RNA–Protein interactions for RNA: YBR058C-A

TSC3, Transcript of Protein that stimulates the activity of serine palmitoyltransferase, yeastyeast

Gene TSC3, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSC3YBR058C-A TY1A-DR1Q03856 440 aa5.52□□□□□ -1.53
TSC3YBR058C-A TY1A-ML1Q04706 440 aaKnown RBP5.52□□□□□ -1.53
TSC3YBR058C-A TY1A-BRQ12217 440 aa5.52□□□□□ -1.53
TSC3YBR058C-A TY1A-NL2Q12470 440 aa5.52□□□□□ -1.53
TSC3YBR058C-A TY1A-GR2Q12485 440 aa5.52□□□□□ -1.53
TSC3YBR058C-A GLC3P32775 704 aa5.51□□□□□ -1.53
TSC3YBR058C-A SDH2P21801 266 aa5.49□□□□□ -1.53
TSC3YBR058C-A SEC2P17065 759 aa5.48□□□□□ -1.53
TSC3YBR058C-A TEA1P47988 759 aa5.48□□□□□ -1.53
TSC3YBR058C-A PRT1P06103 763 aaKnown RBP5.47□□□□□ -1.53
TSC3YBR058C-A KEX2P13134 814 aa5.47□□□□□ -1.53
TSC3YBR058C-A NIS1P53939 407 aa5.47□□□□□ -1.53
TSC3YBR058C-A ERF2Q06551 359 aa5.47□□□□□ -1.53
TSC3YBR058C-A SIT4P20604 311 aa5.46□□□□□ -1.54
TSC3YBR058C-A NPL4P33755 580 aa5.46□□□□□ -1.54
TSC3YBR058C-A SAS4Q04003 481 aa5.46□□□□□ -1.54
TSC3YBR058C-A GYP1Q08484 637 aa5.46□□□□□ -1.54
TSC3YBR058C-A AIM7Q12156 149 aa5.46□□□□□ -1.54
TSC3YBR058C-A RTF1P53064 558 aa5.44□□□□□ -1.54
TSC3YBR058C-A GCD11P32481 527 aaKnown RBP5.43□□□□□ -1.54
TSC3YBR058C-A ATF2P53296 535 aa5.43□□□□□ -1.54
TSC3YBR058C-A DPS1P04802 557 aaKnown RBP5.42□□□□□ -1.54
TSC3YBR058C-A FPK1P53739 893 aa5.42□□□□□ -1.54
TSC3YBR058C-A AGE1Q04412 482 aa5.42□□□□□ -1.54
TSC3YBR058C-A RRN7P40992 514 aa5.4□□□□□ -1.54
TSC3YBR058C-A YNL115CP53925 644 aa5.4□□□□□ -1.54
TSC3YBR058C-A RPN1P38764 993 aaKnown RBP5.39□□□□□ -1.55
TSC3YBR058C-A PAC1P39946 494 aaKnown RBP5.39□□□□□ -1.55
TSC3YBR058C-A HST2P53686 357 aa5.39□□□□□ -1.55
TSC3YBR058C-A YMR196WQ04336 1088 aa5.39□□□□□ -1.55
TSC3YBR058C-A RAS1P01119 309 aa5.38□□□□□ -1.55
TSC3YBR058C-A AMS1P22855 1083 aa5.38□□□□□ -1.55
TSC3YBR058C-A KIN1P13185 1064 aa5.37□□□□□ -1.55
TSC3YBR058C-A KTR1P27810 393 aaKnown RBP5.37□□□□□ -1.55
TSC3YBR058C-A MRF1P30775 413 aaPredicted RBP5.37□□□□□ -1.55
TSC3YBR058C-A TUB4P53378 473 aa5.37□□□□□ -1.55
TSC3YBR058C-A CST6P40535 587 aa5.36□□□□□ -1.55
TSC3YBR058C-A SRC1Q03707 834 aa5.36□□□□□ -1.55
TSC3YBR058C-A YEL077CQ3E7X8 1277 aa5.36□□□□□ -1.55
TSC3YBR058C-A SLY41P22215 453 aa5.35□□□□□ -1.55
TSC3YBR058C-A SCJ1P25303 377 aa5.35□□□□□ -1.55
TSC3YBR058C-A SPT16P32558 1035 aaKnown RBP5.35□□□□□ -1.55
TSC3YBR058C-A GLN1P32288 370 aaKnown RBP5.34□□□□□ -1.55
TSC3YBR058C-A LAM6Q08001 693 aa5.34□□□□□ -1.55
TSC3YBR058C-A MMP1Q12372 583 aa5.34□□□□□ -1.55
TSC3YBR058C-A ERG12P07277 443 aa5.33□□□□□ -1.56
TSC3YBR058C-A MOD5P07884 428 aa5.33□□□□□ -1.56
TSC3YBR058C-A ESS1P22696 170 aa5.33□□□□□ -1.56
TSC3YBR058C-A PAT1P25644 796 aaKnown RBP5.33□□□□□ -1.56
TSC3YBR058C-A TYW1Q08960 810 aaKnown RBP5.33□□□□□ -1.56
TSC3YBR058C-A TRM1P15565 570 aaKnown RBP5.31□□□□□ -1.56
TSC3YBR058C-A YJU3P28321 313 aa5.31□□□□□ -1.56
TSC3YBR058C-A BDP1P46678 594 aa5.31□□□□□ -1.56
TSC3YBR058C-A CSN12P47130 423 aa5.31□□□□□ -1.56
TSC3YBR058C-A PDC1P06169 563 aaKnown RBP5.29□□□□□ -1.56
TSC3YBR058C-A CLA4P48562 842 aa5.29□□□□□ -1.56
TSC3YBR058C-A PUS6P53294 404 aa5.29□□□□□ -1.56
TSC3YBR058C-A FRK1Q03002 865 aaPredicted RBP5.29□□□□□ -1.56
TSC3YBR058C-A YDL206WQ12424 762 aa5.29□□□□□ -1.56
TSC3YBR058C-A TPD3P31383 635 aa5.28□□□□□ -1.56
TSC3YBR058C-A RSC30P38781 883 aa5.28□□□□□ -1.56
TSC3YBR058C-A RRD1P40454 393 aaKnown RBP5.28□□□□□ -1.56
TSC3YBR058C-A BUB1P41695 1021 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
TSC3YBR058C-A GUA1P38625 525 aaKnown RBP5.27□□□□□ -1.57
TSC3YBR058C-A RPA14P50106 137 aa5.27□□□□□ -1.57
TSC3YBR058C-A TBF1Q02457 562 aa5.27□□□□□ -1.57
TSC3YBR058C-A PKH3Q03306 898 aaPredicted RBP5.27□□□□□ -1.57
TSC3YBR058C-A KXD1P53158 218 aa5.26□□□□□ -1.57
TSC3YBR058C-A SSA2P10592 639 aaKnown RBP5.25□□□□□ -1.57
TSC3YBR058C-A AIR1P40507 360 aaKnown RBP5.25□□□□□ -1.57
TSC3YBR058C-A HXT10P43581 546 aa5.25□□□□□ -1.57
TSC3YBR058C-A YPR097WQ06839 1073 aa5.25□□□□□ -1.57
TSC3YBR058C-A RAD59Q12223 238 aa5.24□□□□□ -1.57
TSC3YBR058C-A PUS5Q06244 254 aa5.23□□□□□ -1.57
TSC3YBR058C-A ALR1Q08269 859 aa5.23□□□□□ -1.57
TSC3YBR058C-A TRK1P12685 1235 aa5.22□□□□□ -1.57
TSC3YBR058C-A ARG8P18544 423 aa5.22□□□□□ -1.57
TSC3YBR058C-A HPC2Q01448 625 aa5.22□□□□□ -1.57
TSC3YBR058C-A HED1Q03937 162 aa5.22□□□□□ -1.57
TSC3YBR058C-A LEO1P38439 464 aa5.21□□□□□ -1.58
TSC3YBR058C-A CDC4P07834 779 aa5.2□□□□□ -1.58
TSC3YBR058C-A MET32Q12041 191 aa5.19□□□□□ -1.58
TSC3YBR058C-A TFB3Q03290 321 aa5.18□□□□□ -1.58
TSC3YBR058C-A MAK16P10962 306 aaPredicted RBP5.17□□□□□ -1.58
TSC3YBR058C-A VAC17P25591 423 aa5.16□□□□□ -1.58
TSC3YBR058C-A SYH1Q02875 849 aaKnown RBP5.16□□□□□ -1.58
TSC3YBR058C-A FIG4P42837 879 aa5.15□□□□□ -1.59
TSC3YBR058C-A PKC1P24583 1151 aa5.14□□□□□ -1.59
TSC3YBR058C-A BRL1P38770 471 aa5.14□□□□□ -1.59
TSC3YBR058C-A YPR084WQ06821 456 aa5.14□□□□□ -1.59
TSC3YBR058C-A BRE2P43132 505 aa5.13□□□□□ -1.59
TSC3YBR058C-A AFT1P22149 690 aa5.12□□□□□ -1.59
TSC3YBR058C-A KIP2P28743 706 aa5.12□□□□□ -1.59
TSC3YBR058C-A BIO2P32451 375 aa5.12□□□□□ -1.59
TSC3YBR058C-A MRT4P33201 236 aaKnown RBP5.12□□□□□ -1.59
TSC3YBR058C-A IXR1P33417 597 aa5.12□□□□□ -1.59
TSC3YBR058C-A NAF1P53919 492 aaKnown RBP5.12□□□□□ -1.59
TSC3YBR058C-A TEC1P18412 486 aa5.11□□□□□ -1.59
TSC3YBR058C-A CSE4P36012 229 aa5.11□□□□□ -1.59
TSC3YBR058C-A YBL036CP38197 257 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms