPO31	YOR116C	MIC60	P36112	540 aa		4.53	□□□□□ -1.68
RPO31	YOR116C	MDG1	P53885	366 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms