RNA–Protein interactions for RNA: RDN25-2

RDN25-2, Transcript of 25S ribosomal RNA (25S rRNA), yeastyeast

Gene RDN25-2, Length 3,396 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN25-2RDN25-2 SWE1P32944 819 aa11.86□□□□□ -0.51
RDN25-2RDN25-2 VPS27P40343 622 aaKnown RBP11.85□□□□□ -0.51
RDN25-2RDN25-2 YOR093CQ12275 1648 aa11.85□□□□□ -0.51
RDN25-2RDN25-2 NUG1P40010 520 aaKnown RBP11.84□□□□□ -0.51
RDN25-2RDN25-2 CDC45Q08032 650 aa11.84□□□□□ -0.51
RDN25-2RDN25-2 CHZ1P40019 153 aaPredicted RBP11.84□□□□□ -0.51
RDN25-2RDN25-2 NAP1P25293 417 aaKnown RBP11.83□□□□□ -0.52
RDN25-2RDN25-2 MPP10P47083 593 aaKnown RBP11.83□□□□□ -0.52
RDN25-2RDN25-2 PDR5P33302 1511 aaKnown RBP11.83□□□□□ -0.52
RDN25-2RDN25-2 TAF8Q03750 510 aa11.82□□□□□ -0.52
RDN25-2RDN25-2 DJP1P40564 432 aa11.81□□□□□ -0.52
RDN25-2RDN25-2 SUI2P20459 304 aaKnown RBP11.8□□□□□ -0.52
RDN25-2RDN25-2 YAP3P38749 330 aa11.8□□□□□ -0.52
RDN25-2RDN25-2 SNF7P39929 240 aaKnown RBP11.79□□□□□ -0.52
RDN25-2RDN25-2 RAD26P40352 1085 aa11.78□□□□□ -0.52
RDN25-2RDN25-2 TYS1P36421 394 aaKnown RBP11.78□□□□□ -0.52
RDN25-2RDN25-2 YEF3P16521 1044 aaKnown RBP11.77□□□□□ -0.53
RDN25-2RDN25-2 NOP53Q12080 455 aaKnown RBP11.75□□□□□ -0.53
RDN25-2RDN25-2 YPP1P46951 817 aa11.74□□□□□ -0.53
RDN25-2RDN25-2 SEC7P11075 2009 aaKnown RBP11.74□□□□□ -0.53
RDN25-2RDN25-2 CTR9P89105 1077 aa11.73□□□□□ -0.53
RDN25-2RDN25-2 SPT2P06843 333 aaPredicted RBP11.72□□□□□ -0.53
RDN25-2RDN25-2 VMR1P38735 1592 aa11.72□□□□□ -0.53
RDN25-2RDN25-2 DAL5P15365 543 aa11.71□□□□□ -0.53
RDN25-2RDN25-2 YRB30P53107 440 aaPredicted RBP11.71□□□□□ -0.53
RDN25-2RDN25-2 RAD9P14737 1309 aa11.71□□□□□ -0.53
RDN25-2RDN25-2 CHC1P22137 1653 aaKnown RBP11.71□□□□□ -0.53
RDN25-2RDN25-2 CAB1Q04430 367 aa11.7□□□□□ -0.54
RDN25-2RDN25-2 DOP1Q03921 1698 aa11.7□□□□□ -0.54
RDN25-2RDN25-2 RPP0P05317 312 aaKnown RBP11.69□□□□□ -0.54
RDN25-2RDN25-2 ROX1P25042 368 aa11.69□□□□□ -0.54
RDN25-2RDN25-2 FKH1P40466 484 aa11.68□□□□□ -0.54
RDN25-2RDN25-2 NUP192P47054 1683 aa11.68□□□□□ -0.54
RDN25-2RDN25-2 RTR1P40084 226 aaPredicted RBP11.67□□□□□ -0.54
RDN25-2RDN25-2 MLP1Q02455 1875 aaKnown RBP11.67□□□□□ -0.54
RDN25-2RDN25-2 SLN1P39928 1220 aaPredicted RBP11.66□□□□□ -0.54
RDN25-2RDN25-2 RRP46P53256 223 aaPredicted RBP11.66□□□□□ -0.54
RDN25-2RDN25-2 CSE4P36012 229 aa11.66□□□□□ -0.54
RDN25-2RDN25-2 DOS2P54858 310 aa11.66□□□□□ -0.54
RDN25-2RDN25-2 IML1P47170 1584 aa11.66□□□□□ -0.54
RDN25-2RDN25-2 TPD3P31383 635 aa11.65□□□□□ -0.54
RDN25-2RDN25-2 RLF2Q12495 606 aa11.64□□□□□ -0.55
RDN25-2RDN25-2 SAP155P43612 1002 aa11.64□□□□□ -0.55
RDN25-2RDN25-2 PAP2P53632 584 aaKnown RBP11.62□□□□□ -0.55
RDN25-2RDN25-2 NOP58Q12499 511 aaKnown RBP11.62□□□□□ -0.55
RDN25-2RDN25-2 CLB5P30283 435 aa11.62□□□□□ -0.55
RDN25-2RDN25-2 ALD4P46367 519 aaKnown RBP11.62□□□□□ -0.55
RDN25-2RDN25-2 RAD2P07276 1031 aa11.61□□□□□ -0.55
RDN25-2RDN25-2 MET5P47169 1442 aa11.6□□□□□ -0.55
RDN25-2RDN25-2 IPL1P38991 367 aa11.59□□□□□ -0.55
RDN25-2RDN25-2 NAB6Q03735 1134 aaKnown RBP RIP-Chip data11.59□□□□□ -0.55not detected
RDN25-2RDN25-2 SPC110P32380 944 aa11.58□□□□□ -0.56
RDN25-2RDN25-2 KAR2P16474 682 aaKnown RBP11.57□□□□□ -0.56
RDN25-2RDN25-2 RLP24Q07915 199 aaKnown RBP11.57□□□□□ -0.56
RDN25-2RDN25-2 PCT1P13259 424 aa11.56□□□□□ -0.56
RDN25-2RDN25-2 THI22Q06490 572 aa11.56□□□□□ -0.56
RDN25-2RDN25-2 PUF6Q04373 656 aaKnown RBP11.56□□□□□ -0.56
RDN25-2RDN25-2 POL32P47110 350 aa11.56□□□□□ -0.56
RDN25-2RDN25-2 HIM1Q06674 414 aa11.56□□□□□ -0.56
RDN25-2RDN25-2 DNF2Q12675 1612 aa11.55□□□□□ -0.56
RDN25-2RDN25-2 RCM1P53972 490 aa11.55□□□□□ -0.56
RDN25-2RDN25-2 YIL092WP40497 633 aa11.54□□□□□ -0.56
RDN25-2RDN25-2 NUP188P52593 1655 aaKnown RBP11.53□□□□□ -0.56
RDN25-2RDN25-2 SCT1P32784 759 aa11.53□□□□□ -0.56
RDN25-2RDN25-2 GRX3Q03835 250 aa11.53□□□□□ -0.56
RDN25-2RDN25-2 YML133CQ03099 1374 aa11.53□□□□□ -0.56
RDN25-2RDN25-2 YLL067CQ07888 1374 aa11.53□□□□□ -0.56
RDN25-2RDN25-2 YLL066CQ99208 1374 aa11.53□□□□□ -0.56
RDN25-2RDN25-2 ABP1P15891 592 aaKnown RBP11.52□□□□□ -0.57
RDN25-2RDN25-2 PRD1P25375 712 aa11.52□□□□□ -0.57
RDN25-2RDN25-2 NMD2P38798 1089 aaKnown RBP11.52□□□□□ -0.57
RDN25-2RDN25-2 RTT109Q07794 436 aa11.51□□□□□ -0.57
RDN25-2RDN25-2 MSH3P25336 1018 aa11.51□□□□□ -0.57
RDN25-2RDN25-2 PPH3P32345 308 aa11.49□□□□□ -0.57
RDN25-2RDN25-2 DSN1P40568 576 aa11.48□□□□□ -0.57
RDN25-2RDN25-2 YIR014WP40570 242 aa11.48□□□□□ -0.57
RDN25-2RDN25-2 SPB4P25808 606 aaPredicted RBP11.47□□□□□ -0.57
RDN25-2RDN25-2 SMC3P47037 1230 aa11.47□□□□□ -0.57
RDN25-2RDN25-2 RIX1P38883 763 aaPredicted RBP11.46□□□□□ -0.57
RDN25-2RDN25-2 IOC4Q04213 475 aa11.46□□□□□ -0.57
RDN25-2RDN25-2 KRE5P22023 1365 aa11.46□□□□□ -0.58
RDN25-2RDN25-2 HEF3P53978 1044 aaKnown RBP11.46□□□□□ -0.58
RDN25-2RDN25-2 BCK1Q01389 1478 aa11.45□□□□□ -0.58
RDN25-2RDN25-2 ETT1Q08421 412 aaKnown RBP11.45□□□□□ -0.58
RDN25-2RDN25-2 KNS1P32350 737 aaPredicted RBP11.44□□□□□ -0.58
RDN25-2RDN25-2 SNF2P22082 1703 aa11.44□□□□□ -0.58
RDN25-2RDN25-2 ARL1P38116 183 aaKnown RBP11.44□□□□□ -0.58
RDN25-2RDN25-2 YGL081WP53156 320 aa11.44□□□□□ -0.58
RDN25-2RDN25-2 YNL011CP53980 444 aa11.44□□□□□ -0.58
RDN25-2RDN25-2 YBR287WP38355 427 aa11.44□□□□□ -0.58
RDN25-2RDN25-2 GAS4Q08271 471 aa11.44□□□□□ -0.58
RDN25-2RDN25-2 ILV3P39522 585 aaKnown RBP11.43□□□□□ -0.58
RDN25-2RDN25-2 MRX12P47084 519 aa11.42□□□□□ -0.58
RDN25-2RDN25-2 BUB1P41695 1021 aaKnown RBP RIP-Chip data11.42□□□□□ -0.58not detected
RDN25-2RDN25-2 RIA1P53893 1110 aa11.41□□□□□ -0.58
RDN25-2RDN25-2 ECM16Q04217 1267 aaKnown RBP11.41□□□□□ -0.58
RDN25-2RDN25-2 VPS24P36095 224 aaKnown RBP11.41□□□□□ -0.58
RDN25-2RDN25-2 TRP5P00931 707 aaKnown RBP11.4□□□□□ -0.58
RDN25-2RDN25-2 SIC1P38634 284 aa11.4□□□□□ -0.58
RDN25-2RDN25-2 MSH4P40965 878 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms