RNA–Protein interactions for RNA: YMR179W

SPT21, Transcript of Protein with a role in transcriptional silencing, yeast

Gene SPT21, Length 2,277 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT21	YMR179W	TY1A-ML1	Q04706	440 aa	Known RBP	4.16	□□□□□ -1.74
SPT21	YMR179W	YPR109W	Q06104	294 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-BR	Q12217	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-NL2	Q12470	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	TY1A-GR2	Q12485	440 aa		4.16	□□□□□ -1.74
SPT21	YMR179W	PSE1	P32337	1089 aa	Known RBP	4.15	□□□□□ -1.74
SPT21	YMR179W	MRF1	P30775	413 aa	Predicted RBP	4.14	□□□□□ -1.75
SPT21	YMR179W	NPL4	P33755	580 aa		4.14	□□□□□ -1.75
SPT21	YMR179W	MAM3	Q12296	706 aa		4.14	□□□□□ -1.75
SPT21	YMR179W	YEL077C	Q3E7X8	1277 aa		4.13	□□□□□ -1.75
SPT21	YMR179W	GCD11	P32481	527 aa	Known RBP	4.12	□□□□□ -1.75
SPT21	YMR179W	NUP42	P49686	430 aa	Known RBP	4.12	□□□□□ -1.75
SPT21	YMR179W	IES2	P40154	320 aa		4.11	□□□□□ -1.75
SPT21	YMR179W	CST6	P40535	587 aa		4.1	□□□□□ -1.75
SPT21	YMR179W	ERF2	Q06551	359 aa		4.1	□□□□□ -1.75
SPT21	YMR179W	ERG12	P07277	443 aa		4.1	□□□□□ -1.75
SPT21	YMR179W	TRK1	P12685	1235 aa		4.1	□□□□□ -1.75
SPT21	YMR179W	CLB5	P30283	435 aa		4.1	□□□□□ -1.75
SPT21	YMR179W	KEX2	P13134	814 aa		4.09	□□□□□ -1.75
SPT21	YMR179W	SPT16	P32558	1035 aa	Known RBP	4.09	□□□□□ -1.75
SPT21	YMR179W	RRN7	P40992	514 aa		4.09	□□□□□ -1.76
SPT21	YMR179W	DIT2	P21595	489 aa		4.08	□□□□□ -1.76
SPT21	YMR179W	SPB4	P25808	606 aa	Predicted RBP	4.08	□□□□□ -1.76
SPT21	YMR179W	LAM6	Q08001	693 aa		4.08	□□□□□ -1.76
SPT21	YMR179W	RGA1	P39083	1007 aa		4.07	□□□□□ -1.76
SPT21	YMR179W	AGE1	Q04412	482 aa		4.07	□□□□□ -1.76
SPT21	YMR179W	SIT4	P20604	311 aa		4.06	□□□□□ -1.76
SPT21	YMR179W	CLA4	P48562	842 aa		4.06	□□□□□ -1.76
SPT21	YMR179W	RTF1	P53064	558 aa		4.06	□□□□□ -1.76
SPT21	YMR179W	TEA1	P47988	759 aa		4.05	□□□□□ -1.76
SPT21	YMR179W	MOD5	P07884	428 aa		4.05	□□□□□ -1.76
SPT21	YMR179W	PAT1	P25644	796 aa	Known RBP	4.05	□□□□□ -1.76
SPT21	YMR179W	PAC1	P39946	494 aa	Known RBP	4.05	□□□□□ -1.76
SPT21	YMR179W	AIR1	P40507	360 aa	Known RBP	4.05	□□□□□ -1.76
SPT21	YMR179W	BDP1	P46678	594 aa		4.05	□□□□□ -1.76
SPT21	YMR179W	NIS1	P53939	407 aa		4.05	□□□□□ -1.76
SPT21	YMR179W	TUB4	P53378	473 aa		4.04	□□□□□ -1.76
SPT21	YMR179W	YNL115C	P53925	644 aa		4.04	□□□□□ -1.76
SPT21	YMR179W	FRK1	Q03002	865 aa	Predicted RBP	4.04	□□□□□ -1.76
SPT21	YMR179W	FPK1	P53739	893 aa		4.01	□□□□□ -1.77
SPT21	YMR179W	HED1	Q03937	162 aa		4.01	□□□□□ -1.77
SPT21	YMR179W	CDC4	P07834	779 aa		4	□□□□□ -1.77
SPT21	YMR179W	BRE2	P43132	505 aa		3.98	□□□□□ -1.77
SPT21	YMR179W	TPD3	P31383	635 aa		3.98	□□□□□ -1.77
SPT21	YMR179W	YNR021W	P53723	404 aa	Known RBP	3.97	□□□□□ -1.77
SPT21	YMR179W	SLY41	P22215	453 aa		3.97	□□□□□ -1.77
SPT21	YMR179W	HST2	P53686	357 aa		3.97	□□□□□ -1.77
SPT21	YMR179W	YMR196W	Q04336	1088 aa		3.96	□□□□□ -1.78
SPT21	YMR179W	PUS5	Q06244	254 aa		3.96	□□□□□ -1.78
SPT21	YMR179W	PDC1	P06169	563 aa	Known RBP	3.96	□□□□□ -1.78
SPT21	YMR179W	SCJ1	P25303	377 aa		3.96	□□□□□ -1.78
SPT21	YMR179W	HXT10	P43581	546 aa		3.96	□□□□□ -1.78
SPT21	YMR179W	MET32	Q12041	191 aa		3.96	□□□□□ -1.78
SPT21	YMR179W	GLC3	P32775	704 aa		3.95	□□□□□ -1.78
SPT21	YMR179W	RRD1	P40454	393 aa	Known RBP	3.95	□□□□□ -1.78
SPT21	YMR179W	KXD1	P53158	218 aa		3.95	□□□□□ -1.78
SPT21	YMR179W	ATF2	P53296	535 aa		3.95	□□□□□ -1.78
SPT21	YMR179W	GCR2	Q01722	534 aa		3.95	□□□□□ -1.78
SPT21	YMR179W	PUS6	P53294	404 aa		3.94	□□□□□ -1.78
SPT21	YMR179W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.93	□□□□□ -1.78	not detected
SPT21	YMR179W	RPA14	P50106	137 aa		3.93	□□□□□ -1.78
SPT21	YMR179W	RQC2	Q12532	1038 aa	Known RBP	3.93	□□□□□ -1.78
SPT21	YMR179W	TRM1	P15565	570 aa	Known RBP	3.93	□□□□□ -1.78
SPT21	YMR179W	AFT1	P22149	690 aa		3.93	□□□□□ -1.78
SPT21	YMR179W	YPR097W	Q06839	1073 aa		3.93	□□□□□ -1.78
SPT21	YMR179W	MMP1	Q12372	583 aa		3.93	□□□□□ -1.78
SPT21	YMR179W	ASH1	P34233	588 aa		3.92	□□□□□ -1.78
SPT21	YMR179W	AIM7	Q12156	149 aa		3.92	□□□□□ -1.78
SPT21	YMR179W	YDL206W	Q12424	762 aa		3.92	□□□□□ -1.78
SPT21	YMR179W	GLN1	P32288	370 aa	Known RBP	3.92	□□□□□ -1.78
SPT21	YMR179W	ALR1	Q08269	859 aa		3.91	□□□□□ -1.78
SPT21	YMR179W	ESS1	P22696	170 aa		3.91	□□□□□ -1.78
SPT21	YMR179W	KTR1	P27810	393 aa	Known RBP	3.91	□□□□□ -1.78
SPT21	YMR179W	MET22	P32179	357 aa		3.9	□□□□□ -1.79
SPT21	YMR179W	TBF1	Q02457	562 aa		3.9	□□□□□ -1.79
SPT21	YMR179W	SYH1	Q02875	849 aa	Known RBP	3.9	□□□□□ -1.79
SPT21	YMR179W	TYW1	Q08960	810 aa	Known RBP	3.9	□□□□□ -1.79
SPT21	YMR179W	YJU3	P28321	313 aa		3.9	□□□□□ -1.79
SPT21	YMR179W	RSC30	P38781	883 aa		3.9	□□□□□ -1.79
SPT21	YMR179W	HST3	P53687	447 aa		3.89	□□□□□ -1.79
SPT21	YMR179W	YPL062W	Q02781	134 aa		3.89	□□□□□ -1.79
SPT21	YMR179W	ENV9	Q08651	330 aa		3.89	□□□□□ -1.79
SPT21	YMR179W	GAR1	P28007	205 aa	Known RBP	3.87	□□□□□ -1.79
SPT21	YMR179W	YJR115W	P47152	169 aa		3.87	□□□□□ -1.79
SPT21	YMR179W	MSB3	P48566	633 aa	Predicted RBP	3.87	□□□□□ -1.79
SPT21	YMR179W	MRT4	P33201	236 aa	Known RBP	3.86	□□□□□ -1.79
SPT21	YMR179W	KIP2	P28743	706 aa		3.86	□□□□□ -1.79
SPT21	YMR179W	CSN12	P47130	423 aa		3.86	□□□□□ -1.79
SPT21	YMR179W	YDR444W	Q04093	687 aa		3.86	□□□□□ -1.79
SPT21	YMR179W	LCB5	Q06147	687 aa	Known RBP	3.86	□□□□□ -1.79
SPT21	YMR179W	VAC17	P25591	423 aa		3.85	□□□□□ -1.79
SPT21	YMR179W	IXR1	P33417	597 aa		3.85	□□□□□ -1.79
SPT21	YMR179W	PKH3	Q03306	898 aa	Predicted RBP	3.85	□□□□□ -1.79
SPT21	YMR179W	LEU3	P08638	886 aa		3.84	□□□□□ -1.79
SPT21	YMR179W	YDL176W	Q12027	708 aa		3.83	□□□□□ -1.8
SPT21	YMR179W	ARG8	P18544	423 aa		3.82	□□□□□ -1.8
SPT21	YMR179W	UGA3	P26370	528 aa		3.82	□□□□□ -1.8
SPT21	YMR179W	PTK2	P47116	818 aa	Known RBP	3.82	□□□□□ -1.8
SPT21	YMR179W	KIN1	P13185	1064 aa		3.82	□□□□□ -1.8
SPT21	YMR179W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms