RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C CLA4P48562 842 aa6.32□□□□□ -1.4
PDX1YGR193C RQC2Q12532 1038 aaKnown RBP6.32□□□□□ -1.4
PDX1YGR193C COX6P00427 148 aa6.31□□□□□ -1.4
PDX1YGR193C MVP1P40959 511 aaKnown RBP6.31□□□□□ -1.4
PDX1YGR193C AIR1P40507 360 aaKnown RBP6.3□□□□□ -1.4
PDX1YGR193C GCD11P32481 527 aaKnown RBP6.29□□□□□ -1.4
PDX1YGR193C ERG12P07277 443 aa6.28□□□□□ -1.4
PDX1YGR193C NPL4P33755 580 aa6.28□□□□□ -1.4
PDX1YGR193C YPR109WQ06104 294 aa6.28□□□□□ -1.4
PDX1YGR193C MAK21Q12176 1025 aaKnown RBP6.28□□□□□ -1.4
PDX1YGR193C RGR1P19263 1082 aa6.27□□□□□ -1.41
PDX1YGR193C LAM6Q08001 693 aa6.26□□□□□ -1.41
PDX1YGR193C SPT16P32558 1035 aaKnown RBP6.23□□□□□ -1.41
PDX1YGR193C RRN7P40992 514 aa6.23□□□□□ -1.41
PDX1YGR193C ERF2Q06551 359 aa6.23□□□□□ -1.41
PDX1YGR193C FRK1Q03002 865 aaPredicted RBP6.22□□□□□ -1.41
PDX1YGR193C BRE2P43132 505 aa6.21□□□□□ -1.42
PDX1YGR193C BDP1P46678 594 aa6.21□□□□□ -1.42
PDX1YGR193C KEX2P13134 814 aa6.2□□□□□ -1.42
PDX1YGR193C PBS2P08018 668 aa6.16□□□□□ -1.42
PDX1YGR193C YPL062WQ02781 134 aa6.16□□□□□ -1.42
PDX1YGR193C CDC4P07834 779 aa6.15□□□□□ -1.42
PDX1YGR193C PAC1P39946 494 aaKnown RBP6.15□□□□□ -1.42
PDX1YGR193C PAT1P25644 796 aaKnown RBP6.13□□□□□ -1.43
PDX1YGR193C PSE1P32337 1089 aaKnown RBP6.13□□□□□ -1.43
PDX1YGR193C AGE1Q04412 482 aa6.13□□□□□ -1.43
PDX1YGR193C GAR1P28007 205 aaKnown RBP6.11□□□□□ -1.43
PDX1YGR193C CKB1P43639 278 aa6.11□□□□□ -1.43
PDX1YGR193C GCR2Q01722 534 aa6.11□□□□□ -1.43
PDX1YGR193C MOD5P07884 428 aa6.1□□□□□ -1.43
PDX1YGR193C HED1Q03937 162 aa6.1□□□□□ -1.43
PDX1YGR193C TUB4P53378 473 aa6.08□□□□□ -1.44
PDX1YGR193C MET32Q12041 191 aa6.08□□□□□ -1.44
PDX1YGR193C IES2P40154 320 aa6.07□□□□□ -1.44
PDX1YGR193C MAM3Q12296 706 aa6.07□□□□□ -1.44
PDX1YGR193C MET22P32179 357 aa6.06□□□□□ -1.44
PDX1YGR193C PUS5Q06244 254 aa6.06□□□□□ -1.44
PDX1YGR193C CLB5P30283 435 aa6.05□□□□□ -1.44
PDX1YGR193C DSF2P38213 736 aa6.03□□□□□ -1.44
PDX1YGR193C NUP42P49686 430 aaKnown RBP6.03□□□□□ -1.44
PDX1YGR193C RTF1P53064 558 aa6.03□□□□□ -1.44
PDX1YGR193C YNL115CP53925 644 aa6.03□□□□□ -1.44
PDX1YGR193C SIT4P20604 311 aa6.02□□□□□ -1.45
PDX1YGR193C GBP2P25555 427 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
PDX1YGR193C ASH1P34233 588 aa6.02□□□□□ -1.45
PDX1YGR193C TAF7Q05021 590 aa6.02□□□□□ -1.45
PDX1YGR193C ENV9Q08651 330 aa6.02□□□□□ -1.45
PDX1YGR193C AFT1P22149 690 aa6□□□□□ -1.45
PDX1YGR193C NIS1P53939 407 aa6□□□□□ -1.45
PDX1YGR193C SAS10Q12136 610 aaPredicted RBP6□□□□□ -1.45
PDX1YGR193C TEA1P47988 759 aa5.99□□□□□ -1.45
PDX1YGR193C YDR444WQ04093 687 aa5.98□□□□□ -1.45
PDX1YGR193C DIT2P21595 489 aa5.97□□□□□ -1.45
PDX1YGR193C HST3P53687 447 aa5.96□□□□□ -1.46
PDX1YGR193C PDC1P06169 563 aaKnown RBP5.95□□□□□ -1.46
PDX1YGR193C TPD3P31383 635 aa5.95□□□□□ -1.46
PDX1YGR193C DMA1P38823 416 aa5.95□□□□□ -1.46
PDX1YGR193C RRD1P40454 393 aaKnown RBP5.95□□□□□ -1.46
PDX1YGR193C LCB5Q06147 687 aaKnown RBP5.95□□□□□ -1.46
PDX1YGR193C YDL176WQ12027 708 aa5.95□□□□□ -1.46
PDX1YGR193C HXT10P43581 546 aa5.94□□□□□ -1.46
PDX1YGR193C YJR115WP47152 169 aa5.94□□□□□ -1.46
PDX1YGR193C KXD1P53158 218 aa5.94□□□□□ -1.46
PDX1YGR193C FPK1P53739 893 aa5.93□□□□□ -1.46
PDX1YGR193C SLY41P22215 453 aa5.91□□□□□ -1.46
PDX1YGR193C SPB4P25808 606 aaPredicted RBP5.89□□□□□ -1.47
PDX1YGR193C SCJ1P25303 377 aa5.88□□□□□ -1.47
PDX1YGR193C MSB3P48566 633 aaPredicted RBP5.88□□□□□ -1.47
PDX1YGR193C SYH1Q02875 849 aaKnown RBP5.88□□□□□ -1.47
PDX1YGR193C YMR196WQ04336 1088 aa5.88□□□□□ -1.47
PDX1YGR193C YDL206WQ12424 762 aa5.88□□□□□ -1.47
PDX1YGR193C RPA14P50106 137 aa5.85□□□□□ -1.47
PDX1YGR193C TRM1P15565 570 aaKnown RBP5.84□□□□□ -1.47
PDX1YGR193C PUS6P53294 404 aa5.84□□□□□ -1.47
PDX1YGR193C TBF1Q02457 562 aa5.84□□□□□ -1.47
PDX1YGR193C HST2P53686 357 aa5.83□□□□□ -1.48
PDX1YGR193C YPR097WQ06839 1073 aa5.83□□□□□ -1.48
PDX1YGR193C ALR1Q08269 859 aa5.83□□□□□ -1.48
PDX1YGR193C KIP2P28743 706 aa5.82□□□□□ -1.48
PDX1YGR193C PTK2P47116 818 aaKnown RBP5.82□□□□□ -1.48
PDX1YGR193C UGA3P26370 528 aa5.81□□□□□ -1.48
PDX1YGR193C CAF120P53836 1060 aa5.81□□□□□ -1.48
PDX1YGR193C MRT4P33201 236 aaKnown RBP5.8□□□□□ -1.48
PDX1YGR193C IXR1P33417 597 aa5.8□□□□□ -1.48
PDX1YGR193C OPT2Q06593 877 aa5.8□□□□□ -1.48
PDX1YGR193C ESS1P22696 170 aa5.79□□□□□ -1.48
PDX1YGR193C MMP1Q12372 583 aa5.79□□□□□ -1.48
PDX1YGR193C ACO2P39533 789 aa5.78□□□□□ -1.48
PDX1YGR193C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PDX1YGR193C YJU3P28321 313 aa5.77□□□□□ -1.49
PDX1YGR193C SRF1Q12516 437 aa5.76□□□□□ -1.49
PDX1YGR193C GLN1P32288 370 aaKnown RBP5.75□□□□□ -1.49
PDX1YGR193C TYW1Q08960 810 aaKnown RBP5.75□□□□□ -1.49
PDX1YGR193C GLC3P32775 704 aa5.74□□□□□ -1.49
PDX1YGR193C ITT1Q04638 464 aa5.74□□□□□ -1.49
PDX1YGR193C VAC17P25591 423 aa5.73□□□□□ -1.49
PDX1YGR193C GLY1P37303 387 aaKnown RBP5.73□□□□□ -1.49
PDX1YGR193C NUP85P46673 744 aa5.73□□□□□ -1.49
PDX1YGR193C ATF2P53296 535 aa5.73□□□□□ -1.49
PDX1YGR193C RSC30P38781 883 aa5.72□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms