RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C TY1A-LR1P0CX68 440 aa8.4□□□□□ -1.06
USB1YLR132C TY1A-MR2P0CX69 440 aa8.4□□□□□ -1.06
USB1YLR132C TY1A-JR2P47099 440 aa8.4□□□□□ -1.06
USB1YLR132C TY1A-DR1Q03856 440 aa8.4□□□□□ -1.06
USB1YLR132C TY1A-ML1Q04706 440 aaKnown RBP8.4□□□□□ -1.06
USB1YLR132C TY1A-BRQ12217 440 aa8.4□□□□□ -1.06
USB1YLR132C TY1A-NL2Q12470 440 aa8.4□□□□□ -1.06
USB1YLR132C TY1A-GR2Q12485 440 aa8.4□□□□□ -1.06
USB1YLR132C SEC2P17065 759 aa8.38□□□□□ -1.07
USB1YLR132C DIT2P21595 489 aa8.38□□□□□ -1.07
USB1YLR132C AMS1P22855 1083 aa8.37□□□□□ -1.07
USB1YLR132C GCD11P32481 527 aaKnown RBP8.37□□□□□ -1.07
USB1YLR132C SRC1Q03707 834 aa8.36□□□□□ -1.07
USB1YLR132C CLB5P30283 435 aa8.35□□□□□ -1.07
USB1YLR132C KEX2P13134 814 aa8.33□□□□□ -1.08
USB1YLR132C MRF1P30775 413 aaPredicted RBP8.33□□□□□ -1.08
USB1YLR132C ERF2Q06551 359 aa8.32□□□□□ -1.08
USB1YLR132C YEL077CQ3E7X8 1277 aa8.31□□□□□ -1.08
USB1YLR132C TEA1P47988 759 aa8.29□□□□□ -1.08
USB1YLR132C RRN7P40992 514 aa8.28□□□□□ -1.08
USB1YLR132C ERG12P07277 443 aa8.27□□□□□ -1.09
USB1YLR132C SPT16P32558 1035 aaKnown RBP8.27□□□□□ -1.09
USB1YLR132C CST6P40535 587 aa8.25□□□□□ -1.09
USB1YLR132C NIS1P53939 407 aa8.25□□□□□ -1.09
USB1YLR132C SIT4P20604 311 aa8.24□□□□□ -1.09
USB1YLR132C RTF1P53064 558 aa8.23□□□□□ -1.09
USB1YLR132C YNL115CP53925 644 aa8.22□□□□□ -1.09
USB1YLR132C PAT1P25644 796 aaKnown RBP8.21□□□□□ -1.1
USB1YLR132C AGE1Q04412 482 aa8.21□□□□□ -1.1
USB1YLR132C PAC1P39946 494 aaKnown RBP8.2□□□□□ -1.1
USB1YLR132C LAM6Q08001 693 aa8.2□□□□□ -1.1
USB1YLR132C TUB4P53378 473 aa8.19□□□□□ -1.1
USB1YLR132C YNR021WP53723 404 aaKnown RBP8.19□□□□□ -1.1
USB1YLR132C FPK1P53739 893 aa8.19□□□□□ -1.1
USB1YLR132C GLC3P32775 704 aa8.18□□□□□ -1.1
USB1YLR132C TRK1P12685 1235 aa8.17□□□□□ -1.1
USB1YLR132C BDP1P46678 594 aa8.16□□□□□ -1.1
USB1YLR132C ATF2P53296 535 aa8.16□□□□□ -1.1
USB1YLR132C FRK1Q03002 865 aaPredicted RBP8.16□□□□□ -1.1
USB1YLR132C CLA4P48562 842 aa8.15□□□□□ -1.1
USB1YLR132C YMR196WQ04336 1088 aa8.15□□□□□ -1.1
USB1YLR132C MOD5P07884 428 aa8.13□□□□□ -1.11
USB1YLR132C AIR1P40507 360 aaKnown RBP8.12□□□□□ -1.11
USB1YLR132C SLY41P22215 453 aa8.11□□□□□ -1.11
USB1YLR132C HST2P53686 357 aa8.11□□□□□ -1.11
USB1YLR132C SCJ1P25303 377 aa8.1□□□□□ -1.11
USB1YLR132C AIM7Q12156 149 aa8.07□□□□□ -1.12
USB1YLR132C MMP1Q12372 583 aa8.05□□□□□ -1.12
USB1YLR132C LEU3P08638 886 aa8.04□□□□□ -1.12
USB1YLR132C HED1Q03937 162 aa8.04□□□□□ -1.12
USB1YLR132C PDC1P06169 563 aaKnown RBP8.03□□□□□ -1.12
USB1YLR132C GLN1P32288 370 aaKnown RBP8.03□□□□□ -1.12
USB1YLR132C KXD1P53158 218 aa8.03□□□□□ -1.12
USB1YLR132C PUS5Q06244 254 aa8.03□□□□□ -1.12
USB1YLR132C CDC4P07834 779 aa8.02□□□□□ -1.13
USB1YLR132C TRM1P15565 570 aaKnown RBP8.02□□□□□ -1.13
USB1YLR132C ESS1P22696 170 aa8.02□□□□□ -1.13
USB1YLR132C TPD3P31383 635 aa8.02□□□□□ -1.13
USB1YLR132C LEO1P38439 464 aa8.02□□□□□ -1.13
USB1YLR132C PUS6P53294 404 aa8.02□□□□□ -1.13
USB1YLR132C TYW1Q08960 810 aaKnown RBP8.02□□□□□ -1.13
USB1YLR132C HXT10P43581 546 aa8.01□□□□□ -1.13
USB1YLR132C YDL206WQ12424 762 aa8.01□□□□□ -1.13
USB1YLR132C RRD1P40454 393 aaKnown RBP8□□□□□ -1.13
USB1YLR132C TBF1Q02457 562 aa8□□□□□ -1.13
USB1YLR132C KTR1P27810 393 aaKnown RBP7.99□□□□□ -1.13
USB1YLR132C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
USB1YLR132C YJU3P28321 313 aa7.98□□□□□ -1.13
USB1YLR132C RPA14P50106 137 aa7.98□□□□□ -1.13
USB1YLR132C BRE2P43132 505 aa7.97□□□□□ -1.13
USB1YLR132C YPR097WQ06839 1073 aa7.97□□□□□ -1.13
USB1YLR132C ALR1Q08269 859 aa7.97□□□□□ -1.13
USB1YLR132C MET32Q12041 191 aa7.96□□□□□ -1.14
USB1YLR132C RSC30P38781 883 aa7.93□□□□□ -1.14
USB1YLR132C CSN12P47130 423 aa7.93□□□□□ -1.14
USB1YLR132C PKH3Q03306 898 aaPredicted RBP7.93□□□□□ -1.14
USB1YLR132C KIN1P13185 1064 aa7.92□□□□□ -1.14
USB1YLR132C ASH1P34233 588 aa7.9□□□□□ -1.14
USB1YLR132C GCR2Q01722 534 aa7.9□□□□□ -1.14
USB1YLR132C SYH1Q02875 849 aaKnown RBP7.9□□□□□ -1.14
USB1YLR132C AFT1P22149 690 aa7.88□□□□□ -1.15
USB1YLR132C RPN1P38764 993 aaKnown RBP7.88□□□□□ -1.15
USB1YLR132C ARG8P18544 423 aa7.86□□□□□ -1.15
USB1YLR132C KIP2P28743 706 aa7.86□□□□□ -1.15
USB1YLR132C HST3P53687 447 aa7.86□□□□□ -1.15
USB1YLR132C RAD59Q12223 238 aa7.84□□□□□ -1.15
USB1YLR132C IXR1P33417 597 aa7.83□□□□□ -1.16
USB1YLR132C VAC17P25591 423 aa7.82□□□□□ -1.16
USB1YLR132C SSA2P10592 639 aaKnown RBP7.81□□□□□ -1.16
USB1YLR132C MRT4P33201 236 aaKnown RBP7.79□□□□□ -1.16
USB1YLR132C GUA1P38625 525 aaKnown RBP7.79□□□□□ -1.16
USB1YLR132C YJR115WP47152 169 aa7.79□□□□□ -1.16
USB1YLR132C MET22P32179 357 aa7.78□□□□□ -1.16
USB1YLR132C MSB3P48566 633 aaPredicted RBP7.78□□□□□ -1.16
USB1YLR132C GAR1P28007 205 aaKnown RBP7.76□□□□□ -1.17
USB1YLR132C ENV9Q08651 330 aa7.76□□□□□ -1.17
USB1YLR132C RGA1P39083 1007 aa7.75□□□□□ -1.17
USB1YLR132C FIG4P42837 879 aa7.75□□□□□ -1.17
USB1YLR132C ITT1Q04638 464 aa7.75□□□□□ -1.17
USB1YLR132C UGA3P26370 528 aa7.74□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms