RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	AMS1	P22855	1083 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	CLB5	P30283	435 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	NPL4	P33755	580 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-JR2	P47099	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-DR1	Q03856	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-ML1	Q04706	440 aa	Known RBP	9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-BR	Q12217	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-NL2	Q12470	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	TY1A-GR2	Q12485	440 aa		9.3	□□□□□ -0.92
RPC53	YDL150W	RAS1	P01119	309 aa		9.28	□□□□□ -0.92
RPC53	YDL150W	SRC1	Q03707	834 aa		9.28	□□□□□ -0.92
RPC53	YDL150W	SEC2	P17065	759 aa		9.27	□□□□□ -0.93
RPC53	YDL150W	MRF1	P30775	413 aa	Predicted RBP	9.27	□□□□□ -0.93
RPC53	YDL150W	DIT2	P21595	489 aa		9.24	□□□□□ -0.93
RPC53	YDL150W	GCD11	P32481	527 aa	Known RBP	9.23	□□□□□ -0.93
RPC53	YDL150W	YEL077C	Q3E7X8	1277 aa		9.23	□□□□□ -0.93
RPC53	YDL150W	KEX2	P13134	814 aa		9.18	□□□□□ -0.94
RPC53	YDL150W	SIT4	P20604	311 aa		9.18	□□□□□ -0.94
RPC53	YDL150W	RTF1	P53064	558 aa		9.18	□□□□□ -0.94
RPC53	YDL150W	ERF2	Q06551	359 aa		9.18	□□□□□ -0.94
RPC53	YDL150W	TEA1	P47988	759 aa		9.17	□□□□□ -0.94
RPC53	YDL150W	ERG12	P07277	443 aa		9.16	□□□□□ -0.94
RPC53	YDL150W	SPT16	P32558	1035 aa	Known RBP	9.15	□□□□□ -0.94
RPC53	YDL150W	RRN7	P40992	514 aa		9.13	□□□□□ -0.95
RPC53	YDL150W	PAT1	P25644	796 aa	Known RBP	9.11	□□□□□ -0.95
RPC53	YDL150W	CST6	P40535	587 aa		9.11	□□□□□ -0.95
RPC53	YDL150W	YNR021W	P53723	404 aa	Known RBP	9.11	□□□□□ -0.95
RPC53	YDL150W	YNL115C	P53925	644 aa		9.11	□□□□□ -0.95
RPC53	YDL150W	NIS1	P53939	407 aa		9.11	□□□□□ -0.95
RPC53	YDL150W	AGE1	Q04412	482 aa		9.11	□□□□□ -0.95
RPC53	YDL150W	LAM6	Q08001	693 aa		9.1	□□□□□ -0.95
RPC53	YDL150W	TRK1	P12685	1235 aa		9.07	□□□□□ -0.96
RPC53	YDL150W	PAC1	P39946	494 aa	Known RBP	9.06	□□□□□ -0.96
RPC53	YDL150W	TUB4	P53378	473 aa		9.06	□□□□□ -0.96
RPC53	YDL150W	MOD5	P07884	428 aa		9.05	□□□□□ -0.96
RPC53	YDL150W	FPK1	P53739	893 aa		9.05	□□□□□ -0.96
RPC53	YDL150W	BDP1	P46678	594 aa		9.02	□□□□□ -0.97
RPC53	YDL150W	ATF2	P53296	535 aa		9	□□□□□ -0.97
RPC53	YDL150W	HST2	P53686	357 aa		9	□□□□□ -0.97
RPC53	YDL150W	GLC3	P32775	704 aa		8.99	□□□□□ -0.97
RPC53	YDL150W	FRK1	Q03002	865 aa	Predicted RBP	8.99	□□□□□ -0.97
RPC53	YDL150W	AIM7	Q12156	149 aa		8.99	□□□□□ -0.97
RPC53	YDL150W	CLA4	P48562	842 aa		8.98	□□□□□ -0.97
RPC53	YDL150W	YMR196W	Q04336	1088 aa		8.98	□□□□□ -0.97
RPC53	YDL150W	TPD3	P31383	635 aa		8.97	□□□□□ -0.97
RPC53	YDL150W	HED1	Q03937	162 aa		8.96	□□□□□ -0.98
RPC53	YDL150W	SLY41	P22215	453 aa		8.95	□□□□□ -0.98
RPC53	YDL150W	AIR1	P40507	360 aa	Known RBP	8.95	□□□□□ -0.98
RPC53	YDL150W	CDC4	P07834	779 aa		8.94	□□□□□ -0.98
RPC53	YDL150W	LEU3	P08638	886 aa		8.94	□□□□□ -0.98
RPC53	YDL150W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	8.92	□□□□□ -0.98	not detected
RPC53	YDL150W	KXD1	P53158	218 aa		8.91	□□□□□ -0.98
RPC53	YDL150W	PUS6	P53294	404 aa		8.91	□□□□□ -0.98
RPC53	YDL150W	SCJ1	P25303	377 aa		8.9	□□□□□ -0.98
RPC53	YDL150W	GLN1	P32288	370 aa	Known RBP	8.9	□□□□□ -0.98
RPC53	YDL150W	MMP1	Q12372	583 aa		8.9	□□□□□ -0.98
RPC53	YDL150W	PDC1	P06169	563 aa	Known RBP	8.89	□□□□□ -0.99
RPC53	YDL150W	HXT10	P43581	546 aa		8.89	□□□□□ -0.99
RPC53	YDL150W	INO80	P53115	1489 aa		8.89	□□□□□ -0.99
RPC53	YDL150W	RRD1	P40454	393 aa	Known RBP	8.88	□□□□□ -0.99
RPC53	YDL150W	RPA14	P50106	137 aa		8.88	□□□□□ -0.99
RPC53	YDL150W	TRM1	P15565	570 aa	Known RBP	8.86	□□□□□ -0.99
RPC53	YDL150W	YPR097W	Q06839	1073 aa		8.86	□□□□□ -0.99
RPC53	YDL150W	MON2	P48563	1636 aa	Predicted RBP	8.86	□□□□□ -0.99
RPC53	YDL150W	BRE2	P43132	505 aa		8.85	□□□□□ -0.99
RPC53	YDL150W	PUS5	Q06244	254 aa		8.84	□□□□□ -0.99
RPC53	YDL150W	YDL206W	Q12424	762 aa		8.84	□□□□□ -0.99
RPC53	YDL150W	ESS1	P22696	170 aa		8.83	□□□□□ -1
RPC53	YDL150W	KTR1	P27810	393 aa	Known RBP	8.83	□□□□□ -1
RPC53	YDL150W	TBF1	Q02457	562 aa		8.83	□□□□□ -1
RPC53	YDL150W	ALR1	Q08269	859 aa		8.83	□□□□□ -1
RPC53	YDL150W	MET32	Q12041	191 aa		8.82	□□□□□ -1
RPC53	YDL150W	RSC30	P38781	883 aa		8.81	□□□□□ -1
RPC53	YDL150W	TYW1	Q08960	810 aa	Known RBP	8.81	□□□□□ -1
RPC53	YDL150W	GCR2	Q01722	534 aa		8.8	□□□□□ -1
RPC53	YDL150W	AFT1	P22149	690 aa		8.79	□□□□□ -1
RPC53	YDL150W	YJU3	P28321	313 aa		8.79	□□□□□ -1
RPC53	YDL150W	CSN12	P47130	423 aa		8.78	□□□□□ -1
RPC53	YDL150W	SYH1	Q02875	849 aa	Known RBP	8.77	□□□□□ -1.01
RPC53	YDL150W	KIN1	P13185	1064 aa		8.75	□□□□□ -1.01
RPC53	YDL150W	ASH1	P34233	588 aa		8.75	□□□□□ -1.01
RPC53	YDL150W	RPN1	P38764	993 aa	Known RBP	8.75	□□□□□ -1.01
RPC53	YDL150W	PKH3	Q03306	898 aa	Predicted RBP	8.73	□□□□□ -1.01
RPC53	YDL150W	MRT4	P33201	236 aa	Known RBP	8.7	□□□□□ -1.02
RPC53	YDL150W	HST3	P53687	447 aa		8.7	□□□□□ -1.02
RPC53	YDL150W	VAC17	P25591	423 aa		8.69	□□□□□ -1.02
RPC53	YDL150W	SSA2	P10592	639 aa	Known RBP	8.68	□□□□□ -1.02
RPC53	YDL150W	MSB3	P48566	633 aa	Predicted RBP	8.68	□□□□□ -1.02
RPC53	YDL150W	KIP2	P28743	706 aa		8.67	□□□□□ -1.02
RPC53	YDL150W	IXR1	P33417	597 aa		8.67	□□□□□ -1.02
RPC53	YDL150W	RAD59	Q12223	238 aa		8.67	□□□□□ -1.02
RPC53	YDL150W	ARG8	P18544	423 aa		8.66	□□□□□ -1.02
RPC53	YDL150W	RGA1	P39083	1007 aa		8.66	□□□□□ -1.02
RPC53	YDL150W	ENV9	Q08651	330 aa		8.66	□□□□□ -1.02
RPC53	YDL150W	MET22	P32179	357 aa		8.65	□□□□□ -1.02
RPC53	YDL150W	RTT106	P40161	455 aa		8.65	□□□□□ -1.02
RPC53	YDL150W	YJR115W	P47152	169 aa		8.63	□□□□□ -1.03
RPC53	YDL150W	GUA1	P38625	525 aa	Known RBP	8.59	□□□□□ -1.03
RPC53	YDL150W	FIG4	P42837	879 aa		8.59	□□□□□ -1.03
RPC53	YDL150W	LCB5	Q06147	687 aa	Known RBP	8.58	□□□□□ -1.04

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms