RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C PRT1P06103 763 aaKnown RBP8.06□□□□□ -1.12
SPR28YDR218C CKB1P43639 278 aa8.06□□□□□ -1.12
SPR28YDR218C SAS10Q12136 610 aaPredicted RBP8.06□□□□□ -1.12
SPR28YDR218C SEC2P17065 759 aa8.03□□□□□ -1.12
SPR28YDR218C YPR109WQ06104 294 aa8.03□□□□□ -1.12
SPR28YDR218C NPL4P33755 580 aa7.97□□□□□ -1.13
SPR28YDR218C DSF2P38213 736 aa7.97□□□□□ -1.13
SPR28YDR218C YEL077CQ3E7X8 1277 aa7.97□□□□□ -1.13
SPR28YDR218C GCD11P32481 527 aaKnown RBP7.96□□□□□ -1.14
SPR28YDR218C ERF2Q06551 359 aa7.96□□□□□ -1.14
SPR28YDR218C MAM3Q12296 706 aa7.96□□□□□ -1.14
SPR28YDR218C MRF1P30775 413 aaPredicted RBP7.95□□□□□ -1.14
SPR28YDR218C PSE1P32337 1089 aaKnown RBP7.95□□□□□ -1.14
SPR28YDR218C IES2P40154 320 aa7.95□□□□□ -1.14
SPR28YDR218C CST6P40535 587 aa7.95□□□□□ -1.14
SPR28YDR218C TRK1P12685 1235 aa7.93□□□□□ -1.14
SPR28YDR218C KEX2P13134 814 aa7.93□□□□□ -1.14
SPR28YDR218C NUP42P49686 430 aaKnown RBP7.91□□□□□ -1.14
SPR28YDR218C ERG12P07277 443 aa7.9□□□□□ -1.14
SPR28YDR218C RRN7P40992 514 aa7.9□□□□□ -1.14
SPR28YDR218C CLA4P48562 842 aa7.9□□□□□ -1.14
SPR28YDR218C LAM6Q08001 693 aa7.89□□□□□ -1.15
SPR28YDR218C SPT16P32558 1035 aaKnown RBP7.88□□□□□ -1.15
SPR28YDR218C AIR1P40507 360 aaKnown RBP7.87□□□□□ -1.15
SPR28YDR218C DIT2P21595 489 aa7.84□□□□□ -1.15
SPR28YDR218C CLB5P30283 435 aa7.84□□□□□ -1.15
SPR28YDR218C PAC1P39946 494 aaKnown RBP7.84□□□□□ -1.15
SPR28YDR218C AGE1Q04412 482 aa7.84□□□□□ -1.15
SPR28YDR218C BDP1P46678 594 aa7.83□□□□□ -1.16
SPR28YDR218C FRK1Q03002 865 aaPredicted RBP7.83□□□□□ -1.16
SPR28YDR218C SPB4P25808 606 aaPredicted RBP7.81□□□□□ -1.16
SPR28YDR218C TUB4P53378 473 aa7.79□□□□□ -1.16
SPR28YDR218C NIS1P53939 407 aa7.79□□□□□ -1.16
SPR28YDR218C SIT4P20604 311 aa7.78□□□□□ -1.16
SPR28YDR218C MOD5P07884 428 aa7.77□□□□□ -1.17
SPR28YDR218C PAT1P25644 796 aaKnown RBP7.77□□□□□ -1.17
SPR28YDR218C LEO1P38439 464 aa7.77□□□□□ -1.17
SPR28YDR218C TEA1P47988 759 aa7.77□□□□□ -1.17
SPR28YDR218C RTF1P53064 558 aa7.77□□□□□ -1.17
SPR28YDR218C YNL115CP53925 644 aa7.75□□□□□ -1.17
SPR28YDR218C CDC4P07834 779 aa7.71□□□□□ -1.18
SPR28YDR218C BRE2P43132 505 aa7.71□□□□□ -1.18
SPR28YDR218C FPK1P53739 893 aa7.7□□□□□ -1.18
SPR28YDR218C HED1Q03937 162 aa7.69□□□□□ -1.18
SPR28YDR218C PUS5Q06244 254 aa7.69□□□□□ -1.18
SPR28YDR218C RGA1P39083 1007 aa7.68□□□□□ -1.18
SPR28YDR218C RGA2Q06407 1009 aa7.66□□□□□ -1.18
SPR28YDR218C MET32Q12041 191 aa7.66□□□□□ -1.18
SPR28YDR218C SLY41P22215 453 aa7.64□□□□□ -1.19
SPR28YDR218C SCJ1P25303 377 aa7.64□□□□□ -1.19
SPR28YDR218C PDC1P06169 563 aaKnown RBP7.63□□□□□ -1.19
SPR28YDR218C YMR196WQ04336 1088 aa7.63□□□□□ -1.19
SPR28YDR218C TPD3P31383 635 aa7.61□□□□□ -1.19
SPR28YDR218C GLC3P32775 704 aa7.61□□□□□ -1.19
SPR28YDR218C RRD1P40454 393 aaKnown RBP7.61□□□□□ -1.19
SPR28YDR218C HST2P53686 357 aa7.6□□□□□ -1.19
SPR28YDR218C HXT10P43581 546 aa7.59□□□□□ -1.19
SPR28YDR218C KXD1P53158 218 aa7.59□□□□□ -1.19
SPR28YDR218C GCR2Q01722 534 aa7.59□□□□□ -1.19
SPR28YDR218C YNR021WP53723 404 aaKnown RBP7.58□□□□□ -1.2
SPR28YDR218C ASH1P34233 588 aa7.57□□□□□ -1.2
SPR28YDR218C YDL206WQ12424 762 aa7.57□□□□□ -1.2
SPR28YDR218C TRM1P15565 570 aaKnown RBP7.56□□□□□ -1.2
SPR28YDR218C ATF2P53296 535 aa7.56□□□□□ -1.2
SPR28YDR218C AFT1P22149 690 aa7.55□□□□□ -1.2
SPR28YDR218C ESS1P22696 170 aa7.54□□□□□ -1.2
SPR28YDR218C RPA14P50106 137 aa7.54□□□□□ -1.2
SPR28YDR218C PUS6P53294 404 aa7.54□□□□□ -1.2
SPR28YDR218C MMP1Q12372 583 aa7.54□□□□□ -1.2
SPR28YDR218C MET22P32179 357 aa7.53□□□□□ -1.2
SPR28YDR218C YPL062WQ02781 134 aa7.53□□□□□ -1.2
SPR28YDR218C YPR097WQ06839 1073 aa7.53□□□□□ -1.2
SPR28YDR218C KTR1P27810 393 aaKnown RBP7.52□□□□□ -1.21
SPR28YDR218C GAR1P28007 205 aaKnown RBP7.52□□□□□ -1.21
SPR28YDR218C TBF1Q02457 562 aa7.52□□□□□ -1.21
SPR28YDR218C TYW1Q08960 810 aaKnown RBP7.52□□□□□ -1.21
SPR28YDR218C YJU3P28321 313 aa7.51□□□□□ -1.21
SPR28YDR218C GLN1P32288 370 aaKnown RBP7.51□□□□□ -1.21
SPR28YDR218C ALR1Q08269 859 aa7.51□□□□□ -1.21
SPR28YDR218C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.5□□□□□ -1.21not detected
SPR28YDR218C HST3P53687 447 aa7.5□□□□□ -1.21
SPR28YDR218C SYH1Q02875 849 aaKnown RBP7.49□□□□□ -1.21
SPR28YDR218C ENV9Q08651 330 aa7.49□□□□□ -1.21
SPR28YDR218C YJR115WP47152 169 aa7.48□□□□□ -1.21
SPR28YDR218C AIM7Q12156 149 aa7.47□□□□□ -1.21
SPR28YDR218C RSC30P38781 883 aa7.46□□□□□ -1.22
SPR28YDR218C YDR444WQ04093 687 aa7.45□□□□□ -1.22
SPR28YDR218C KIP2P28743 706 aa7.43□□□□□ -1.22
SPR28YDR218C MSB3P48566 633 aaPredicted RBP7.43□□□□□ -1.22
SPR28YDR218C LCB5Q06147 687 aaKnown RBP7.43□□□□□ -1.22
SPR28YDR218C IXR1P33417 597 aa7.42□□□□□ -1.22
SPR28YDR218C MRT4P33201 236 aaKnown RBP7.41□□□□□ -1.22
SPR28YDR218C PKH3Q03306 898 aaPredicted RBP7.41□□□□□ -1.22
SPR28YDR218C YDL176WQ12027 708 aa7.41□□□□□ -1.22
SPR28YDR218C GBP2P25555 427 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
SPR28YDR218C VAC17P25591 423 aa7.39□□□□□ -1.23
SPR28YDR218C ITT1Q04638 464 aa7.39□□□□□ -1.23
SPR28YDR218C PTK2P47116 818 aaKnown RBP7.37□□□□□ -1.23
SPR28YDR218C CSN12P47130 423 aa7.37□□□□□ -1.23
SPR28YDR218C ARG8P18544 423 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms