RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 TRIM52Q96A61 297 aa25.76■■□□□ 1.71
PHGDH-226ENST00000641756 PLEKHD1A6NEE1 506 aa25.76■■□□□ 1.71
PHGDH-226ENST00000641756 CAMSAP2Q08AD1 1489 aa25.76■■□□□ 1.71
PHGDH-226ENST00000641756 ZNF777Q9ULD5 760 aaPredicted RBP25.73■■□□□ 1.71
PHGDH-226ENST00000641756 ROCK1Q13464 1354 aa25.72■■□□□ 1.71
PHGDH-226ENST00000641756 PPP1R15AO75807 674 aaPredicted RBP25.72■■□□□ 1.71
PHGDH-226ENST00000641756 TONSLQ96HA7 1378 aa25.72■■□□□ 1.71
PHGDH-226ENST00000641756 SHROOM2Q13796 1616 aa25.7■■□□□ 1.71
PHGDH-226ENST00000641756 DENND4BO75064 1496 aaPredicted RBP25.69■■□□□ 1.7
PHGDH-226ENST00000641756 ACIN1Q9UKV3 1341 aaKnown RBP25.66■■□□□ 1.7
PHGDH-226ENST00000641756 ABCC10Q5T3U5 1492 aa25.66■■□□□ 1.7
PHGDH-226ENST00000641756 CDC42BPAQ5VT25 1732 aa25.66■■□□□ 1.7
PHGDH-226ENST00000641756 YTHDC1Q96MU7 727 aaKnown RBP25.66■■□□□ 1.7
PHGDH-226ENST00000641756 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
PHGDH-226ENST00000641756 CENPBP07199 599 aaPredicted RBP25.64■■□□□ 1.7
PHGDH-226ENST00000641756 MPHOSPH9Q99550 1183 aa25.64■■□□□ 1.7
PHGDH-226ENST00000641756 SCAF1Q9H7N4 1312 aaKnown RBP25.63■■□□□ 1.69
PHGDH-226ENST00000641756 CROCC2H7BZ55 1655 aa25.59■■□□□ 1.69
PHGDH-226ENST00000641756 ADGBQ8N7X0 1667 aa25.59■■□□□ 1.69
PHGDH-226ENST00000641756 FOXD1Q16676 465 aa25.58■■□□□ 1.69
PHGDH-226ENST00000641756 NCOA1Q15788 1441 aa25.56■■□□□ 1.68
PHGDH-226ENST00000641756 HIRIP3Q9BW71 556 aaPredicted RBP25.55■■□□□ 1.68
PHGDH-226ENST00000641756 KDM5BQ9UGL1 1544 aa25.54■■□□□ 1.68
PHGDH-226ENST00000641756 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
PHGDH-226ENST00000641756 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
PHGDH-226ENST00000641756 ABCC2Q92887 1545 aa25.5■■□□□ 1.67
PHGDH-226ENST00000641756 ANKRD30AQ9BXX3 1397 aa25.49■■□□□ 1.67
PHGDH-226ENST00000641756 SLC4A1APQ9BWU0 796 aaKnown RBP25.49■■□□□ 1.67
PHGDH-226ENST00000641756 HNRNPMP52272 730 aaKnown RBP eCLIP25.46■■□□□ 1.671e-6■■■■□ 22.8
PHGDH-226ENST00000641756 CDC42BPBQ9Y5S2 1711 aa25.46■■□□□ 1.67
PHGDH-226ENST00000641756 C9orf84Q5VXU9 1444 aa25.45■■□□□ 1.66
PHGDH-226ENST00000641756 ANKRD30BQ9BXX2 1392 aa25.45■■□□□ 1.66
PHGDH-226ENST00000641756 PREX2Q70Z35 1606 aa25.45■■□□□ 1.66
PHGDH-226ENST00000641756 DDX10Q13206 875 aaKnown RBP25.44■■□□□ 1.66
PHGDH-226ENST00000641756 PZPP20742 1482 aa25.44■■□□□ 1.66
PHGDH-226ENST00000641756 SHANK2Q9UPX8 1470 aa25.44■■□□□ 1.66
PHGDH-226ENST00000641756 TTC37Q6PGP7 1564 aa25.42■■□□□ 1.66
PHGDH-226ENST00000641756 SAMD9LQ8IVG5 1584 aa25.42■■□□□ 1.66
PHGDH-226ENST00000641756 ANKRD50Q9ULJ7 1429 aa25.41■■□□□ 1.66
PHGDH-226ENST00000641756 TSPY4P0CV99 314 aa25.4■■□□□ 1.66
PHGDH-226ENST00000641756 TSPY10P0CW01 314 aa25.4■■□□□ 1.66
PHGDH-226ENST00000641756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.4■■□□□ 1.66
PHGDH-226ENST00000641756 ARHGEF5Q12774 1597 aa25.39■■□□□ 1.66
PHGDH-226ENST00000641756 MBD5Q9P267 1494 aa25.39■■□□□ 1.66
PHGDH-226ENST00000641756 L3MBTL2Q969R5 705 aa25.39■■□□□ 1.65
PHGDH-226ENST00000641756 RPRD2Q5VT52 1461 aaKnown RBP25.37■■□□□ 1.65
PHGDH-226ENST00000641756 KCNH8Q96L42 1107 aa25.37■■□□□ 1.65
PHGDH-226ENST00000641756 ZCCHC11Q5TAX3 1644 aaKnown RBP25.36■■□□□ 1.65
PHGDH-226ENST00000641756 ARHGAP5Q13017 1502 aa25.35■■□□□ 1.65
PHGDH-226ENST00000641756 CCDC141Q6ZP82 1450 aa25.34■■□□□ 1.65
PHGDH-226ENST00000641756 GTF3C3Q9Y5Q9 886 aa25.33■■□□□ 1.64
PHGDH-226ENST00000641756 KIF15Q9NS87 1388 aa25.32■■□□□ 1.64
PHGDH-226ENST00000641756 UHRF1BP1LA0JNW5 1464 aa25.32■■□□□ 1.64
PHGDH-226ENST00000641756 SYCP2Q9BX26 1530 aa25.31■■□□□ 1.64
PHGDH-226ENST00000641756 MYO5CQ9NQX4 1742 aa25.3■■□□□ 1.64
PHGDH-226ENST00000641756 PKD2Q13563 968 aa25.3■■□□□ 1.64
PHGDH-226ENST00000641756 KIAA1107Q9UPP5 1409 aa25.3■■□□□ 1.64
PHGDH-226ENST00000641756 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
PHGDH-226ENST00000641756 NUP155O75694 1391 aa25.28■■□□□ 1.64
PHGDH-226ENST00000641756 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
PHGDH-226ENST00000641756 HSPA5P11021 654 aaKnown RBP25.25■■□□□ 1.63
PHGDH-226ENST00000641756 NBPF8Q3BBV2 869 aa25.24■■□□□ 1.63
PHGDH-226ENST00000641756 KDM5DQ9BY66 1539 aa25.2■■□□□ 1.63
PHGDH-226ENST00000641756 EIF4G2P78344 907 aaKnown RBP eCLIP25.19■■□□□ 1.627e-14■■■■■ 63.8
PHGDH-226ENST00000641756 PLCH2O75038 1416 aa25.19■■□□□ 1.62
PHGDH-226ENST00000641756 PLEKHH2Q8IVE3 1493 aa25.18■■□□□ 1.62
PHGDH-226ENST00000641756 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
PHGDH-226ENST00000641756 ARHGEF12Q9NZN5 1544 aa25.18■■□□□ 1.62
PHGDH-226ENST00000641756 EFCAB2Q5VUJ9 269 aa25.13■■□□□ 1.61
PHGDH-226ENST00000641756 ANP32CO43423 234 aa25.12■■□□□ 1.61
PHGDH-226ENST00000641756 WASHC2AQ641Q2 1341 aa25.12■■□□□ 1.61
PHGDH-226ENST00000641756 FAM135AQ9P2D6 1515 aa25.1■■□□□ 1.61
PHGDH-226ENST00000641756 PLXNC1O60486 1568 aa25.1■■□□□ 1.61
PHGDH-226ENST00000641756 ABCC1P33527 1531 aa25.09■■□□□ 1.61
PHGDH-226ENST00000641756 WDR7Q9Y4E6 1490 aa25.07■■□□□ 1.6
PHGDH-226ENST00000641756 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
PHGDH-226ENST00000641756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.06■■□□□ 1.65e-16■■□□□ 13.6
PHGDH-226ENST00000641756 TRAPPC8Q9Y2L5 1435 aa25.05■■□□□ 1.6
PHGDH-226ENST00000641756 UNC13BO14795 1591 aa25.05■■□□□ 1.6
PHGDH-226ENST00000641756 C11orf95C9JLR9 678 aaPredicted RBP25.03■■□□□ 1.6
PHGDH-226ENST00000641756 OSCARQ8IYS5 282 aa25.03■■□□□ 1.6
PHGDH-226ENST00000641756 DUOX2Q9NRD8 1548 aa25.02■■□□□ 1.6
PHGDH-226ENST00000641756 CCER2I3L3R5 266 aa25.01■■□□□ 1.59
PHGDH-226ENST00000641756 SPATA31E1Q6ZUB1 1445 aa25.01■■□□□ 1.59
PHGDH-226ENST00000641756 ARAP3Q8WWN8 1544 aa24.99■■□□□ 1.59
PHGDH-226ENST00000641756 CCDC7Q96M83 1385 aa24.98■■□□□ 1.59
PHGDH-226ENST00000641756 AFAP1Q8N556 730 aa24.97■■□□□ 1.59
PHGDH-226ENST00000641756 ERBINQ96RT1 1412 aa24.97■■□□□ 1.59
PHGDH-226ENST00000641756 ASXL2Q76L83 1435 aa24.96■■□□□ 1.59
PHGDH-226ENST00000641756 IQGAP3Q86VI3 1631 aa24.96■■□□□ 1.59
PHGDH-226ENST00000641756 ABCA9Q8IUA7 1624 aa24.95■■□□□ 1.58
PHGDH-226ENST00000641756 KDM2AQ9Y2K7 1162 aa24.95■■□□□ 1.58
PHGDH-226ENST00000641756 SPAG9O60271 1321 aaKnown RBP24.95■■□□□ 1.58
PHGDH-226ENST00000641756 UHRF1BP1Q6BDS2 1440 aa24.94■■□□□ 1.58
PHGDH-226ENST00000641756 FANCAO15360 1455 aa24.93■■□□□ 1.58
PHGDH-226ENST00000641756 CNTLNQ9NXG0 1405 aa24.93■■□□□ 1.58
PHGDH-226ENST00000641756 DCAF11Q8TEB1 546 aa24.92■■□□□ 1.58
PHGDH-226ENST00000641756 CCDC144AA2RUR9 1427 aa24.91■■□□□ 1.58
PHGDH-226ENST00000641756 USP47Q96K76 1375 aa24.91■■□□□ 1.58
PHGDH-226ENST00000641756 ZFYVE16Q7Z3T8 1539 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms