RNA–Protein interactions for RNA: YBR056C-B

YBR056C-B, Transcript of Dubious open reading frame, yeastyeast

Gene YBR056C-B, Length 159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR056C-BYBR056C-B YBT1P32386 1661 aa9.21□□□□□ -0.93
YBR056C-BYBR056C-B MAK11P20484 414 aaKnown RBP9.18□□□□□ -0.94
YBR056C-BYBR056C-B CKB1P43639 278 aa9.18□□□□□ -0.94
YBR056C-BYBR056C-B GEA1P47102 1408 aaPredicted RBP9.16□□□□□ -0.94
YBR056C-BYBR056C-B SET1P38827 1080 aaKnown RBP9.16□□□□□ -0.94
YBR056C-BYBR056C-B TGL3P40308 642 aa9.16□□□□□ -0.94
YBR056C-BYBR056C-B YMR1P47147 688 aaKnown RBP RIP-Chip data9.15□□□□□ -0.94not detected
YBR056C-BYBR056C-B YMR196WQ04336 1088 aa9.13□□□□□ -0.95
YBR056C-BYBR056C-B TY1B-NL2Q99337 1749 aaKnown RBP9.11□□□□□ -0.95
YBR056C-BYBR056C-B STS1P38637 319 aa9.11□□□□□ -0.95
YBR056C-BYBR056C-B YOR238WQ08634 303 aa9.1□□□□□ -0.95
YBR056C-BYBR056C-B HAP1P0CE41 1502 aa9.1□□□□□ -0.95
YBR056C-BYBR056C-B NSR1P27476 414 aaKnown RBP RIP-Chip data9.09□□□□□ -0.95not detected
YBR056C-BYBR056C-B DBP1P24784 617 aaKnown RBP9.08□□□□□ -0.96
YBR056C-BYBR056C-B THI12P42883 340 aa9.08□□□□□ -0.96
YBR056C-BYBR056C-B THI5P43534 340 aa9.08□□□□□ -0.96
YBR056C-BYBR056C-B THI11P47183 340 aa9.08□□□□□ -0.96
YBR056C-BYBR056C-B THI13Q07748 340 aa9.08□□□□□ -0.96
YBR056C-BYBR056C-B IML1P47170 1584 aa9.07□□□□□ -0.96
YBR056C-BYBR056C-B COQ8P27697 501 aa9.06□□□□□ -0.96
YBR056C-BYBR056C-B YAP5P40574 245 aa9.06□□□□□ -0.96
YBR056C-BYBR056C-B NUP188P52593 1655 aaKnown RBP9.06□□□□□ -0.96
YBR056C-BYBR056C-B IPL1P38991 367 aa9.05□□□□□ -0.96
YBR056C-BYBR056C-B YPR148CQ06523 435 aa9.03□□□□□ -0.96
YBR056C-BYBR056C-B PIB1Q06651 286 aa9.03□□□□□ -0.96
YBR056C-BYBR056C-B VPS70P47161 811 aa9□□□□□ -0.97
YBR056C-BYBR056C-B VMR1P38735 1592 aa8.99□□□□□ -0.97
YBR056C-BYBR056C-B EDS1P38073 919 aa8.99□□□□□ -0.97
YBR056C-BYBR056C-B SRB8P25648 1427 aa8.98□□□□□ -0.97
YBR056C-BYBR056C-B GLN1P32288 370 aaKnown RBP8.97□□□□□ -0.97
YBR056C-BYBR056C-B LEU3P08638 886 aa8.95□□□□□ -0.98
YBR056C-BYBR056C-B TYS1P36421 394 aaKnown RBP8.95□□□□□ -0.98
YBR056C-BYBR056C-B NOP53Q12080 455 aaKnown RBP8.94□□□□□ -0.98
YBR056C-BYBR056C-B BUD21Q08492 214 aaPredicted RBP8.92□□□□□ -0.98
YBR056C-BYBR056C-B VMA1P17255 1071 aaKnown RBP8.91□□□□□ -0.98
YBR056C-BYBR056C-B PTC3P34221 468 aaKnown RBP8.9□□□□□ -0.98
YBR056C-BYBR056C-B MST1P07236 462 aa8.89□□□□□ -0.99
YBR056C-BYBR056C-B LEO1P38439 464 aa8.87□□□□□ -0.99
YBR056C-BYBR056C-B SPB4P25808 606 aaPredicted RBP8.86□□□□□ -0.99
YBR056C-BYBR056C-B APP1P53933 587 aa8.85□□□□□ -0.99
YBR056C-BYBR056C-B GTT3P39996 337 aa8.84□□□□□ -0.99
YBR056C-BYBR056C-B PDR5P33302 1511 aaKnown RBP8.84□□□□□ -0.99
YBR056C-BYBR056C-B SAM3Q08986 587 aa8.8□□□□□ -1
YBR056C-BYBR056C-B PBS2P08018 668 aa8.79□□□□□ -1
YBR056C-BYBR056C-B ATH1P48016 1211 aa8.78□□□□□ -1
YBR056C-BYBR056C-B GRE2Q12068 342 aaKnown RBP8.78□□□□□ -1
YBR056C-BYBR056C-B REF2P42073 533 aaPredicted RBP8.77□□□□□ -1.01
YBR056C-BYBR056C-B BCK1Q01389 1478 aa8.77□□□□□ -1.01
YBR056C-BYBR056C-B DSF2P38213 736 aa8.76□□□□□ -1.01
YBR056C-BYBR056C-B CFT1Q06632 1357 aaKnown RBP8.75□□□□□ -1.01
YBR056C-BYBR056C-B YMR074CQ04773 145 aa8.75□□□□□ -1.01
YBR056C-BYBR056C-B PDR11P40550 1411 aa8.74□□□□□ -1.01
YBR056C-BYBR056C-B GUT1P32190 709 aa8.74□□□□□ -1.01
YBR056C-BYBR056C-B GYP5Q12344 894 aa8.74□□□□□ -1.01
YBR056C-BYBR056C-B KRE5P22023 1365 aa8.73□□□□□ -1.01
YBR056C-BYBR056C-B YOL036WQ08206 761 aa8.73□□□□□ -1.01
YBR056C-BYBR056C-B MRX12P47084 519 aa8.72□□□□□ -1.01
YBR056C-BYBR056C-B RIA1P53893 1110 aa8.72□□□□□ -1.01
YBR056C-BYBR056C-B YNR029CP53729 429 aaKnown RBP8.71□□□□□ -1.02
YBR056C-BYBR056C-B RPN1P38764 993 aaKnown RBP8.69□□□□□ -1.02
YBR056C-BYBR056C-B SET4P42948 560 aa8.69□□□□□ -1.02
YBR056C-BYBR056C-B WSC3Q12215 556 aa8.68□□□□□ -1.02
YBR056C-BYBR056C-B MAM3Q12296 706 aa8.68□□□□□ -1.02
YBR056C-BYBR056C-B DCW1P36091 449 aa8.67□□□□□ -1.02
YBR056C-BYBR056C-B VHR2P40041 505 aa8.67□□□□□ -1.02
YBR056C-BYBR056C-B ENT1Q12518 454 aa8.67□□□□□ -1.02
YBR056C-BYBR056C-B GCN2P15442 1659 aa8.66□□□□□ -1.02
YBR056C-BYBR056C-B YGR273CP53329 174 aa8.65□□□□□ -1.02
YBR056C-BYBR056C-B ENV9Q08651 330 aa8.65□□□□□ -1.02
YBR056C-BYBR056C-B SOL3P38858 249 aa8.64□□□□□ -1.03
YBR056C-BYBR056C-B IES2P40154 320 aa8.64□□□□□ -1.03
YBR056C-BYBR056C-B MAK21Q12176 1025 aaKnown RBP8.64□□□□□ -1.03
YBR056C-BYBR056C-B MSB4Q12317 492 aa8.64□□□□□ -1.03
YBR056C-BYBR056C-B COX6P00427 148 aa8.63□□□□□ -1.03
YBR056C-BYBR056C-B UBP14P38237 781 aaKnown RBP8.63□□□□□ -1.03
YBR056C-BYBR056C-B YLR326WQ06170 240 aaKnown RBP8.63□□□□□ -1.03
YBR056C-BYBR056C-B IMH1Q06704 911 aaKnown RBP8.62□□□□□ -1.03
YBR056C-BYBR056C-B YBL029C-AQ3E756 94 aa8.62□□□□□ -1.03
YBR056C-BYBR056C-B YRF1-2P40105 1681 aa8.62□□□□□ -1.03
YBR056C-BYBR056C-B HTA1P04911 132 aaKnown RBP8.61□□□□□ -1.03
YBR056C-BYBR056C-B HTA2P04912 132 aa8.61□□□□□ -1.03
YBR056C-BYBR056C-B BUD31P25337 157 aaPredicted RBP8.61□□□□□ -1.03
YBR056C-BYBR056C-B YDR090CQ03193 310 aa8.61□□□□□ -1.03
YBR056C-BYBR056C-B NUP192P47054 1683 aa8.61□□□□□ -1.03
YBR056C-BYBR056C-B NST1P53935 1240 aa8.59□□□□□ -1.03
YBR056C-BYBR056C-B NUP42P49686 430 aaKnown RBP8.58□□□□□ -1.04
YBR056C-BYBR056C-B YNR021WP53723 404 aaKnown RBP8.58□□□□□ -1.04
YBR056C-BYBR056C-B KEX1P09620 729 aa8.57□□□□□ -1.04
YBR056C-BYBR056C-B VNX1P42839 908 aa8.57□□□□□ -1.04
YBR056C-BYBR056C-B RRP5Q05022 1729 aaKnown RBP8.57□□□□□ -1.04
YBR056C-BYBR056C-B DIT2P21595 489 aa8.56□□□□□ -1.04
YBR056C-BYBR056C-B TY3B-IQ7LHG5 1498 aaKnown RBP8.56□□□□□ -1.04
YBR056C-BYBR056C-B RAD54P32863 898 aa8.55□□□□□ -1.04
YBR056C-BYBR056C-B KIC1P38692 1080 aa8.55□□□□□ -1.04
YBR056C-BYBR056C-B CAB1Q04430 367 aa8.55□□□□□ -1.04
YBR056C-BYBR056C-B EAP1P36041 632 aaKnown RBP8.54□□□□□ -1.04
YBR056C-BYBR056C-B UBP9P39967 754 aa8.54□□□□□ -1.04
YBR056C-BYBR056C-B IKI3Q06706 1349 aaKnown RBP8.54□□□□□ -1.04
YBR056C-BYBR056C-B GLC3P32775 704 aa8.53□□□□□ -1.04
YBR056C-BYBR056C-B PCS60P38137 543 aaKnown RBP RIP-Chip data8.53□□□□□ -1.04not detected
Retrieved 100 of 5,963 RNA–protein pairs in 7.1 ms