RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W TY1A-ML1Q04706 440 aaKnown RBP7.14□□□□□ -1.27
TFA1YKL028W TY1A-BRQ12217 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-NL2Q12470 440 aa7.14□□□□□ -1.27
TFA1YKL028W TY1A-GR2Q12485 440 aa7.14□□□□□ -1.27
TFA1YKL028W AIR1P40507 360 aaKnown RBP7.11□□□□□ -1.27
TFA1YKL028W NPL4P33755 580 aa7.1□□□□□ -1.27
TFA1YKL028W CLA4P48562 842 aa7.1□□□□□ -1.27
TFA1YKL028W SAS10Q12136 610 aaPredicted RBP7.1□□□□□ -1.27
TFA1YKL028W BRE2P43132 505 aa7.1□□□□□ -1.27
TFA1YKL028W LAM6Q08001 693 aa7.09□□□□□ -1.28
TFA1YKL028W SEC2P17065 759 aa7.08□□□□□ -1.28
TFA1YKL028W VPS70P47161 811 aa7.08□□□□□ -1.28
TFA1YKL028W GCD11P32481 527 aaKnown RBP7.07□□□□□ -1.28
TFA1YKL028W MAK21Q12176 1025 aaKnown RBP7.07□□□□□ -1.28
TFA1YKL028W SPT16P32558 1035 aaKnown RBP7.06□□□□□ -1.28
TFA1YKL028W COX6P00427 148 aa7.05□□□□□ -1.28
TFA1YKL028W MVP1P40959 511 aaKnown RBP7.05□□□□□ -1.28
TFA1YKL028W YPL062WQ02781 134 aa7.05□□□□□ -1.28
TFA1YKL028W FRK1Q03002 865 aaPredicted RBP7.03□□□□□ -1.28
TFA1YKL028W RRN7P40992 514 aa7.02□□□□□ -1.29
TFA1YKL028W YPR109WQ06104 294 aa7.01□□□□□ -1.29
TFA1YKL028W RGR1P19263 1082 aa7□□□□□ -1.29
TFA1YKL028W BDP1P46678 594 aa7□□□□□ -1.29
TFA1YKL028W DMA2P53924 522 aa6.99□□□□□ -1.29
TFA1YKL028W GCR2Q01722 534 aa6.99□□□□□ -1.29
TFA1YKL028W CDC4P07834 779 aa6.98□□□□□ -1.29
TFA1YKL028W KEX2P13134 814 aa6.96□□□□□ -1.3
TFA1YKL028W PAT1P25644 796 aaKnown RBP6.95□□□□□ -1.3
TFA1YKL028W GAR1P28007 205 aaKnown RBP6.95□□□□□ -1.3
TFA1YKL028W RPN1P38764 993 aaKnown RBP6.94□□□□□ -1.3
TFA1YKL028W ERF2Q06551 359 aa6.94□□□□□ -1.3
TFA1YKL028W HED1Q03937 162 aa6.92□□□□□ -1.3
TFA1YKL028W GBP2P25555 427 aaKnown RBP RIP-Chip data6.91□□□□□ -1.3 RIP-Chip
TFA1YKL028W PAC1P39946 494 aaKnown RBP6.9□□□□□ -1.31
TFA1YKL028W MET22P32179 357 aa6.87□□□□□ -1.31
TFA1YKL028W PSE1P32337 1089 aaKnown RBP6.87□□□□□ -1.31
TFA1YKL028W AGE1Q04412 482 aa6.87□□□□□ -1.31
TFA1YKL028W RLF2Q12495 606 aa6.87□□□□□ -1.31
TFA1YKL028W PBS2P08018 668 aa6.86□□□□□ -1.31
TFA1YKL028W ENV9Q08651 330 aa6.86□□□□□ -1.31
TFA1YKL028W MOD5P07884 428 aa6.85□□□□□ -1.31
TFA1YKL028W MET32Q12041 191 aa6.85□□□□□ -1.31
TFA1YKL028W CLB5P30283 435 aa6.84□□□□□ -1.31
TFA1YKL028W TUB4P53378 473 aa6.84□□□□□ -1.32
TFA1YKL028W CKB1P43639 278 aa6.83□□□□□ -1.32
TFA1YKL028W PUS5Q06244 254 aa6.82□□□□□ -1.32
TFA1YKL028W YDR444WQ04093 687 aa6.81□□□□□ -1.32
TFA1YKL028W AFT1P22149 690 aa6.8□□□□□ -1.32
TFA1YKL028W ASH1P34233 588 aa6.8□□□□□ -1.32
TFA1YKL028W RTF1P53064 558 aa6.8□□□□□ -1.32
TFA1YKL028W MAM3Q12296 706 aa6.8□□□□□ -1.32
TFA1YKL028W IES2P40154 320 aa6.78□□□□□ -1.32
TFA1YKL028W HST3P53687 447 aa6.77□□□□□ -1.33
TFA1YKL028W LCB5Q06147 687 aaKnown RBP6.77□□□□□ -1.33
TFA1YKL028W YNL115CP53925 644 aa6.76□□□□□ -1.33
TFA1YKL028W SIT4P20604 311 aa6.73□□□□□ -1.33
TFA1YKL028W YDL176WQ12027 708 aa6.73□□□□□ -1.33
TFA1YKL028W DSF2P38213 736 aa6.72□□□□□ -1.33
TFA1YKL028W RRD1P40454 393 aaKnown RBP6.72□□□□□ -1.33
TFA1YKL028W YJR115WP47152 169 aa6.71□□□□□ -1.34
TFA1YKL028W KXD1P53158 218 aa6.71□□□□□ -1.34
TFA1YKL028W TPD3P31383 635 aa6.7□□□□□ -1.34
TFA1YKL028W TEA1P47988 759 aa6.7□□□□□ -1.34
TFA1YKL028W NIS1P53939 407 aa6.7□□□□□ -1.34
TFA1YKL028W NUP42P49686 430 aaKnown RBP6.69□□□□□ -1.34
TFA1YKL028W AIM44Q99299 758 aa6.68□□□□□ -1.34
TFA1YKL028W PDC1P06169 563 aaKnown RBP6.67□□□□□ -1.34
TFA1YKL028W HXT10P43581 546 aa6.67□□□□□ -1.34
TFA1YKL028W MSB3P48566 633 aaPredicted RBP6.67□□□□□ -1.34
TFA1YKL028W SPB4P25808 606 aaPredicted RBP6.66□□□□□ -1.34
TFA1YKL028W SYH1Q02875 849 aaKnown RBP6.66□□□□□ -1.34
TFA1YKL028W SLY41P22215 453 aa6.62□□□□□ -1.35
TFA1YKL028W FPK1P53739 893 aa6.62□□□□□ -1.35
TFA1YKL028W YMR196WQ04336 1088 aa6.61□□□□□ -1.35
TFA1YKL028W YDL206WQ12424 762 aa6.6□□□□□ -1.35
TFA1YKL028W DIT2P21595 489 aa6.59□□□□□ -1.35
TFA1YKL028W UGA3P26370 528 aa6.59□□□□□ -1.35
TFA1YKL028W PTK2P47116 818 aaKnown RBP6.59□□□□□ -1.35
TFA1YKL028W TBF1Q02457 562 aa6.59□□□□□ -1.35
TFA1YKL028W RPA14P50106 137 aa6.59□□□□□ -1.36
TFA1YKL028W CAF120P53836 1060 aa6.59□□□□□ -1.36
TFA1YKL028W ALR1Q08269 859 aa6.59□□□□□ -1.36
TFA1YKL028W NAP1P25293 417 aaKnown RBP6.57□□□□□ -1.36
TFA1YKL028W KIP2P28743 706 aa6.57□□□□□ -1.36
TFA1YKL028W OPT2Q06593 877 aa6.56□□□□□ -1.36
TFA1YKL028W TRM1P15565 570 aaKnown RBP6.55□□□□□ -1.36
TFA1YKL028W ACO2P39533 789 aa6.55□□□□□ -1.36
TFA1YKL028W HGH1P48362 394 aaKnown RBP6.55□□□□□ -1.36
TFA1YKL028W PUS6P53294 404 aa6.55□□□□□ -1.36
TFA1YKL028W YPR097WQ06839 1073 aa6.55□□□□□ -1.36
TFA1YKL028W SRF1Q12516 437 aa6.55□□□□□ -1.36
TFA1YKL028W KIN1P13185 1064 aa6.54□□□□□ -1.36
TFA1YKL028W MRT4P33201 236 aaKnown RBP6.54□□□□□ -1.36
TFA1YKL028W IXR1P33417 597 aa6.54□□□□□ -1.36
TFA1YKL028W HST2P53686 357 aa6.52□□□□□ -1.37
TFA1YKL028W ORC1P54784 914 aaPredicted RBP6.52□□□□□ -1.37
TFA1YKL028W SCJ1P25303 377 aa6.51□□□□□ -1.37
TFA1YKL028W YML020WQ03722 664 aa6.51□□□□□ -1.37
TFA1YKL028W TYW1Q08960 810 aaKnown RBP6.51□□□□□ -1.37
TFA1YKL028W GLY1P37303 387 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms