RNA–Protein interactions for RNA: ENST00000641604.1

CASC19-244, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,251 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-244ENST00000641604 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
CASC19-244ENST00000641604 HS3ST6Q96QI5 342 aa13.53□□□□□ -0.24
CASC19-244ENST00000641604 PDS5BQ9NTI5 1447 aa13.53□□□□□ -0.24
CASC19-244ENST00000641604 FAM205CA6NFA0 338 aa13.52□□□□□ -0.25
CASC19-244ENST00000641604 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
CASC19-244ENST00000641604 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
CASC19-244ENST00000641604 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
CASC19-244ENST00000641604 NESP48681 1621 aa13.5□□□□□ -0.25
CASC19-244ENST00000641604 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CASC19-244ENST00000641604 SOX12O15370 315 aa13.48□□□□□ -0.25
CASC19-244ENST00000641604 RNF25Q96BH1 459 aaPredicted RBP13.47□□□□□ -0.25
CASC19-244ENST00000641604 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
CASC19-244ENST00000641604 DOK7Q18PE1 504 aa13.46□□□□□ -0.25
CASC19-244ENST00000641604 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
CASC19-244ENST00000641604 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
CASC19-244ENST00000641604 VGFO15240 615 aaPredicted RBP13.45□□□□□ -0.26
CASC19-244ENST00000641604 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
CASC19-244ENST00000641604 KRTAP3-3Q9BYR6 98 aa13.45□□□□□ -0.26
CASC19-244ENST00000641604 KRTAP3-2Q9BYR7 98 aa13.45□□□□□ -0.26
CASC19-244ENST00000641604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.44□□□□□ -0.26
CASC19-244ENST00000641604 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
CASC19-244ENST00000641604 MICALL2Q8IY33 904 aa13.43□□□□□ -0.26
CASC19-244ENST00000641604 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
CASC19-244ENST00000641604 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
CASC19-244ENST00000641604 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
CASC19-244ENST00000641604 PHF8Q9UPP1 1060 aa13.37□□□□□ -0.27
CASC19-244ENST00000641604 SMARCA4P51532 1647 aa13.37□□□□□ -0.27
CASC19-244ENST00000641604 ERBB3P21860 1342 aa13.36□□□□□ -0.27
CASC19-244ENST00000641604 BAZ1AQ9NRL2 1556 aaPredicted RBP13.34□□□□□ -0.27
CASC19-244ENST00000641604 ZSWIM6Q9HCJ5 1215 aa13.34□□□□□ -0.27
CASC19-244ENST00000641604 MRC2Q9UBG0 1479 aa13.33□□□□□ -0.28
CASC19-244ENST00000641604 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
CASC19-244ENST00000641604 CADPSQ9ULU8 1353 aa13.31□□□□□ -0.28
CASC19-244ENST00000641604 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
CASC19-244ENST00000641604 NLRP6P59044 892 aa13.29□□□□□ -0.28
CASC19-244ENST00000641604 BCL11BQ9C0K0 894 aaPredicted RBP13.27□□□□□ -0.29
CASC19-244ENST00000641604 PEG3Q9GZU2 1588 aa13.27□□□□□ -0.29
CASC19-244ENST00000641604 WDR62O43379 1518 aa13.26□□□□□ -0.29
CASC19-244ENST00000641604 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
CASC19-244ENST00000641604 GPR153Q6NV75 609 aa13.26□□□□□ -0.29
CASC19-244ENST00000641604 FBXO22Q8NEZ5 403 aa13.25□□□□□ -0.29
CASC19-244ENST00000641604 STK24Q9Y6E0 443 aa13.22□□□□□ -0.29
CASC19-244ENST00000641604 CEP164Q9UPV0 1460 aa13.22□□□□□ -0.29
CASC19-244ENST00000641604 ZNF687Q8N1G0 1237 aa13.2□□□□□ -0.3
CASC19-244ENST00000641604 MFRPQ9BY79 579 aa13.18□□□□□ -0.3
CASC19-244ENST00000641604 STK25O00506 426 aa13.17□□□□□ -0.3
CASC19-244ENST00000641604 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
CASC19-244ENST00000641604 ARSIQ5FYB1 569 aa13.16□□□□□ -0.3
CASC19-244ENST00000641604 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
CASC19-244ENST00000641604 CYB5RLQ6IPT4 315 aa13.11□□□□□ -0.31
CASC19-244ENST00000641604 RIMBP3CA6NJZ7 1639 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 RIMBP3BA6NNM3 1639 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 RIMBP3Q9UFD9 1639 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 KIF3CO14782 793 aa13.1□□□□□ -0.31
CASC19-244ENST00000641604 RNF166Q96A37 237 aaPredicted RBP13.1□□□□□ -0.31
CASC19-244ENST00000641604 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
CASC19-244ENST00000641604 C2orf72A6NCS6 295 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 PKD2Q13563 968 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.327e-7■□□□□ 9.8
CASC19-244ENST00000641604 MYT1LQ9UL68 1186 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 ARHGEF11O15085 1522 aa13.07□□□□□ -0.32
CASC19-244ENST00000641604 RGL2O15211 777 aa13.06□□□□□ -0.32
CASC19-244ENST00000641604 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
CASC19-244ENST00000641604 PTGER2P43116 358 aa13.04□□□□□ -0.32
CASC19-244ENST00000641604 CFTRP13569 1480 aa13□□□□□ -0.33
CASC19-244ENST00000641604 SLC34A2O95436 690 aa13□□□□□ -0.33
CASC19-244ENST00000641604 ANKRD13DQ6ZTN6 518 aa12.99□□□□□ -0.33
CASC19-244ENST00000641604 TMC2Q8TDI7 906 aa12.99□□□□□ -0.33
CASC19-244ENST00000641604 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
CASC19-244ENST00000641604 NUDT7P0C024 238 aa12.97□□□□□ -0.33
CASC19-244ENST00000641604 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
CASC19-244ENST00000641604 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
CASC19-244ENST00000641604 RSF1Q96T23 1441 aaPredicted RBP12.94□□□□□ -0.34
CASC19-244ENST00000641604 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
CASC19-244ENST00000641604 PPP1R37O75864 691 aa12.93□□□□□ -0.34
CASC19-244ENST00000641604 PBX2P40425 430 aa12.93□□□□□ -0.34
CASC19-244ENST00000641604 LHX6Q9UPM6 363 aa12.92□□□□□ -0.34
CASC19-244ENST00000641604 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
CASC19-244ENST00000641604 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
CASC19-244ENST00000641604 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
CASC19-244ENST00000641604 WIZO95785 1651 aa12.85□□□□□ -0.35
CASC19-244ENST00000641604 ZNF608Q9ULD9 1512 aaPredicted RBP12.84□□□□□ -0.35
CASC19-244ENST00000641604 PSDA5PKW4 1024 aaPredicted RBP12.83□□□□□ -0.36
CASC19-244ENST00000641604 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
CASC19-244ENST00000641604 HS6ST3Q8IZP7 471 aa12.82□□□□□ -0.36
CASC19-244ENST00000641604 PTCD2Q8WV60 388 aaKnown RBP12.82□□□□□ -0.36
CASC19-244ENST00000641604 KDM4FA0A1W2PPD8 638 aa12.81□□□□□ -0.36
CASC19-244ENST00000641604 FOXK1P85037 733 aa12.81□□□□□ -0.36
CASC19-244ENST00000641604 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
CASC19-244ENST00000641604 ARHGAP33O14559 1287 aa12.78□□□□□ -0.36
CASC19-244ENST00000641604 EIF4G3O43432 1585 aaKnown RBP12.77□□□□□ -0.36
CASC19-244ENST00000641604 PLPP6Q8IY26 295 aa12.77□□□□□ -0.37
CASC19-244ENST00000641604 CHMP7Q8WUX9 453 aaPredicted RBP12.77□□□□□ -0.37
CASC19-244ENST00000641604 TOPBP1Q92547 1522 aa12.77□□□□□ -0.37
CASC19-244ENST00000641604 TOP2AP11388 1531 aaKnown RBP12.75□□□□□ -0.37
CASC19-244ENST00000641604 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
CASC19-244ENST00000641604 PRDM2Q13029 1718 aa12.74□□□□□ -0.37
CASC19-244ENST00000641604 CHD1O14646 1710 aa12.73□□□□□ -0.37
CASC19-244ENST00000641604 AQRO60306 1485 aaKnown RBP eCLIP12.72□□□□□ -0.37
CASC19-244ENST00000641604 TBC1D12O60347 775 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms