RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A TY1A-DR4O74302 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-HP0C2I4 478 aaKnown RBP3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-AP0CX57 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-PR1P0CX58 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-ORP0CX59 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-PR2P0CX60 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-DR5P0CX65 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-ER2P0CX66 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-GR3P0CX67 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-LR1P0CX68 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-MR2P0CX69 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A PRE3P38624 215 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-JR2P47099 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-DR1Q03856 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A YMR196WQ04336 1088 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-ML1Q04706 440 aaKnown RBP3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-BRQ12217 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-NL2Q12470 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A TY1A-GR2Q12485 440 aa3.92□□□□□ -1.78
VMA9YCL005W-A HST2P53686 357 aa3.91□□□□□ -1.78
VMA9YCL005W-A BNI4P53858 892 aa3.91□□□□□ -1.78
VMA9YCL005W-A PKH3Q03306 898 aaPredicted RBP3.91□□□□□ -1.78
VMA9YCL005W-A TAF7Q05021 590 aa3.91□□□□□ -1.78
VMA9YCL005W-A MMP1Q12372 583 aa3.91□□□□□ -1.78
VMA9YCL005W-A SEC2P17065 759 aa3.9□□□□□ -1.79
VMA9YCL005W-A GLN1P32288 370 aaKnown RBP3.9□□□□□ -1.79
VMA9YCL005W-A SPT23P35210 1082 aa3.9□□□□□ -1.79
VMA9YCL005W-A HPC2Q01448 625 aa3.9□□□□□ -1.79
VMA9YCL005W-A BUD20Q08004 166 aaPredicted RBP3.9□□□□□ -1.79
VMA9YCL005W-A SLY41P22215 453 aa3.89□□□□□ -1.79
VMA9YCL005W-A PTC2P39966 464 aaKnown RBP3.89□□□□□ -1.79
VMA9YCL005W-A CHL1P22516 861 aaPredicted RBP3.88□□□□□ -1.79
VMA9YCL005W-A GCD11P32481 527 aaKnown RBP3.88□□□□□ -1.79
VMA9YCL005W-A YNL115CP53925 644 aa3.88□□□□□ -1.79
VMA9YCL005W-A RAD59Q12223 238 aa3.88□□□□□ -1.79
VMA9YCL005W-A AGE1Q04412 482 aa3.87□□□□□ -1.79
VMA9YCL005W-A SSA2P10592 639 aaKnown RBP3.86□□□□□ -1.79
VMA9YCL005W-A TRM1P15565 570 aaKnown RBP3.86□□□□□ -1.79
VMA9YCL005W-A NPL4P33755 580 aa3.86□□□□□ -1.79
VMA9YCL005W-A RSC30P38781 883 aa3.86□□□□□ -1.79
VMA9YCL005W-A ARG8P18544 423 aa3.85□□□□□ -1.79
VMA9YCL005W-A BIO2P32451 375 aa3.85□□□□□ -1.79
VMA9YCL005W-A BRL1P38770 471 aa3.85□□□□□ -1.79
VMA9YCL005W-A PAC1P39946 494 aaKnown RBP3.85□□□□□ -1.79
VMA9YCL005W-A RTF1P53064 558 aa3.85□□□□□ -1.79
VMA9YCL005W-A TUB4P53378 473 aa3.85□□□□□ -1.79
VMA9YCL005W-A YML082WQ04533 649 aaKnown RBP3.85□□□□□ -1.79
VMA9YCL005W-A ATG32P40458 529 aa3.84□□□□□ -1.79
VMA9YCL005W-A RRN7P40992 514 aa3.84□□□□□ -1.79
VMA9YCL005W-A YJL007CP47080 104 aa3.84□□□□□ -1.79
VMA9YCL005W-A PRT1P06103 763 aaKnown RBP3.83□□□□□ -1.8
VMA9YCL005W-A SDH2P21801 266 aa3.83□□□□□ -1.8
VMA9YCL005W-A VRP1P37370 817 aa3.83□□□□□ -1.8
VMA9YCL005W-A BIM1P40013 344 aa3.83□□□□□ -1.8
VMA9YCL005W-A ERG12P07277 443 aa3.82□□□□□ -1.8
VMA9YCL005W-A YBL036CP38197 257 aa3.82□□□□□ -1.8
VMA9YCL005W-A YDL206WQ12424 762 aa3.82□□□□□ -1.8
VMA9YCL005W-A PUS6P53294 404 aa3.81□□□□□ -1.8
VMA9YCL005W-A LAM6Q08001 693 aa3.81□□□□□ -1.8
VMA9YCL005W-A YDJ1P25491 409 aaKnown RBP3.8□□□□□ -1.8
VMA9YCL005W-A YNL108CP53929 270 aa3.8□□□□□ -1.8
VMA9YCL005W-A GYP1Q08484 637 aa3.8□□□□□ -1.8
VMA9YCL005W-A PDC1P06169 563 aaKnown RBP3.79□□□□□ -1.8
VMA9YCL005W-A TBF1Q02457 562 aa3.79□□□□□ -1.8
VMA9YCL005W-A ITT1Q04638 464 aa3.79□□□□□ -1.8
VMA9YCL005W-A ENO2P00925 437 aaKnown RBP3.78□□□□□ -1.8
VMA9YCL005W-A TIF1P10081 395 aaKnown RBP3.78□□□□□ -1.8
VMA9YCL005W-A MAK16P10962 306 aaPredicted RBP3.78□□□□□ -1.8
VMA9YCL005W-A BCK2P33306 851 aa3.78□□□□□ -1.8
VMA9YCL005W-A BUB1P41695 1021 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
VMA9YCL005W-A SPT16P32558 1035 aaKnown RBP3.77□□□□□ -1.81
VMA9YCL005W-A HGH1P48362 394 aaKnown RBP3.77□□□□□ -1.81
VMA9YCL005W-A RLF2Q12495 606 aa3.77□□□□□ -1.81
VMA9YCL005W-A MOD5P07884 428 aa3.76□□□□□ -1.81
VMA9YCL005W-A SUP45P12385 437 aaKnown RBP3.76□□□□□ -1.81
VMA9YCL005W-A ISF1P32488 338 aa3.76□□□□□ -1.81
VMA9YCL005W-A CST6P40535 587 aa3.76□□□□□ -1.81
VMA9YCL005W-A RPA14P50106 137 aa3.76□□□□□ -1.81
VMA9YCL005W-A YPR204WQ08995 1032 aa3.76□□□□□ -1.81
VMA9YCL005W-A FIG4P42837 879 aa3.75□□□□□ -1.81
VMA9YCL005W-A PUS5Q06244 254 aa3.75□□□□□ -1.81
VMA9YCL005W-A YPR097WQ06839 1073 aa3.75□□□□□ -1.81
VMA9YCL005W-A ENO1P00924 437 aaKnown RBP3.74□□□□□ -1.81
VMA9YCL005W-A CSE4P36012 229 aa3.74□□□□□ -1.81
VMA9YCL005W-A SAS4Q04003 481 aa3.74□□□□□ -1.81
VMA9YCL005W-A RAS1P01119 309 aa3.73□□□□□ -1.81
VMA9YCL005W-A PAT1P25644 796 aaKnown RBP3.73□□□□□ -1.81
VMA9YCL005W-A RTG2P32608 588 aaKnown RBP3.73□□□□□ -1.81
VMA9YCL005W-A RRD1P40454 393 aaKnown RBP3.73□□□□□ -1.81
VMA9YCL005W-A RPL34BP40525 121 aaKnown RBP3.73□□□□□ -1.81
VMA9YCL005W-A HXT10P43581 546 aa3.73□□□□□ -1.81
VMA9YCL005W-A BDP1P46678 594 aa3.73□□□□□ -1.81
VMA9YCL005W-A CLA4P48562 842 aa3.73□□□□□ -1.81
VMA9YCL005W-A KXD1P53158 218 aa3.73□□□□□ -1.81
VMA9YCL005W-A FRK1Q03002 865 aaPredicted RBP3.73□□□□□ -1.81
VMA9YCL005W-A YPR084WQ06821 456 aa3.73□□□□□ -1.81
VMA9YCL005W-A ALR1Q08269 859 aa3.73□□□□□ -1.81
VMA9YCL005W-A MCM16Q12262 181 aa3.73□□□□□ -1.81
VMA9YCL005W-A RDS2P19541 446 aaKnown RBP3.72□□□□□ -1.81
VMA9YCL005W-A CPS1P27614 576 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms