RNA–Protein interactions for RNA: ENST00000641712.1

LINC01739-204, Transcript of long intergenic non-protein coding RNA 1739, humanhuman

BASIC

Gene LINC01739, Length 1,005 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01739-204ENST00000641712 DIEXFQ68CQ4 756 aaKnown RBP13.67□□□□□ -0.22
LINC01739-204ENST00000641712 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
LINC01739-204ENST00000641712 GSE1Q14687 1217 aa13.66□□□□□ -0.22
LINC01739-204ENST00000641712 RAPGEF2Q9Y4G8 1499 aa13.64□□□□□ -0.23
LINC01739-204ENST00000641712 PRXQ9BXM0 1461 aa13.63□□□□□ -0.23
LINC01739-204ENST00000641712 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
LINC01739-204ENST00000641712 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
LINC01739-204ENST00000641712 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
LINC01739-204ENST00000641712 OCEL1Q9H607 264 aa13.61□□□□□ -0.23
LINC01739-204ENST00000641712 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
LINC01739-204ENST00000641712 KIF27Q86VH2 1401 aa13.59□□□□□ -0.23
LINC01739-204ENST00000641712 SLAIN1Q8ND83 568 aa13.59□□□□□ -0.23
LINC01739-204ENST00000641712 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
LINC01739-204ENST00000641712 TTBK1Q5TCY1 1321 aaPredicted RBP13.57□□□□□ -0.24
LINC01739-204ENST00000641712 CFTRP13569 1480 aa13.56□□□□□ -0.24
LINC01739-204ENST00000641712 CUX1P39880 1505 aa13.51□□□□□ -0.25
LINC01739-204ENST00000641712 IFNLR1Q8IU57 520 aaPredicted RBP13.51□□□□□ -0.25
LINC01739-204ENST00000641712 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
LINC01739-204ENST00000641712 ST18O60284 1047 aa13.49□□□□□ -0.25
LINC01739-204ENST00000641712 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
LINC01739-204ENST00000641712 PSEN1P49768 467 aa13.46□□□□□ -0.25
LINC01739-204ENST00000641712 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
LINC01739-204ENST00000641712 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
LINC01739-204ENST00000641712 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
LINC01739-204ENST00000641712 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.26
LINC01739-204ENST00000641712 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.45□□□□□ -0.26
LINC01739-204ENST00000641712 MAP3K1Q13233 1512 aa13.44□□□□□ -0.26
LINC01739-204ENST00000641712 CUX2O14529 1486 aa13.44□□□□□ -0.26
LINC01739-204ENST00000641712 MKRN3Q13064 507 aaKnown RBP13.44□□□□□ -0.26
LINC01739-204ENST00000641712 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
LINC01739-204ENST00000641712 CDAN1Q8IWY9 1227 aa13.41□□□□□ -0.26
LINC01739-204ENST00000641712 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
LINC01739-204ENST00000641712 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
LINC01739-204ENST00000641712 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
LINC01739-204ENST00000641712 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
LINC01739-204ENST00000641712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC01739-204ENST00000641712 CIZ1Q9ULV3 898 aaPredicted RBP13.38□□□□□ -0.27
LINC01739-204ENST00000641712 ARHGAP35Q9NRY4 1499 aa13.37□□□□□ -0.27
LINC01739-204ENST00000641712 L3MBTL3Q96JM7 780 aaPredicted RBP13.37□□□□□ -0.27
LINC01739-204ENST00000641712 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
LINC01739-204ENST00000641712 SNPHO15079 494 aa13.36□□□□□ -0.27
LINC01739-204ENST00000641712 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
LINC01739-204ENST00000641712 IGF1RP08069 1367 aa13.35□□□□□ -0.27
LINC01739-204ENST00000641712 TMEM121BQ9BXQ6 578 aaPredicted RBP13.35□□□□□ -0.27
LINC01739-204ENST00000641712 FHAD1B1AJZ9 1412 aa13.33□□□□□ -0.28
LINC01739-204ENST00000641712 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
LINC01739-204ENST00000641712 RANGAP1P46060 587 aaPredicted RBP13.32□□□□□ -0.28
LINC01739-204ENST00000641712 CARMIL1Q5VZK9 1371 aa13.32□□□□□ -0.28
LINC01739-204ENST00000641712 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
LINC01739-204ENST00000641712 CABP2Q9NPB3 220 aa13.29□□□□□ -0.28
LINC01739-204ENST00000641712 TIAM1Q13009 1591 aa13.28□□□□□ -0.28
LINC01739-204ENST00000641712 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
LINC01739-204ENST00000641712 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
LINC01739-204ENST00000641712 EFCAB5A4FU69 1503 aa13.25□□□□□ -0.29
LINC01739-204ENST00000641712 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01739-204ENST00000641712 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
LINC01739-204ENST00000641712 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01739-204ENST00000641712 MYT1Q01538 1121 aa13.23□□□□□ -0.29
LINC01739-204ENST00000641712 TIMELESSQ9UNS1 1208 aa13.23□□□□□ -0.29
LINC01739-204ENST00000641712 DNMBPQ6XZF7 1577 aa13.23□□□□□ -0.29
LINC01739-204ENST00000641712 MARVELD3Q96A59 401 aa13.22□□□□□ -0.29
LINC01739-204ENST00000641712 ABCA10Q8WWZ4 1543 aa13.22□□□□□ -0.29
LINC01739-204ENST00000641712 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
LINC01739-204ENST00000641712 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.29
LINC01739-204ENST00000641712 SETD5Q9C0A6 1442 aa13.21□□□□□ -0.3
LINC01739-204ENST00000641712 CFAP43Q8NDM7 1665 aa13.2□□□□□ -0.3
LINC01739-204ENST00000641712 CUL7Q14999 1698 aa13.19□□□□□ -0.3
LINC01739-204ENST00000641712 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
LINC01739-204ENST00000641712 BOLA1Q9Y3E2 137 aa13.19□□□□□ -0.3
LINC01739-204ENST00000641712 RAB3GAP2Q9H2M9 1393 aa13.18□□□□□ -0.3
LINC01739-204ENST00000641712 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
LINC01739-204ENST00000641712 YTHDC1Q96MU7 727 aaKnown RBP13.17□□□□□ -0.3
LINC01739-204ENST00000641712 FMN1Q68DA7 1419 aa13.14□□□□□ -0.31
LINC01739-204ENST00000641712 TOPBP1Q92547 1522 aa13.14□□□□□ -0.31
LINC01739-204ENST00000641712 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
LINC01739-204ENST00000641712 G3V3G9 751 aa13.12□□□□□ -0.31
LINC01739-204ENST00000641712 EMP3P54852 163 aa13.12□□□□□ -0.31
LINC01739-204ENST00000641712 PCF11O94913 1555 aaKnown RBP13.11□□□□□ -0.31
LINC01739-204ENST00000641712 POLA1P09884 1462 aaPredicted RBP13.11□□□□□ -0.31
LINC01739-204ENST00000641712 PHLDB1Q86UU1 1377 aa13.11□□□□□ -0.31
LINC01739-204ENST00000641712 MAPKBP1O60336 1514 aa13.11□□□□□ -0.31
LINC01739-204ENST00000641712 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
LINC01739-204ENST00000641712 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
LINC01739-204ENST00000641712 HOXB3P14651 431 aaPredicted RBP13.08□□□□□ -0.32
LINC01739-204ENST00000641712 RNF25Q96BH1 459 aaPredicted RBP13.08□□□□□ -0.32
LINC01739-204ENST00000641712 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
LINC01739-204ENST00000641712 POTEB3A0JP26 581 aa13.07□□□□□ -0.32
LINC01739-204ENST00000641712 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
LINC01739-204ENST00000641712 POTEBQ6S5H4 581 aa13.07□□□□□ -0.32
LINC01739-204ENST00000641712 CTTNBP2Q8WZ74 1663 aa13.07□□□□□ -0.32
LINC01739-204ENST00000641712 RIOK3O14730 519 aaKnown RBP13.06□□□□□ -0.32
LINC01739-204ENST00000641712 ITGAEP38570 1179 aa13.06□□□□□ -0.32
LINC01739-204ENST00000641712 RAD54L2Q9Y4B4 1467 aa13.05□□□□□ -0.32
LINC01739-204ENST00000641712 FAM50AQ14320 339 aaKnown RBP13.05□□□□□ -0.32
LINC01739-204ENST00000641712 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
LINC01739-204ENST00000641712 FHOD3Q2V2M9 1422 aa13.05□□□□□ -0.32
LINC01739-204ENST00000641712 WDR97A6NE52 1622 aa13.03□□□□□ -0.32
LINC01739-204ENST00000641712 FAM205CA6NFA0 338 aa13.03□□□□□ -0.32
LINC01739-204ENST00000641712 PDS5BQ9NTI5 1447 aa13.03□□□□□ -0.32
LINC01739-204ENST00000641712 SOX12O15370 315 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms