RNA–Protein interactions for RNA: YKL220C

FRE2, Transcript of Ferric reductase and cupric reductase, yeastyeast

Gene FRE2, Length 2,136 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
FRE2YKL220C BRL1P38770 471 aa3.71□□□□□ -1.81
FRE2YKL220C YDL176WQ12027 708 aa3.71□□□□□ -1.81
FRE2YKL220C NUG1P40010 520 aaKnown RBP3.71□□□□□ -1.82
FRE2YKL220C SUB1P54000 292 aaKnown RBP3.71□□□□□ -1.82
FRE2YKL220C RPN1P38764 993 aaKnown RBP3.7□□□□□ -1.82
FRE2YKL220C ENV11P53246 860 aa3.7□□□□□ -1.82
FRE2YKL220C LAM6Q08001 693 aa3.7□□□□□ -1.82
FRE2YKL220C SAS10Q12136 610 aaPredicted RBP3.7□□□□□ -1.82
FRE2YKL220C HIF1Q12373 385 aa3.7□□□□□ -1.82
FRE2YKL220C ERG12P07277 443 aa3.69□□□□□ -1.82
FRE2YKL220C UBP14P38237 781 aaKnown RBP3.69□□□□□ -1.82
FRE2YKL220C VHR2P40041 505 aa3.69□□□□□ -1.82
FRE2YKL220C CDC4P07834 779 aa3.68□□□□□ -1.82
FRE2YKL220C RAD54P32863 898 aa3.68□□□□□ -1.82
FRE2YKL220C YPR148CQ06523 435 aa3.68□□□□□ -1.82
FRE2YKL220C CDC73Q06697 393 aa3.68□□□□□ -1.82
FRE2YKL220C ISW1P38144 1129 aa3.67□□□□□ -1.82
FRE2YKL220C CLA4P48562 842 aa3.67□□□□□ -1.82
FRE2YKL220C LCB5Q06147 687 aaKnown RBP3.67□□□□□ -1.82
FRE2YKL220C YLR326WQ06170 240 aaKnown RBP3.67□□□□□ -1.82
FRE2YKL220C SSA1P10591 642 aaKnown RBP3.67□□□□□ -1.82
FRE2YKL220C SSA2P10592 639 aaKnown RBP3.67□□□□□ -1.82
FRE2YKL220C KIC1P38692 1080 aa3.67□□□□□ -1.82
FRE2YKL220C NOP8Q08287 484 aaPredicted RBP3.67□□□□□ -1.82
FRE2YKL220C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
FRE2YKL220C PCS60P38137 543 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
FRE2YKL220C PDR1P12383 1068 aa3.65□□□□□ -1.83
FRE2YKL220C VPS72Q03388 795 aa3.65□□□□□ -1.83
FRE2YKL220C YML020WQ03722 664 aa3.65□□□□□ -1.83
FRE2YKL220C PEX21P50091 288 aa3.64□□□□□ -1.83
FRE2YKL220C NHA1Q99271 985 aa3.64□□□□□ -1.83
FRE2YKL220C ASF1P32447 279 aa3.64□□□□□ -1.83
FRE2YKL220C YDR090CQ03193 310 aa3.64□□□□□ -1.83
FRE2YKL220C BRN1P38170 754 aa3.63□□□□□ -1.83
FRE2YKL220C FAR11P53917 953 aa3.63□□□□□ -1.83
FRE2YKL220C SPT2P06843 333 aaPredicted RBP3.62□□□□□ -1.83
FRE2YKL220C RPS0AP32905 252 aaKnown RBP3.62□□□□□ -1.83
FRE2YKL220C CST6P40535 587 aa3.62□□□□□ -1.83
FRE2YKL220C OSW7P43611 510 aa3.62□□□□□ -1.83
FRE2YKL220C DAL5P15365 543 aa3.61□□□□□ -1.83
FRE2YKL220C REF2P42073 533 aaPredicted RBP3.61□□□□□ -1.83
FRE2YKL220C RTS3P53289 263 aa3.61□□□□□ -1.83
FRE2YKL220C BUD21Q08492 214 aaPredicted RBP3.61□□□□□ -1.83
FRE2YKL220C QCR6P00127 147 aa3.6□□□□□ -1.83
FRE2YKL220C PRT1P06103 763 aaKnown RBP3.6□□□□□ -1.83
FRE2YKL220C TAF13P11747 167 aa3.59□□□□□ -1.83
FRE2YKL220C TLG1Q03322 224 aa3.59□□□□□ -1.83
FRE2YKL220C CSC1Q06538 782 aa3.59□□□□□ -1.83
FRE2YKL220C YRR1Q12172 810 aa3.59□□□□□ -1.83
FRE2YKL220C TFB4Q12004 338 aa3.59□□□□□ -1.84
FRE2YKL220C TRK2P28584 889 aa3.58□□□□□ -1.84
FRE2YKL220C SPT16P32558 1035 aaKnown RBP3.58□□□□□ -1.84
FRE2YKL220C NPL4P33755 580 aa3.58□□□□□ -1.84
FRE2YKL220C SPC42P36094 363 aa3.58□□□□□ -1.84
FRE2YKL220C SSF1P38789 453 aaPredicted RBP3.58□□□□□ -1.84
FRE2YKL220C MPP10P47083 593 aaKnown RBP3.58□□□□□ -1.84
FRE2YKL220C YJR008WP47085 338 aa3.58□□□□□ -1.84
FRE2YKL220C ZDS1P50111 915 aaKnown RBP3.58□□□□□ -1.84
FRE2YKL220C GRX3Q03835 250 aa3.58□□□□□ -1.84
FRE2YKL220C GEF1P37020 779 aa3.58□□□□□ -1.84
FRE2YKL220C KIP3P53086 805 aaKnown RBP3.58□□□□□ -1.84
FRE2YKL220C NRD1P53617 575 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
FRE2YKL220C DOS2P54858 310 aa3.58□□□□□ -1.84
FRE2YKL220C GAP1P19145 602 aaPredicted RBP3.57□□□□□ -1.84
FRE2YKL220C TUM1Q08686 304 aaKnown RBP3.57□□□□□ -1.84
FRE2YKL220C RNA1P11745 407 aaKnown RBP3.56□□□□□ -1.84
FRE2YKL220C FPR3P38911 411 aaKnown RBP3.56□□□□□ -1.84
FRE2YKL220C VPS70P47161 811 aa3.56□□□□□ -1.84
FRE2YKL220C BRE1Q07457 700 aaKnown RBP3.56□□□□□ -1.84
FRE2YKL220C MAK21Q12176 1025 aaKnown RBP3.56□□□□□ -1.84
FRE2YKL220C YTA7P40340 1379 aa3.56□□□□□ -1.84
FRE2YKL220C HSP82P02829 709 aaKnown RBP3.56□□□□□ -1.84
FRE2YKL220C BUD20Q08004 166 aaPredicted RBP3.56□□□□□ -1.84
FRE2YKL220C SPT7P35177 1332 aa3.56□□□□□ -1.84
FRE2YKL220C NUD1P32336 851 aa3.55□□□□□ -1.84
FRE2YKL220C PLP2Q12017 286 aa3.55□□□□□ -1.84
FRE2YKL220C COX6P00427 148 aa3.54□□□□□ -1.84
FRE2YKL220C CKB1P43639 278 aa3.54□□□□□ -1.84
FRE2YKL220C STR2P47164 639 aa3.54□□□□□ -1.84
FRE2YKL220C FRK1Q03002 865 aaPredicted RBP3.54□□□□□ -1.84
FRE2YKL220C RAD2P07276 1031 aa3.53□□□□□ -1.84
FRE2YKL220C ORC6P38826 435 aa3.53□□□□□ -1.84
FRE2YKL220C NAB3P38996 802 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
FRE2YKL220C LSB3P43603 459 aaKnown RBP3.53□□□□□ -1.84
FRE2YKL220C ISM1P48526 1002 aa3.53□□□□□ -1.84
FRE2YKL220C YGR035CP53222 116 aa3.53□□□□□ -1.84
FRE2YKL220C GCD11P32481 527 aaKnown RBP3.53□□□□□ -1.84
FRE2YKL220C PAM1P37304 830 aaKnown RBP3.53□□□□□ -1.84
FRE2YKL220C ENP1P38333 483 aaKnown RBP3.53□□□□□ -1.84
FRE2YKL220C SLX8P40072 274 aa3.53□□□□□ -1.84
FRE2YKL220C RRD1P40454 393 aaKnown RBP3.53□□□□□ -1.84
FRE2YKL220C AIM21P40563 679 aa3.53□□□□□ -1.84
FRE2YKL220C TY4A-JP47023 414 aa3.53□□□□□ -1.84
FRE2YKL220C NOP7P53261 605 aaKnown RBP3.53□□□□□ -1.84
FRE2YKL220C HED1Q03937 162 aa3.53□□□□□ -1.84
FRE2YKL220C SEC20P28791 383 aa3.52□□□□□ -1.85
FRE2YKL220C RPT2P40327 437 aaKnown RBP3.52□□□□□ -1.85
FRE2YKL220C MRX12P47084 519 aa3.52□□□□□ -1.85
FRE2YKL220C YMR196WQ04336 1088 aa3.52□□□□□ -1.85
FRE2YKL220C PAT1P25644 796 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms