RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C TY1A-ORP0CX59 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-PR2P0CX60 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-DR5P0CX65 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-ER2P0CX66 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-GR3P0CX67 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-LR1P0CX68 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-MR2P0CX69 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-JR2P47099 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-DR1Q03856 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-ML1Q04706 440 aaKnown RBP6.7□□□□□ -1.34
SNU56YDR240C LAM6Q08001 693 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-BRQ12217 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-NL2Q12470 440 aa6.7□□□□□ -1.34
SNU56YDR240C TY1A-GR2Q12485 440 aa6.7□□□□□ -1.34
SNU56YDR240C CLA4P48562 842 aa6.69□□□□□ -1.34
SNU56YDR240C PBS2P08018 668 aa6.68□□□□□ -1.34
SNU56YDR240C SEC2P17065 759 aa6.68□□□□□ -1.34
SNU56YDR240C MVP1P40959 511 aaKnown RBP6.67□□□□□ -1.34
SNU56YDR240C DSF2P38213 736 aa6.65□□□□□ -1.35
SNU56YDR240C FRK1Q03002 865 aaPredicted RBP6.65□□□□□ -1.35
SNU56YDR240C CDC4P07834 779 aa6.64□□□□□ -1.35
SNU56YDR240C PAT1P25644 796 aaKnown RBP6.64□□□□□ -1.35
SNU56YDR240C GAR1P28007 205 aaKnown RBP6.64□□□□□ -1.35
SNU56YDR240C GBP2P25555 427 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
SNU56YDR240C RRN7P40992 514 aa6.63□□□□□ -1.35
SNU56YDR240C RGR1P19263 1082 aa6.62□□□□□ -1.35
SNU56YDR240C BDP1P46678 594 aa6.62□□□□□ -1.35
SNU56YDR240C YPR109WQ06104 294 aa6.62□□□□□ -1.35
SNU56YDR240C MAM3Q12296 706 aa6.62□□□□□ -1.35
SNU56YDR240C HED1Q03937 162 aa6.6□□□□□ -1.35
SNU56YDR240C SPB4P25808 606 aaPredicted RBP6.58□□□□□ -1.36
SNU56YDR240C PSE1P32337 1089 aaKnown RBP6.57□□□□□ -1.36
SNU56YDR240C MET22P32179 357 aa6.55□□□□□ -1.36
SNU56YDR240C IES2P40154 320 aa6.55□□□□□ -1.36
SNU56YDR240C ENV9Q08651 330 aa6.55□□□□□ -1.36
SNU56YDR240C KEX2P13134 814 aa6.53□□□□□ -1.36
SNU56YDR240C CLB5P30283 435 aa6.52□□□□□ -1.37
SNU56YDR240C NUP42P49686 430 aaKnown RBP6.52□□□□□ -1.37
SNU56YDR240C ERF2Q06551 359 aa6.52□□□□□ -1.37
SNU56YDR240C MOD5P07884 428 aa6.49□□□□□ -1.37
SNU56YDR240C PAC1P39946 494 aaKnown RBP6.49□□□□□ -1.37
SNU56YDR240C YDR444WQ04093 687 aa6.49□□□□□ -1.37
SNU56YDR240C ASH1P34233 588 aa6.47□□□□□ -1.37
SNU56YDR240C MET32Q12041 191 aa6.47□□□□□ -1.37
SNU56YDR240C AFT1P22149 690 aa6.47□□□□□ -1.37
SNU56YDR240C HST3P53687 447 aa6.46□□□□□ -1.38
SNU56YDR240C AGE1Q04412 482 aa6.46□□□□□ -1.38
SNU56YDR240C RTF1P53064 558 aa6.45□□□□□ -1.38
SNU56YDR240C TUB4P53378 473 aa6.45□□□□□ -1.38
SNU56YDR240C LCB5Q06147 687 aaKnown RBP6.45□□□□□ -1.38
SNU56YDR240C DIT2P21595 489 aa6.44□□□□□ -1.38
SNU56YDR240C YNR021WP53723 404 aaKnown RBP6.43□□□□□ -1.38
SNU56YDR240C PUS5Q06244 254 aa6.42□□□□□ -1.38
SNU56YDR240C TEA1P47988 759 aa6.41□□□□□ -1.38
SNU56YDR240C LEU3P08638 886 aa6.4□□□□□ -1.39
SNU56YDR240C YNL115CP53925 644 aa6.4□□□□□ -1.39
SNU56YDR240C YDL176WQ12027 708 aa6.4□□□□□ -1.39
SNU56YDR240C RRD1P40454 393 aaKnown RBP6.38□□□□□ -1.39
SNU56YDR240C YJR115WP47152 169 aa6.37□□□□□ -1.39
SNU56YDR240C SIT4P20604 311 aa6.36□□□□□ -1.39
SNU56YDR240C TPD3P31383 635 aa6.36□□□□□ -1.39
SNU56YDR240C KXD1P53158 218 aa6.36□□□□□ -1.39
SNU56YDR240C ATF2P53296 535 aa6.36□□□□□ -1.39
SNU56YDR240C AIM7Q12156 149 aa6.35□□□□□ -1.39
SNU56YDR240C MSB3P48566 633 aaPredicted RBP6.34□□□□□ -1.4
SNU56YDR240C NIS1P53939 407 aa6.34□□□□□ -1.4
SNU56YDR240C GLC3P32775 704 aa6.33□□□□□ -1.4
SNU56YDR240C HXT10P43581 546 aa6.32□□□□□ -1.4
SNU56YDR240C SYH1Q02875 849 aaKnown RBP6.32□□□□□ -1.4
SNU56YDR240C YMR196WQ04336 1088 aa6.31□□□□□ -1.4
SNU56YDR240C FPK1P53739 893 aa6.3□□□□□ -1.4
SNU56YDR240C PDC1P06169 563 aaKnown RBP6.28□□□□□ -1.4
SNU56YDR240C HST2P53686 357 aa6.28□□□□□ -1.4
SNU56YDR240C UGA3P26370 528 aa6.27□□□□□ -1.41
SNU56YDR240C RPN1P38764 993 aaKnown RBP6.26□□□□□ -1.41
SNU56YDR240C ACO2P39533 789 aa6.26□□□□□ -1.41
SNU56YDR240C SLY41P22215 453 aa6.25□□□□□ -1.41
SNU56YDR240C PTK2P47116 818 aaKnown RBP6.25□□□□□ -1.41
SNU56YDR240C CAF120P53836 1060 aa6.25□□□□□ -1.41
SNU56YDR240C YLR346CQ06139 101 aa6.24□□□□□ -1.41
SNU56YDR240C ALR1Q08269 859 aa6.24□□□□□ -1.41
SNU56YDR240C GLN1P32288 370 aaKnown RBP6.23□□□□□ -1.41
SNU56YDR240C RPA14P50106 137 aa6.23□□□□□ -1.41
SNU56YDR240C OPT2Q06593 877 aa6.23□□□□□ -1.41
SNU56YDR240C SRF1Q12516 437 aa6.23□□□□□ -1.41
SNU56YDR240C KIP2P28743 706 aa6.22□□□□□ -1.41
SNU56YDR240C MMP1Q12372 583 aa6.22□□□□□ -1.41
SNU56YDR240C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
SNU56YDR240C YPR097WQ06839 1073 aa6.22□□□□□ -1.41
SNU56YDR240C RTT106P40161 455 aa6.21□□□□□ -1.42
SNU56YDR240C PUS6P53294 404 aa6.21□□□□□ -1.42
SNU56YDR240C TBF1Q02457 562 aa6.21□□□□□ -1.42
SNU56YDR240C YDL206WQ12424 762 aa6.21□□□□□ -1.42
SNU56YDR240C KIN1P13185 1064 aa6.2□□□□□ -1.42
SNU56YDR240C MRT4P33201 236 aaKnown RBP6.2□□□□□ -1.42
SNU56YDR240C IXR1P33417 597 aa6.19□□□□□ -1.42
SNU56YDR240C GLY1P37303 387 aaKnown RBP6.19□□□□□ -1.42
SNU56YDR240C NUP85P46673 744 aa6.19□□□□□ -1.42
SNU56YDR240C SCJ1P25303 377 aa6.18□□□□□ -1.42
SNU56YDR240C CSN12P47130 423 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms