RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeastyeast

Gene VMA21, Length 234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA21YGR105W TY1A-AP0CX57 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-PR1P0CX58 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-ORP0CX59 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-PR2P0CX60 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-DR5P0CX65 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-ER2P0CX66 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-GR3P0CX67 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-LR1P0CX68 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-MR2P0CX69 440 aa6.9□□□□□ -1.3
VMA21YGR105W SEC2P17065 759 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-JR2P47099 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-DR1Q03856 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-ML1Q04706 440 aaKnown RBP6.9□□□□□ -1.3
VMA21YGR105W TY1A-BRQ12217 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-NL2Q12470 440 aa6.9□□□□□ -1.3
VMA21YGR105W TY1A-GR2Q12485 440 aa6.9□□□□□ -1.3
VMA21YGR105W AIM7Q12156 149 aa6.89□□□□□ -1.31
VMA21YGR105W RPN1P38764 993 aaKnown RBP6.88□□□□□ -1.31
VMA21YGR105W SIT4P20604 311 aa6.87□□□□□ -1.31
VMA21YGR105W FPK1P53739 893 aa6.87□□□□□ -1.31
VMA21YGR105W SAS4Q04003 481 aa6.87□□□□□ -1.31
VMA21YGR105W YMR196WQ04336 1088 aa6.85□□□□□ -1.31
VMA21YGR105W KIN1P13185 1064 aa6.84□□□□□ -1.31
VMA21YGR105W SDH2P21801 266 aa6.84□□□□□ -1.31
VMA21YGR105W YNL115CP53925 644 aa6.84□□□□□ -1.31
VMA21YGR105W SCJ1P25303 377 aa6.83□□□□□ -1.32
VMA21YGR105W RRN7P40992 514 aa6.82□□□□□ -1.32
VMA21YGR105W RTF1P53064 558 aa6.82□□□□□ -1.32
VMA21YGR105W TYW1Q08960 810 aaKnown RBP6.81□□□□□ -1.32
VMA21YGR105W SLY41P22215 453 aa6.8□□□□□ -1.32
VMA21YGR105W SPT16P32558 1035 aaKnown RBP6.8□□□□□ -1.32
VMA21YGR105W HST2P53686 357 aa6.8□□□□□ -1.32
VMA21YGR105W DPS1P04802 557 aaKnown RBP6.79□□□□□ -1.32
VMA21YGR105W TUB4P53378 473 aa6.79□□□□□ -1.32
VMA21YGR105W MMP1Q12372 583 aa6.79□□□□□ -1.32
VMA21YGR105W MRF1P30775 413 aaPredicted RBP6.78□□□□□ -1.32
VMA21YGR105W GLN1P32288 370 aaKnown RBP6.78□□□□□ -1.32
VMA21YGR105W AGE1Q04412 482 aa6.78□□□□□ -1.32
VMA21YGR105W RAS1P01119 309 aa6.77□□□□□ -1.33
VMA21YGR105W ESS1P22696 170 aa6.77□□□□□ -1.33
VMA21YGR105W PAT1P25644 796 aaKnown RBP6.77□□□□□ -1.33
VMA21YGR105W KTR1P27810 393 aaKnown RBP6.77□□□□□ -1.33
VMA21YGR105W PAC1P39946 494 aaKnown RBP6.77□□□□□ -1.33
VMA21YGR105W CSN12P47130 423 aa6.77□□□□□ -1.33
VMA21YGR105W ERG12P07277 443 aa6.75□□□□□ -1.33
VMA21YGR105W AMS1P22855 1083 aa6.75□□□□□ -1.33
VMA21YGR105W YJU3P28321 313 aa6.74□□□□□ -1.33
VMA21YGR105W YEL077CQ3E7X8 1277 aa6.73□□□□□ -1.33
VMA21YGR105W GUA1P38625 525 aaKnown RBP6.72□□□□□ -1.33
VMA21YGR105W LEO1P38439 464 aa6.71□□□□□ -1.34
VMA21YGR105W CST6P40535 587 aa6.71□□□□□ -1.34
VMA21YGR105W PUS6P53294 404 aa6.71□□□□□ -1.34
VMA21YGR105W PKH3Q03306 898 aaPredicted RBP6.71□□□□□ -1.34
VMA21YGR105W TRM1P15565 570 aaKnown RBP6.7□□□□□ -1.34
VMA21YGR105W FRK1Q03002 865 aaPredicted RBP6.7□□□□□ -1.34
VMA21YGR105W BDP1P46678 594 aa6.68□□□□□ -1.34
VMA21YGR105W TBF1Q02457 562 aa6.68□□□□□ -1.34
VMA21YGR105W MOD5P07884 428 aa6.67□□□□□ -1.34
VMA21YGR105W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
VMA21YGR105W LAM6Q08001 693 aa6.67□□□□□ -1.34
VMA21YGR105W YDL206WQ12424 762 aa6.67□□□□□ -1.34
VMA21YGR105W SSA2P10592 639 aaKnown RBP6.66□□□□□ -1.34
VMA21YGR105W ARG8P18544 423 aa6.66□□□□□ -1.34
VMA21YGR105W RSC30P38781 883 aa6.66□□□□□ -1.34
VMA21YGR105W KXD1P53158 218 aa6.66□□□□□ -1.34
VMA21YGR105W PDC1P06169 563 aaKnown RBP6.65□□□□□ -1.34
VMA21YGR105W RPA14P50106 137 aa6.64□□□□□ -1.35
VMA21YGR105W RAD59Q12223 238 aa6.64□□□□□ -1.35
VMA21YGR105W HXT10P43581 546 aa6.63□□□□□ -1.35
VMA21YGR105W CLA4P48562 842 aa6.63□□□□□ -1.35
VMA21YGR105W PUS5Q06244 254 aa6.63□□□□□ -1.35
VMA21YGR105W SRC1Q03707 834 aa6.62□□□□□ -1.35
VMA21YGR105W YPR097WQ06839 1073 aa6.62□□□□□ -1.35
VMA21YGR105W ALR1Q08269 859 aa6.62□□□□□ -1.35
VMA21YGR105W HPC2Q01448 625 aa6.61□□□□□ -1.35
VMA21YGR105W RRD1P40454 393 aaKnown RBP6.6□□□□□ -1.35
VMA21YGR105W TPD3P31383 635 aa6.59□□□□□ -1.35
VMA21YGR105W AIR1P40507 360 aaKnown RBP6.59□□□□□ -1.35
VMA21YGR105W TFB3Q03290 321 aa6.59□□□□□ -1.35
VMA21YGR105W PKC1P24583 1151 aa6.56□□□□□ -1.36
VMA21YGR105W BRL1P38770 471 aa6.56□□□□□ -1.36
VMA21YGR105W HED1Q03937 162 aa6.55□□□□□ -1.36
VMA21YGR105W TRK1P12685 1235 aa6.53□□□□□ -1.36
VMA21YGR105W KIP2P28743 706 aa6.52□□□□□ -1.37
VMA21YGR105W SYH1Q02875 849 aaKnown RBP6.52□□□□□ -1.37
VMA21YGR105W CDC4P07834 779 aa6.51□□□□□ -1.37
VMA21YGR105W MAK16P10962 306 aaPredicted RBP6.51□□□□□ -1.37
VMA21YGR105W YBL036CP38197 257 aa6.51□□□□□ -1.37
VMA21YGR105W VAC17P25591 423 aa6.5□□□□□ -1.37
VMA21YGR105W IXR1P33417 597 aa6.5□□□□□ -1.37
VMA21YGR105W ITT1Q04638 464 aa6.5□□□□□ -1.37
VMA21YGR105W MET32Q12041 191 aa6.5□□□□□ -1.37
VMA21YGR105W FIG4P42837 879 aa6.49□□□□□ -1.37
VMA21YGR105W CSE4P36012 229 aa6.48□□□□□ -1.37
VMA21YGR105W DMA2P53924 522 aa6.48□□□□□ -1.37
VMA21YGR105W TEC1P18412 486 aa6.45□□□□□ -1.38
VMA21YGR105W BIO2P32451 375 aa6.45□□□□□ -1.38
VMA21YGR105W ASH1P34233 588 aa6.45□□□□□ -1.38
VMA21YGR105W YDJ1P25491 409 aaKnown RBP6.44□□□□□ -1.38
VMA21YGR105W YJL007CP47080 104 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms