RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PRG4Q92954 1404 aaPredicted RBP23.61■■□□□ 1.37
PHGDH-223ENST00000641597 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
PHGDH-223ENST00000641597 ZNF777Q9ULD5 760 aaPredicted RBP23.6■■□□□ 1.37
PHGDH-223ENST00000641597 EIF4G3O43432 1585 aaKnown RBP23.6■■□□□ 1.37
PHGDH-223ENST00000641597 NBPF8Q3BBV2 869 aa23.59■■□□□ 1.37
PHGDH-223ENST00000641597 PLB1Q6P1J6 1458 aa23.57■■□□□ 1.36
PHGDH-223ENST00000641597 CCDC184Q52MB2 194 aa23.57■■□□□ 1.36
PHGDH-223ENST00000641597 AKNAQ7Z591 1439 aa23.56■■□□□ 1.36
PHGDH-223ENST00000641597 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
PHGDH-223ENST00000641597 SLC4A1APQ9BWU0 796 aaKnown RBP23.55■■□□□ 1.36
PHGDH-223ENST00000641597 EIF4G2P78344 907 aaKnown RBP eCLIP23.54■■□□□ 1.367e-14■■■■■ 63.8
PHGDH-223ENST00000641597 RAPGEF6Q8TEU7 1601 aa23.54■■□□□ 1.36
PHGDH-223ENST00000641597 ANKRD30BQ9BXX2 1392 aa23.52■■□□□ 1.36
PHGDH-223ENST00000641597 HNRNPUQ00839 825 aaKnown RBP eCLIP23.51■■□□□ 1.35
PHGDH-223ENST00000641597 ERCC6Q03468 1493 aa23.51■■□□□ 1.35
PHGDH-223ENST00000641597 CFDP1Q9UEE9 299 aaPredicted RBP23.5■■□□□ 1.35
PHGDH-223ENST00000641597 DNMT1P26358 1616 aaKnown RBP23.5■■□□□ 1.35
PHGDH-223ENST00000641597 CEP170Q5SW79 1584 aa23.49■■□□□ 1.35
PHGDH-223ENST00000641597 CNGB1Q14028 1251 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-223ENST00000641597 CDK11AQ9UQ88 783 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-223ENST00000641597 KIF14Q15058 1648 aa23.47■■□□□ 1.35
PHGDH-223ENST00000641597 IRX6P78412 446 aaPredicted RBP23.47■■□□□ 1.35
PHGDH-223ENST00000641597 ROCK1Q13464 1354 aa23.46■■□□□ 1.35
PHGDH-223ENST00000641597 CAMSAP2Q08AD1 1489 aa23.44■■□□□ 1.34
PHGDH-223ENST00000641597 RPRD2Q5VT52 1461 aaKnown RBP23.44■■□□□ 1.34
PHGDH-223ENST00000641597 ZNF326Q5BKZ1 582 aaKnown RBP23.44■■□□□ 1.34
PHGDH-223ENST00000641597 TEX14Q8IWB6 1497 aa23.43■■□□□ 1.34
PHGDH-223ENST00000641597 TROQ12816 1431 aaPredicted RBP23.43■■□□□ 1.34
PHGDH-223ENST00000641597 NEFLP07196 543 aa23.43■■□□□ 1.34
PHGDH-223ENST00000641597 JPH4Q96JJ6 628 aa23.43■■□□□ 1.34
PHGDH-223ENST00000641597 GPATCH8Q9UKJ3 1502 aaKnown RBP23.41■■□□□ 1.34
PHGDH-223ENST00000641597 CCDC7Q96M83 1385 aa23.4■■□□□ 1.34
PHGDH-223ENST00000641597 PZPP20742 1482 aa23.4■■□□□ 1.34
PHGDH-223ENST00000641597 NCOA1Q15788 1441 aa23.38■■□□□ 1.33
PHGDH-223ENST00000641597 CNTLNQ9NXG0 1405 aa23.38■■□□□ 1.33
PHGDH-223ENST00000641597 SYNJ2O15056 1496 aa23.37■■□□□ 1.33
PHGDH-223ENST00000641597 FAM9BQ8IZU0 186 aa23.37■■□□□ 1.33
PHGDH-223ENST00000641597 KIF7Q2M1P5 1343 aa23.36■■□□□ 1.33
PHGDH-223ENST00000641597 POLR3GLQ9BT43 218 aa23.36■■□□□ 1.33
PHGDH-223ENST00000641597 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
PHGDH-223ENST00000641597 PKD2Q13563 968 aa23.35■■□□□ 1.33
PHGDH-223ENST00000641597 PRKRIP1Q9H875 184 aaPredicted RBP23.35■■□□□ 1.33
PHGDH-223ENST00000641597 SENP3-EIF4A1A0A087X0R7 540 aa23.32■■□□□ 1.32
PHGDH-223ENST00000641597 SPATA31E1Q6ZUB1 1445 aa23.3■■□□□ 1.32
PHGDH-223ENST00000641597 MRS2Q9HD23 443 aa23.3■■□□□ 1.32
PHGDH-223ENST00000641597 PLEKHD1A6NEE1 506 aa23.27■■□□□ 1.32
PHGDH-223ENST00000641597 CARMIL2Q6F5E8 1435 aa23.27■■□□□ 1.32
PHGDH-223ENST00000641597 NUP160Q12769 1436 aa23.26■■□□□ 1.31
PHGDH-223ENST00000641597 HNRNPMP52272 730 aaKnown RBP eCLIP23.26■■□□□ 1.311e-6■■■■□ 22.8
PHGDH-223ENST00000641597 ITSN2Q9NZM3 1697 aa23.25■■□□□ 1.31
PHGDH-223ENST00000641597 ATP10BO94823 1461 aa23.25■■□□□ 1.31
PHGDH-223ENST00000641597 ANKRD50Q9ULJ7 1429 aa23.24■■□□□ 1.31
PHGDH-223ENST00000641597 KIAA1107Q9UPP5 1409 aa23.24■■□□□ 1.31
PHGDH-223ENST00000641597 ANKRD30AQ9BXX3 1397 aa23.23■■□□□ 1.31
PHGDH-223ENST00000641597 ADGBQ8N7X0 1667 aa23.22■■□□□ 1.31
PHGDH-223ENST00000641597 NUP155O75694 1391 aa23.22■■□□□ 1.31
PHGDH-223ENST00000641597 CDC42BPAQ5VT25 1732 aa23.21■■□□□ 1.31
PHGDH-223ENST00000641597 CROCC2H7BZ55 1655 aa23.21■■□□□ 1.31
PHGDH-223ENST00000641597 ADCY10Q96PN6 1610 aa23.21■■□□□ 1.31
PHGDH-223ENST00000641597 KDM2AQ9Y2K7 1162 aa23.21■■□□□ 1.31
PHGDH-223ENST00000641597 USP47Q96K76 1375 aa23.19■■□□□ 1.3
PHGDH-223ENST00000641597 ADGRL2O95490 1459 aa23.19■■□□□ 1.3
PHGDH-223ENST00000641597 BCORL1Q5H9F3 1711 aa23.19■■□□□ 1.3
PHGDH-223ENST00000641597 MBD5Q9P267 1494 aa23.18■■□□□ 1.3
PHGDH-223ENST00000641597 ABCC10Q5T3U5 1492 aa23.18■■□□□ 1.3
PHGDH-223ENST00000641597 C9orf84Q5VXU9 1444 aa23.17■■□□□ 1.3
PHGDH-223ENST00000641597 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
PHGDH-223ENST00000641597 ABCA8O94911 1581 aa23.17■■□□□ 1.3
PHGDH-223ENST00000641597 TSPY4P0CV99 314 aa23.12■■□□□ 1.29
PHGDH-223ENST00000641597 TSPY10P0CW01 314 aa23.12■■□□□ 1.29
PHGDH-223ENST00000641597 DHX29Q7Z478 1369 aaKnown RBP23.12■■□□□ 1.29
PHGDH-223ENST00000641597 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
PHGDH-223ENST00000641597 DCAF11Q8TEB1 546 aa23.09■■□□□ 1.29
PHGDH-223ENST00000641597 CARD11Q9BXL7 1154 aa23.08■■□□□ 1.29
PHGDH-223ENST00000641597 POLR1AO95602 1720 aaPredicted RBP23.08■■□□□ 1.29
PHGDH-223ENST00000641597 PTPRGP23470 1445 aa23.08■■□□□ 1.28
PHGDH-223ENST00000641597 ST20-MTHFSA0A0A6YYL1 179 aa23.05■■□□□ 1.28
PHGDH-223ENST00000641597 KDM5CP41229 1560 aa23.05■■□□□ 1.28
PHGDH-223ENST00000641597 ZBED9Q6R2W3 1325 aa23.04■■□□□ 1.28
PHGDH-223ENST00000641597 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.03■■□□□ 1.285e-16■■□□□ 13.6
PHGDH-223ENST00000641597 RGL3Q3MIN7 710 aa23.02■■□□□ 1.28
PHGDH-223ENST00000641597 B4GALNT3Q6L9W6 998 aa23.02■■□□□ 1.28
PHGDH-223ENST00000641597 SHANK2Q9UPX8 1470 aa23■■□□□ 1.27
PHGDH-223ENST00000641597 SAMD9LQ8IVG5 1584 aa23■■□□□ 1.27
PHGDH-223ENST00000641597 MYT1Q01538 1121 aa23■■□□□ 1.27
PHGDH-223ENST00000641597 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
PHGDH-223ENST00000641597 ANP32EQ9BTT0 268 aa22.97■■□□□ 1.27
PHGDH-223ENST00000641597 RALGAPBQ86X10 1494 aa22.96■■□□□ 1.27
PHGDH-223ENST00000641597 UHRF1BP1Q6BDS2 1440 aa22.95■■□□□ 1.26
PHGDH-223ENST00000641597 ERCC6L2Q5T890 1561 aa22.95■■□□□ 1.26
PHGDH-223ENST00000641597 NBPF1Q3BBV0 1214 aa22.95■■□□□ 1.26
PHGDH-223ENST00000641597 SYCP2Q9BX26 1530 aa22.93■■□□□ 1.26
PHGDH-223ENST00000641597 FAM135AQ9P2D6 1515 aa22.93■■□□□ 1.26
PHGDH-223ENST00000641597 CCDC141Q6ZP82 1450 aa22.92■■□□□ 1.26
PHGDH-223ENST00000641597 TTC37Q6PGP7 1564 aa22.92■■□□□ 1.26
PHGDH-223ENST00000641597 PPP4R2Q9NY27 417 aa22.92■■□□□ 1.26
PHGDH-223ENST00000641597 ROCK2O75116 1388 aaKnown RBP22.91■■□□□ 1.26
PHGDH-223ENST00000641597 MSH5O43196 834 aa22.91■■□□□ 1.26
PHGDH-223ENST00000641597 CHD1O14646 1710 aa22.91■■□□□ 1.26
PHGDH-223ENST00000641597 KDM5DQ9BY66 1539 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms