RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W SEC2P17065 759 aa8.72□□□□□ -1.01
BUD21YOR078W CST6P40535 587 aa8.72□□□□□ -1.01
BUD21YOR078W MVP1P40959 511 aaKnown RBP8.72□□□□□ -1.01
BUD21YOR078W NPL4P33755 580 aa8.71□□□□□ -1.02
BUD21YOR078W MAK21Q12176 1025 aaKnown RBP8.71□□□□□ -1.02
BUD21YOR078W GCD11P32481 527 aaKnown RBP8.7□□□□□ -1.02
BUD21YOR078W AIR1P40507 360 aaKnown RBP8.68□□□□□ -1.02
BUD21YOR078W CLA4P48562 842 aa8.68□□□□□ -1.02
BUD21YOR078W RGR1P19263 1082 aa8.66□□□□□ -1.02
BUD21YOR078W YPR109WQ06104 294 aa8.66□□□□□ -1.02
BUD21YOR078W LAM6Q08001 693 aa8.65□□□□□ -1.02
BUD21YOR078W SPT16P32558 1035 aaKnown RBP8.64□□□□□ -1.03
BUD21YOR078W RRN7P40992 514 aa8.6□□□□□ -1.03
BUD21YOR078W BRE2P43132 505 aa8.59□□□□□ -1.03
BUD21YOR078W FRK1Q03002 865 aaPredicted RBP8.59□□□□□ -1.03
BUD21YOR078W ERF2Q06551 359 aa8.58□□□□□ -1.04
BUD21YOR078W BDP1P46678 594 aa8.56□□□□□ -1.04
BUD21YOR078W KEX2P13134 814 aa8.55□□□□□ -1.04
BUD21YOR078W YPL062WQ02781 134 aa8.53□□□□□ -1.04
BUD21YOR078W CDC4P07834 779 aa8.52□□□□□ -1.05
BUD21YOR078W PAT1P25644 796 aaKnown RBP8.52□□□□□ -1.05
BUD21YOR078W PBS2P08018 668 aa8.51□□□□□ -1.05
BUD21YOR078W GCR2Q01722 534 aa8.5□□□□□ -1.05
BUD21YOR078W CKB1P43639 278 aa8.49□□□□□ -1.05
BUD21YOR078W PSE1P32337 1089 aaKnown RBP8.48□□□□□ -1.05
BUD21YOR078W PAC1P39946 494 aaKnown RBP8.47□□□□□ -1.05
BUD21YOR078W HED1Q03937 162 aa8.46□□□□□ -1.06
BUD21YOR078W GAR1P28007 205 aaKnown RBP8.45□□□□□ -1.06
BUD21YOR078W MOD5P07884 428 aa8.44□□□□□ -1.06
BUD21YOR078W AGE1Q04412 482 aa8.44□□□□□ -1.06
BUD21YOR078W TUB4P53378 473 aa8.41□□□□□ -1.06
BUD21YOR078W CLB5P30283 435 aa8.4□□□□□ -1.06
BUD21YOR078W MAM3Q12296 706 aa8.4□□□□□ -1.06
BUD21YOR078W MET22P32179 357 aa8.39□□□□□ -1.07
BUD21YOR078W MET32Q12041 191 aa8.38□□□□□ -1.07
BUD21YOR078W GBP2P25555 427 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07 RIP-Chip
BUD21YOR078W DSF2P38213 736 aa8.36□□□□□ -1.07
BUD21YOR078W IES2P40154 320 aa8.36□□□□□ -1.07
BUD21YOR078W RTF1P53064 558 aa8.36□□□□□ -1.07
BUD21YOR078W PUS5Q06244 254 aa8.36□□□□□ -1.07
BUD21YOR078W YNL115CP53925 644 aa8.35□□□□□ -1.07
BUD21YOR078W ASH1P34233 588 aa8.34□□□□□ -1.07
BUD21YOR078W ENV9Q08651 330 aa8.34□□□□□ -1.07
BUD21YOR078W SIT4P20604 311 aa8.33□□□□□ -1.08
BUD21YOR078W NUP42P49686 430 aaKnown RBP8.32□□□□□ -1.08
BUD21YOR078W AFT1P22149 690 aa8.31□□□□□ -1.08
BUD21YOR078W SAS10Q12136 610 aaPredicted RBP8.31□□□□□ -1.08
BUD21YOR078W TEA1P47988 759 aa8.29□□□□□ -1.08
BUD21YOR078W NIS1P53939 407 aa8.29□□□□□ -1.08
BUD21YOR078W YDR444WQ04093 687 aa8.29□□□□□ -1.08
BUD21YOR078W HST3P53687 447 aa8.27□□□□□ -1.09
BUD21YOR078W DIT2P21595 489 aa8.24□□□□□ -1.09
BUD21YOR078W LCB5Q06147 687 aaKnown RBP8.24□□□□□ -1.09
BUD21YOR078W TPD3P31383 635 aa8.23□□□□□ -1.09
BUD21YOR078W KXD1P53158 218 aa8.23□□□□□ -1.09
BUD21YOR078W PDC1P06169 563 aaKnown RBP8.21□□□□□ -1.1
BUD21YOR078W DMA1P38823 416 aa8.21□□□□□ -1.1
BUD21YOR078W RRD1P40454 393 aaKnown RBP8.21□□□□□ -1.1
BUD21YOR078W HXT10P43581 546 aa8.21□□□□□ -1.1
BUD21YOR078W YJR115WP47152 169 aa8.21□□□□□ -1.1
BUD21YOR078W YDL176WQ12027 708 aa8.21□□□□□ -1.1
BUD21YOR078W FPK1P53739 893 aa8.2□□□□□ -1.1
BUD21YOR078W SLY41P22215 453 aa8.18□□□□□ -1.1
BUD21YOR078W SPB4P25808 606 aaPredicted RBP8.17□□□□□ -1.1
BUD21YOR078W SYH1Q02875 849 aaKnown RBP8.16□□□□□ -1.1
BUD21YOR078W YMR196WQ04336 1088 aa8.14□□□□□ -1.11
BUD21YOR078W MSB3P48566 633 aaPredicted RBP8.13□□□□□ -1.11
BUD21YOR078W SCJ1P25303 377 aa8.11□□□□□ -1.11
BUD21YOR078W RPA14P50106 137 aa8.11□□□□□ -1.11
BUD21YOR078W YDL206WQ12424 762 aa8.11□□□□□ -1.11
BUD21YOR078W PUS6P53294 404 aa8.1□□□□□ -1.11
BUD21YOR078W YPR097WQ06839 1073 aa8.1□□□□□ -1.11
BUD21YOR078W ALR1Q08269 859 aa8.09□□□□□ -1.11
BUD21YOR078W TBF1Q02457 562 aa8.08□□□□□ -1.12
BUD21YOR078W TRM1P15565 570 aaKnown RBP8.07□□□□□ -1.12
BUD21YOR078W HST2P53686 357 aa8.07□□□□□ -1.12
BUD21YOR078W UGA3P26370 528 aa8.06□□□□□ -1.12
BUD21YOR078W KIP2P28743 706 aa8.06□□□□□ -1.12
BUD21YOR078W PTK2P47116 818 aaKnown RBP8.06□□□□□ -1.12
BUD21YOR078W IXR1P33417 597 aa8.04□□□□□ -1.12
BUD21YOR078W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
BUD21YOR078W MRT4P33201 236 aaKnown RBP8.03□□□□□ -1.12
BUD21YOR078W OPT2Q06593 877 aa8.03□□□□□ -1.12
BUD21YOR078W CAF120P53836 1060 aa8.02□□□□□ -1.13
BUD21YOR078W MMP1Q12372 583 aa8.02□□□□□ -1.13
BUD21YOR078W ACO2P39533 789 aa8.01□□□□□ -1.13
BUD21YOR078W SRF1Q12516 437 aa8□□□□□ -1.13
BUD21YOR078W ESS1P22696 170 aa7.98□□□□□ -1.13
BUD21YOR078W GLN1P32288 370 aaKnown RBP7.97□□□□□ -1.13
BUD21YOR078W NUP85P46673 744 aa7.96□□□□□ -1.14
BUD21YOR078W ATF2P53296 535 aa7.96□□□□□ -1.14
BUD21YOR078W YJU3P28321 313 aa7.95□□□□□ -1.14
BUD21YOR078W YLR346CQ06139 101 aa7.95□□□□□ -1.14
BUD21YOR078W GLY1P37303 387 aaKnown RBP7.94□□□□□ -1.14
BUD21YOR078W VAC17P25591 423 aa7.93□□□□□ -1.14
BUD21YOR078W TYW1Q08960 810 aaKnown RBP7.93□□□□□ -1.14
BUD21YOR078W GLC3P32775 704 aa7.91□□□□□ -1.14
BUD21YOR078W RSC30P38781 883 aa7.91□□□□□ -1.14
BUD21YOR078W RTT106P40161 455 aa7.91□□□□□ -1.14
BUD21YOR078W YIR007WP40566 764 aa7.9□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms