RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C TY1A-ORP0CX59 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-PR2P0CX60 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-DR5P0CX65 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-ER2P0CX66 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-GR3P0CX67 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-LR1P0CX68 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-MR2P0CX69 440 aa6.65□□□□□ -1.34
UBX4YMR067C GCD11P32481 527 aaKnown RBP6.65□□□□□ -1.34
UBX4YMR067C TY1A-JR2P47099 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-DR1Q03856 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-ML1Q04706 440 aaKnown RBP6.65□□□□□ -1.34
UBX4YMR067C TY1A-BRQ12217 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-NL2Q12470 440 aa6.65□□□□□ -1.34
UBX4YMR067C TY1A-GR2Q12485 440 aa6.65□□□□□ -1.34
UBX4YMR067C YEL077CQ3E7X8 1277 aa6.65□□□□□ -1.34
UBX4YMR067C SEC2P17065 759 aa6.64□□□□□ -1.35
UBX4YMR067C AMS1P22855 1083 aa6.64□□□□□ -1.35
UBX4YMR067C SIT4P20604 311 aa6.63□□□□□ -1.35
UBX4YMR067C SDH2P21801 266 aa6.63□□□□□ -1.35
UBX4YMR067C PAT1P25644 796 aaKnown RBP6.62□□□□□ -1.35
UBX4YMR067C ATF2P53296 535 aa6.62□□□□□ -1.35
UBX4YMR067C AIM7Q12156 149 aa6.62□□□□□ -1.35
UBX4YMR067C KEX2P13134 814 aa6.61□□□□□ -1.35
UBX4YMR067C SPT16P32558 1035 aaKnown RBP6.61□□□□□ -1.35
UBX4YMR067C ERG12P07277 443 aa6.6□□□□□ -1.35
UBX4YMR067C NIS1P53939 407 aa6.6□□□□□ -1.35
UBX4YMR067C GLC3P32775 704 aa6.59□□□□□ -1.35
UBX4YMR067C YNL115CP53925 644 aa6.59□□□□□ -1.35
UBX4YMR067C RRN7P40992 514 aa6.58□□□□□ -1.36
UBX4YMR067C YMR196WQ04336 1088 aa6.58□□□□□ -1.36
UBX4YMR067C FPK1P53739 893 aa6.57□□□□□ -1.36
UBX4YMR067C ERF2Q06551 359 aa6.57□□□□□ -1.36
UBX4YMR067C RAS1P01119 309 aa6.56□□□□□ -1.36
UBX4YMR067C HST2P53686 357 aa6.55□□□□□ -1.36
UBX4YMR067C AGE1Q04412 482 aa6.55□□□□□ -1.36
UBX4YMR067C TUB4P53378 473 aa6.53□□□□□ -1.36
UBX4YMR067C SRC1Q03707 834 aa6.52□□□□□ -1.37
UBX4YMR067C RPN1P38764 993 aaKnown RBP6.51□□□□□ -1.37
UBX4YMR067C PAC1P39946 494 aaKnown RBP6.51□□□□□ -1.37
UBX4YMR067C LAM6Q08001 693 aa6.51□□□□□ -1.37
UBX4YMR067C SLY41P22215 453 aa6.5□□□□□ -1.37
UBX4YMR067C GLN1P32288 370 aaKnown RBP6.5□□□□□ -1.37
UBX4YMR067C CST6P40535 587 aa6.5□□□□□ -1.37
UBX4YMR067C MOD5P07884 428 aa6.48□□□□□ -1.37
UBX4YMR067C BDP1P46678 594 aa6.48□□□□□ -1.37
UBX4YMR067C MMP1Q12372 583 aa6.48□□□□□ -1.37
UBX4YMR067C TRK1P12685 1235 aa6.47□□□□□ -1.37
UBX4YMR067C TPD3P31383 635 aa6.47□□□□□ -1.37
UBX4YMR067C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
UBX4YMR067C KXD1P53158 218 aa6.47□□□□□ -1.37
UBX4YMR067C TBF1Q02457 562 aa6.47□□□□□ -1.37
UBX4YMR067C PUS6P53294 404 aa6.46□□□□□ -1.38
UBX4YMR067C FRK1Q03002 865 aaPredicted RBP6.46□□□□□ -1.38
UBX4YMR067C KIN1P13185 1064 aa6.44□□□□□ -1.38
UBX4YMR067C CSN12P47130 423 aa6.44□□□□□ -1.38
UBX4YMR067C HED1Q03937 162 aa6.44□□□□□ -1.38
UBX4YMR067C TRM1P15565 570 aaKnown RBP6.43□□□□□ -1.38
UBX4YMR067C SCJ1P25303 377 aa6.43□□□□□ -1.38
UBX4YMR067C RRD1P40454 393 aaKnown RBP6.43□□□□□ -1.38
UBX4YMR067C RPA14P50106 137 aa6.43□□□□□ -1.38
UBX4YMR067C ALR1Q08269 859 aa6.43□□□□□ -1.38
UBX4YMR067C SSA2P10592 639 aaKnown RBP6.42□□□□□ -1.38
UBX4YMR067C ESS1P22696 170 aa6.42□□□□□ -1.38
UBX4YMR067C HXT10P43581 546 aa6.42□□□□□ -1.38
UBX4YMR067C YDL206WQ12424 762 aa6.42□□□□□ -1.38
UBX4YMR067C PDC1P06169 563 aaKnown RBP6.41□□□□□ -1.38
UBX4YMR067C CDC4P07834 779 aa6.41□□□□□ -1.38
UBX4YMR067C YPR097WQ06839 1073 aa6.41□□□□□ -1.38
UBX4YMR067C KTR1P27810 393 aaKnown RBP6.4□□□□□ -1.38
UBX4YMR067C TYW1Q08960 810 aaKnown RBP6.4□□□□□ -1.38
UBX4YMR067C AIR1P40507 360 aaKnown RBP6.38□□□□□ -1.39
UBX4YMR067C CLA4P48562 842 aa6.38□□□□□ -1.39
UBX4YMR067C PKH3Q03306 898 aaPredicted RBP6.38□□□□□ -1.39
UBX4YMR067C YJU3P28321 313 aa6.37□□□□□ -1.39
UBX4YMR067C RSC30P38781 883 aa6.37□□□□□ -1.39
UBX4YMR067C SYH1Q02875 849 aaKnown RBP6.36□□□□□ -1.39
UBX4YMR067C ARG8P18544 423 aa6.34□□□□□ -1.39
UBX4YMR067C BRE2P43132 505 aa6.34□□□□□ -1.39
UBX4YMR067C PUS5Q06244 254 aa6.34□□□□□ -1.39
UBX4YMR067C GCR2Q01722 534 aa6.33□□□□□ -1.4
UBX4YMR067C RAD59Q12223 238 aa6.33□□□□□ -1.4
UBX4YMR067C AFT1P22149 690 aa6.31□□□□□ -1.4
UBX4YMR067C HPC2Q01448 625 aa6.31□□□□□ -1.4
UBX4YMR067C MET32Q12041 191 aa6.31□□□□□ -1.4
UBX4YMR067C KIP2P28743 706 aa6.3□□□□□ -1.4
UBX4YMR067C GUA1P38625 525 aaKnown RBP6.3□□□□□ -1.4
UBX4YMR067C VAC17P25591 423 aa6.29□□□□□ -1.4
UBX4YMR067C HST3P53687 447 aa6.29□□□□□ -1.4
UBX4YMR067C IXR1P33417 597 aa6.28□□□□□ -1.4
UBX4YMR067C RTT106P40161 455 aa6.28□□□□□ -1.4
UBX4YMR067C MRT4P33201 236 aaKnown RBP6.26□□□□□ -1.41
UBX4YMR067C ASH1P34233 588 aa6.26□□□□□ -1.41
UBX4YMR067C MSB3P48566 633 aaPredicted RBP6.26□□□□□ -1.41
UBX4YMR067C MAK16P10962 306 aaPredicted RBP6.25□□□□□ -1.41
UBX4YMR067C CSE4P36012 229 aa6.25□□□□□ -1.41
UBX4YMR067C LEO1P38439 464 aa6.25□□□□□ -1.41
UBX4YMR067C BRL1P38770 471 aa6.25□□□□□ -1.41
UBX4YMR067C NAF1P53919 492 aaKnown RBP6.25□□□□□ -1.41
UBX4YMR067C TEC1P18412 486 aa6.22□□□□□ -1.41
UBX4YMR067C SPT5P27692 1063 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms