RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C GLN1P32288 370 aaKnown RBP3.93□□□□□ -1.78
SGD1YLR336C ARH1P48360 493 aa3.93□□□□□ -1.78
SGD1YLR336C HAP5Q02516 242 aa3.93□□□□□ -1.78
SGD1YLR336C BRL1P38770 471 aa3.93□□□□□ -1.78
SGD1YLR336C MMP1Q12372 583 aa3.93□□□□□ -1.78
SGD1YLR336C YJU3P28321 313 aa3.92□□□□□ -1.78
SGD1YLR336C ERF2Q06551 359 aa3.92□□□□□ -1.78
SGD1YLR336C NUD1P32336 851 aa3.92□□□□□ -1.78
SGD1YLR336C HGH1P48362 394 aaKnown RBP3.92□□□□□ -1.78
SGD1YLR336C RLF2Q12495 606 aa3.91□□□□□ -1.78
SGD1YLR336C KEX2P13134 814 aa3.91□□□□□ -1.78
SGD1YLR336C PKH3Q03306 898 aaPredicted RBP3.91□□□□□ -1.78
SGD1YLR336C STR2P47164 639 aa3.9□□□□□ -1.78
SGD1YLR336C DPS1P04802 557 aaKnown RBP3.9□□□□□ -1.79
SGD1YLR336C RAM1P22007 431 aa3.9□□□□□ -1.79
SGD1YLR336C ISM1P48526 1002 aa3.9□□□□□ -1.79
SGD1YLR336C RAD59Q12223 238 aa3.9□□□□□ -1.79
SGD1YLR336C SLY41P22215 453 aa3.89□□□□□ -1.79
SGD1YLR336C YNL115CP53925 644 aa3.89□□□□□ -1.79
SGD1YLR336C YPR015CQ12531 247 aa3.89□□□□□ -1.79
SGD1YLR336C RSC30P38781 883 aa3.88□□□□□ -1.79
SGD1YLR336C YJL007CP47080 104 aa3.88□□□□□ -1.79
SGD1YLR336C BNI4P53858 892 aa3.88□□□□□ -1.79
SGD1YLR336C SEC2P17065 759 aa3.88□□□□□ -1.79
SGD1YLR336C BIM1P40013 344 aa3.88□□□□□ -1.79
SGD1YLR336C RTF1P53064 558 aa3.88□□□□□ -1.79
SGD1YLR336C TY1A-DR4O74302 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-HP0C2I4 478 aaKnown RBP3.87□□□□□ -1.79
SGD1YLR336C TY1A-AP0CX57 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-PR1P0CX58 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-ORP0CX59 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-PR2P0CX60 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-DR5P0CX65 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-ER2P0CX66 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-GR3P0CX67 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-LR1P0CX68 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-MR2P0CX69 440 aa3.87□□□□□ -1.79
SGD1YLR336C ARG8P18544 423 aa3.87□□□□□ -1.79
SGD1YLR336C ATG32P40458 529 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-JR2P47099 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-DR1Q03856 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-ML1Q04706 440 aaKnown RBP3.87□□□□□ -1.79
SGD1YLR336C TY1A-BRQ12217 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-NL2Q12470 440 aa3.87□□□□□ -1.79
SGD1YLR336C TY1A-GR2Q12485 440 aa3.87□□□□□ -1.79
SGD1YLR336C BUD20Q08004 166 aaPredicted RBP3.87□□□□□ -1.79
SGD1YLR336C NPL4P33755 580 aa3.86□□□□□ -1.79
SGD1YLR336C BIO2P32451 375 aa3.86□□□□□ -1.79
SGD1YLR336C SPT23P35210 1082 aa3.86□□□□□ -1.79
SGD1YLR336C YBL036CP38197 257 aa3.86□□□□□ -1.79
SGD1YLR336C TRM1P15565 570 aaKnown RBP3.86□□□□□ -1.79
SGD1YLR336C AGE1Q04412 482 aa3.86□□□□□ -1.79
SGD1YLR336C GCD11P32481 527 aaKnown RBP3.85□□□□□ -1.79
SGD1YLR336C PTC2P39966 464 aaKnown RBP3.85□□□□□ -1.79
SGD1YLR336C ERG12P07277 443 aa3.84□□□□□ -1.79
SGD1YLR336C TUB4P53378 473 aa3.84□□□□□ -1.79
SGD1YLR336C TIF1P10081 395 aaKnown RBP3.84□□□□□ -1.8
SGD1YLR336C PUS6P53294 404 aa3.84□□□□□ -1.8
SGD1YLR336C YML082WQ04533 649 aaKnown RBP3.84□□□□□ -1.8
SGD1YLR336C LAM6Q08001 693 aa3.84□□□□□ -1.8
SGD1YLR336C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
SGD1YLR336C CSE4P36012 229 aa3.83□□□□□ -1.8
SGD1YLR336C YNL108CP53929 270 aa3.83□□□□□ -1.8
SGD1YLR336C YDJ1P25491 409 aaKnown RBP3.82□□□□□ -1.8
SGD1YLR336C PRT1P06103 763 aaKnown RBP3.82□□□□□ -1.8
SGD1YLR336C PAC1P39946 494 aaKnown RBP3.82□□□□□ -1.8
SGD1YLR336C MAK16P10962 306 aaPredicted RBP3.81□□□□□ -1.8
SGD1YLR336C SUP45P12385 437 aaKnown RBP3.81□□□□□ -1.8
SGD1YLR336C YDL206WQ12424 762 aa3.81□□□□□ -1.8
SGD1YLR336C RRN7P40992 514 aa3.8□□□□□ -1.8
SGD1YLR336C TBF1Q02457 562 aa3.8□□□□□ -1.8
SGD1YLR336C RTG2P32608 588 aaKnown RBP3.79□□□□□ -1.8
SGD1YLR336C ENO2P00925 437 aaKnown RBP3.79□□□□□ -1.8
SGD1YLR336C RPL34BP40525 121 aaKnown RBP3.79□□□□□ -1.8
SGD1YLR336C YPR204WQ08995 1032 aa3.79□□□□□ -1.8
SGD1YLR336C RPA14P50106 137 aa3.78□□□□□ -1.8
SGD1YLR336C YPR097WQ06839 1073 aa3.78□□□□□ -1.8
SGD1YLR336C PDC1P06169 563 aaKnown RBP3.77□□□□□ -1.81
SGD1YLR336C ENO1P00924 437 aaKnown RBP3.77□□□□□ -1.81
SGD1YLR336C SPT5P27692 1063 aaKnown RBP3.77□□□□□ -1.81
SGD1YLR336C RIM21P48565 533 aa3.76□□□□□ -1.81
SGD1YLR336C MRX10Q05648 414 aa3.76□□□□□ -1.81
SGD1YLR336C GYP1Q08484 637 aa3.76□□□□□ -1.81
SGD1YLR336C CPS1P27614 576 aa3.76□□□□□ -1.81
SGD1YLR336C ISF1P32488 338 aa3.76□□□□□ -1.81
SGD1YLR336C SPT16P32558 1035 aaKnown RBP3.76□□□□□ -1.81
SGD1YLR336C TTI1P36097 1038 aa3.76□□□□□ -1.81
SGD1YLR336C NAF1P53919 492 aaKnown RBP3.76□□□□□ -1.81
SGD1YLR336C SRC1Q03707 834 aa3.76□□□□□ -1.81
SGD1YLR336C SUB2Q07478 446 aaKnown RBP3.76□□□□□ -1.81
SGD1YLR336C ALR1Q08269 859 aa3.76□□□□□ -1.81
SGD1YLR336C MOD5P07884 428 aa3.75□□□□□ -1.81
SGD1YLR336C SDH2P21801 266 aa3.75□□□□□ -1.81
SGD1YLR336C MCM16Q12262 181 aa3.75□□□□□ -1.81
SGD1YLR336C HXT10P43581 546 aa3.75□□□□□ -1.81
SGD1YLR336C PAT1P25644 796 aaKnown RBP3.74□□□□□ -1.81
SGD1YLR336C FIG4P42837 879 aa3.74□□□□□ -1.81
SGD1YLR336C SAS4Q04003 481 aa3.74□□□□□ -1.81
SGD1YLR336C RDS2P19541 446 aaKnown RBP3.74□□□□□ -1.81
SGD1YLR336C KXD1P53158 218 aa3.74□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms