RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W LSP1Q12230 341 aaKnown RBP5.49□□□□□ -1.53
PEP5YMR231W RPC31P17890 251 aa5.49□□□□□ -1.53
PEP5YMR231W CKB1P43639 278 aa5.48□□□□□ -1.53
PEP5YMR231W RVB2Q12464 471 aaKnown RBP5.48□□□□□ -1.53
PEP5YMR231W TY1B-NL2Q99337 1749 aaKnown RBP5.48□□□□□ -1.53
PEP5YMR231W BUD27P43573 796 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
PEP5YMR231W YPR148CQ06523 435 aa5.47□□□□□ -1.53
PEP5YMR231W KRE5P22023 1365 aa5.47□□□□□ -1.53
PEP5YMR231W PSK1P31374 1356 aa5.46□□□□□ -1.54
PEP5YMR231W YFR016CP43597 1233 aaKnown RBP5.46□□□□□ -1.54
PEP5YMR231W NST1P53935 1240 aa5.45□□□□□ -1.54
PEP5YMR231W YEF3P16521 1044 aaKnown RBP5.44□□□□□ -1.54
PEP5YMR231W ROX1P25042 368 aa5.44□□□□□ -1.54
PEP5YMR231W SUI2P20459 304 aaKnown RBP5.42□□□□□ -1.54
PEP5YMR231W EAF7P53911 425 aaKnown RBP5.42□□□□□ -1.54
PEP5YMR231W FPR3P38911 411 aaKnown RBP5.42□□□□□ -1.54
PEP5YMR231W KIP3P53086 805 aaKnown RBP5.42□□□□□ -1.54
PEP5YMR231W TAP42Q04372 366 aa5.42□□□□□ -1.54
PEP5YMR231W NOT3P06102 836 aaKnown RBP5.42□□□□□ -1.54
PEP5YMR231W SPE2P21182 396 aa5.42□□□□□ -1.54
PEP5YMR231W YRF1-2P40105 1681 aa5.41□□□□□ -1.54
PEP5YMR231W RRP5Q05022 1729 aaKnown RBP5.4□□□□□ -1.54
PEP5YMR231W PIL1P53252 339 aaKnown RBP5.4□□□□□ -1.54
PEP5YMR231W YAP3P38749 330 aa5.4□□□□□ -1.55
PEP5YMR231W TAF5P38129 798 aa5.39□□□□□ -1.55
PEP5YMR231W ALD4P46367 519 aaKnown RBP5.39□□□□□ -1.55
PEP5YMR231W YDL144CQ07589 356 aa5.39□□□□□ -1.55
PEP5YMR231W URB1P34241 1764 aaKnown RBP5.39□□□□□ -1.55
PEP5YMR231W RQC2Q12532 1038 aaKnown RBP5.39□□□□□ -1.55
PEP5YMR231W HEF3P53978 1044 aaKnown RBP5.38□□□□□ -1.55
PEP5YMR231W PCT1P13259 424 aa5.38□□□□□ -1.55
PEP5YMR231W ECM16Q04217 1267 aaKnown RBP5.38□□□□□ -1.55
PEP5YMR231W YIL092WP40497 633 aa5.37□□□□□ -1.55
PEP5YMR231W VPS24P36095 224 aaKnown RBP5.37□□□□□ -1.55
PEP5YMR231W RRP46P53256 223 aaPredicted RBP5.37□□□□□ -1.55
PEP5YMR231W HAP5Q02516 242 aa5.37□□□□□ -1.55
PEP5YMR231W AUS1Q08409 1394 aa5.36□□□□□ -1.55
PEP5YMR231W URN1Q06525 465 aaKnown RBP5.36□□□□□ -1.55
PEP5YMR231W MSP1P28737 362 aa5.36□□□□□ -1.55
PEP5YMR231W RTG3P38165 486 aa5.36□□□□□ -1.55
PEP5YMR231W TRK1P12685 1235 aa5.35□□□□□ -1.55
PEP5YMR231W BNI1P41832 1953 aa5.35□□□□□ -1.55
PEP5YMR231W DUR1,2P32528 1835 aaKnown RBP5.35□□□□□ -1.55
PEP5YMR231W RAD2P07276 1031 aa5.34□□□□□ -1.55
PEP5YMR231W IPL1P38991 367 aa5.34□□□□□ -1.55
PEP5YMR231W SLN1P39928 1220 aaPredicted RBP5.34□□□□□ -1.55
PEP5YMR231W PRP43P53131 767 aaKnown RBP5.34□□□□□ -1.55
PEP5YMR231W HYR1P40581 163 aaKnown RBP5.34□□□□□ -1.55
PEP5YMR231W SAP155P43612 1002 aa5.34□□□□□ -1.56
PEP5YMR231W RPO41P13433 1351 aaKnown RBP5.33□□□□□ -1.56
PEP5YMR231W QCR6P00127 147 aa5.33□□□□□ -1.56
PEP5YMR231W PRD1P25375 712 aa5.33□□□□□ -1.56
PEP5YMR231W NUP145P49687 1317 aa5.33□□□□□ -1.56
PEP5YMR231W GRX4P32642 244 aa5.32□□□□□ -1.56
PEP5YMR231W AIM44Q99299 758 aa5.32□□□□□ -1.56
PEP5YMR231W LYS2P07702 1392 aa5.32□□□□□ -1.56
PEP5YMR231W LEU3P08638 886 aa5.32□□□□□ -1.56
PEP5YMR231W RAD9P14737 1309 aa5.32□□□□□ -1.56
PEP5YMR231W NAP1P25293 417 aaKnown RBP5.31□□□□□ -1.56
PEP5YMR231W POL32P47110 350 aa5.31□□□□□ -1.56
PEP5YMR231W THI22Q06490 572 aa5.31□□□□□ -1.56
PEP5YMR231W MAK21Q12176 1025 aaKnown RBP5.31□□□□□ -1.56
PEP5YMR231W RLF2Q12495 606 aa5.31□□□□□ -1.56
PEP5YMR231W ADE6P38972 1358 aaKnown RBP5.31□□□□□ -1.56
PEP5YMR231W KRE33P53914 1056 aaKnown RBP5.3□□□□□ -1.56
PEP5YMR231W RAD50P12753 1312 aa5.3□□□□□ -1.56
PEP5YMR231W CHZ1P40019 153 aaPredicted RBP5.3□□□□□ -1.56
PEP5YMR231W HGH1P48362 394 aaKnown RBP5.3□□□□□ -1.56
PEP5YMR231W YIL177CP40434 1758 aa5.3□□□□□ -1.56
PEP5YMR231W YJL225CP40889 1758 aa5.3□□□□□ -1.56
PEP5YMR231W RRT14P40470 206 aa5.29□□□□□ -1.56
PEP5YMR231W ROM2P51862 1356 aaKnown RBP5.29□□□□□ -1.56
PEP5YMR231W TY4B-HP0C2J7 1802 aa5.29□□□□□ -1.56
PEP5YMR231W TY4B-JP47024 1803 aa5.29□□□□□ -1.56
PEP5YMR231W MNN4P36044 1178 aa5.29□□□□□ -1.56
PEP5YMR231W BDH2P39713 417 aa5.29□□□□□ -1.56
PEP5YMR231W MPE1P35728 441 aaKnown RBP5.29□□□□□ -1.56
PEP5YMR231W MPP10P47083 593 aaKnown RBP5.29□□□□□ -1.56
PEP5YMR231W KNS1P32350 737 aaPredicted RBP5.28□□□□□ -1.56
PEP5YMR231W TEA1P47988 759 aa5.28□□□□□ -1.56
PEP5YMR231W TAF8Q03750 510 aa5.28□□□□□ -1.56
PEP5YMR231W FKS3Q04952 1785 aa5.27□□□□□ -1.57
PEP5YMR231W CDC16P09798 840 aa5.27□□□□□ -1.57
PEP5YMR231W RTR1P40084 226 aaPredicted RBP5.27□□□□□ -1.57
PEP5YMR231W DIP2Q12220 943 aaPredicted RBP5.27□□□□□ -1.57
PEP5YMR231W PDI1P17967 522 aaKnown RBP5.25□□□□□ -1.57
PEP5YMR231W RPN1P38764 993 aaKnown RBP5.25□□□□□ -1.57
PEP5YMR231W MAM1P40065 302 aa5.25□□□□□ -1.57
PEP5YMR231W MTR4P47047 1073 aaKnown RBP5.25□□□□□ -1.57
PEP5YMR231W YNL050CP53952 270 aa5.25□□□□□ -1.57
PEP5YMR231W RPS19AP07280 144 aaKnown RBP5.24□□□□□ -1.57
PEP5YMR231W RPS19BP07281 144 aaPredicted RBP5.24□□□□□ -1.57
PEP5YMR231W ARL1P38116 183 aaKnown RBP5.24□□□□□ -1.57
PEP5YMR231W KRI1P42846 591 aaKnown RBP5.24□□□□□ -1.57
PEP5YMR231W TYS1P36421 394 aaKnown RBP5.23□□□□□ -1.57
PEP5YMR231W HST1P53685 503 aa5.23□□□□□ -1.57
PEP5YMR231W ELM1P32801 640 aa5.23□□□□□ -1.57
PEP5YMR231W ORC1P54784 914 aaPredicted RBP5.23□□□□□ -1.57
PEP5YMR231W GCD7P32502 381 aaPredicted RBP5.22□□□□□ -1.57
PEP5YMR231W TAF13P11747 167 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms