RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 NLRP6P59044 892 aa9.74□□□□□ -0.85
CASC19-243ENST00000641588 PHF8Q9UPP1 1060 aa9.74□□□□□ -0.85
CASC19-243ENST00000641588 WDR70Q9NW82 654 aa9.72□□□□□ -0.85
CASC19-243ENST00000641588 CDK11AQ9UQ88 783 aaPredicted RBP9.72□□□□□ -0.85
CASC19-243ENST00000641588 HAX1O00165 279 aa9.71□□□□□ -0.86
CASC19-243ENST00000641588 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
CASC19-243ENST00000641588 SALL2Q9Y467 1007 aaPredicted RBP9.71□□□□□ -0.86
CASC19-243ENST00000641588 KCNV2Q8TDN2 545 aa9.68□□□□□ -0.86
CASC19-243ENST00000641588 C19orf67A6NJJ6 358 aa9.67□□□□□ -0.86
CASC19-243ENST00000641588 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
CASC19-243ENST00000641588 MS4A3Q96HJ5 214 aa9.66□□□□□ -0.86
CASC19-243ENST00000641588 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
CASC19-243ENST00000641588 ABCC9O60706 1549 aa9.65□□□□□ -0.86
CASC19-243ENST00000641588 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
CASC19-243ENST00000641588 C11orf95C9JLR9 678 aaPredicted RBP9.64□□□□□ -0.87
CASC19-243ENST00000641588 PKNOX2Q96KN3 472 aa9.64□□□□□ -0.87
CASC19-243ENST00000641588 RB1CC1Q8TDY2 1594 aa9.64□□□□□ -0.87
CASC19-243ENST00000641588 GLIPR1L2Q4G1C9 344 aa9.63□□□□□ -0.87
CASC19-243ENST00000641588 GOLGA2Q08379 1002 aa9.62□□□□□ -0.87
CASC19-243ENST00000641588 RTL5Q5HYW3 569 aaPredicted RBP9.62□□□□□ -0.87
CASC19-243ENST00000641588 NOP58Q9Y2X3 529 aaKnown RBP9.61□□□□□ -0.87
CASC19-243ENST00000641588 TNIKQ9UKE5 1360 aa9.61□□□□□ -0.87
CASC19-243ENST00000641588 CCER2I3L3R5 266 aa9.61□□□□□ -0.87
CASC19-243ENST00000641588 USP35Q9P2H5 1018 aa9.6□□□□□ -0.87
CASC19-243ENST00000641588 NCKAP5LQ9HCH0 1330 aa9.58□□□□□ -0.88
CASC19-243ENST00000641588 MKRN3Q13064 507 aaKnown RBP9.58□□□□□ -0.88
CASC19-243ENST00000641588 RSF1Q96T23 1441 aaPredicted RBP9.58□□□□□ -0.88
CASC19-243ENST00000641588 E2F4Q16254 413 aa9.57□□□□□ -0.88
CASC19-243ENST00000641588 CEP162Q5TB80 1403 aa9.57□□□□□ -0.88
CASC19-243ENST00000641588 TIE1P35590 1138 aa9.56□□□□□ -0.88
CASC19-243ENST00000641588 RSPH6AQ9H0K4 717 aa9.56□□□□□ -0.88
CASC19-243ENST00000641588 TTLL13PA6NNM8 815 aa9.56□□□□□ -0.88
CASC19-243ENST00000641588 ARHGEF1Q92888 912 aaKnown RBP9.56□□□□□ -0.88
CASC19-243ENST00000641588 LARP6Q9BRS8 491 aaKnown RBP9.56□□□□□ -0.88
CASC19-243ENST00000641588 PDE4AP27815 886 aa9.55□□□□□ -0.88
CASC19-243ENST00000641588 EEA1Q15075 1411 aa9.55□□□□□ -0.88
CASC19-243ENST00000641588 WASHC2AQ641Q2 1341 aa9.54□□□□□ -0.88
CASC19-243ENST00000641588 CCDC136Q96JN2 1154 aa9.54□□□□□ -0.88
CASC19-243ENST00000641588 BMP2KQ9NSY1 1161 aaPredicted RBP9.54□□□□□ -0.88
CASC19-243ENST00000641588 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
CASC19-243ENST00000641588 WASHC2CQ9Y4E1 1318 aa9.53□□□□□ -0.88
CASC19-243ENST00000641588 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.88
CASC19-243ENST00000641588 PPP4R2Q9NY27 417 aa9.52□□□□□ -0.88
CASC19-243ENST00000641588 GALR2O43603 387 aaPredicted RBP9.51□□□□□ -0.89
CASC19-243ENST00000641588 MFSD10Q14728 455 aa9.51□□□□□ -0.89
CASC19-243ENST00000641588 LMOD2Q6P5Q4 547 aa9.51□□□□□ -0.89
CASC19-243ENST00000641588 ILDR1Q86SU0 546 aaPredicted RBP9.51□□□□□ -0.89
CASC19-243ENST00000641588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.51□□□□□ -0.897e-8■□□□□ 10.2
CASC19-243ENST00000641588 TRIM35Q9UPQ4 493 aa9.5□□□□□ -0.89
CASC19-243ENST00000641588 DDX27Q96GQ7 796 aaKnown RBP9.49□□□□□ -0.89
CASC19-243ENST00000641588 DHX57Q6P158 1386 aaKnown RBP9.48□□□□□ -0.89
CASC19-243ENST00000641588 ITGAEP38570 1179 aa9.48□□□□□ -0.89
CASC19-243ENST00000641588 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
CASC19-243ENST00000641588 IPO9Q96P70 1041 aaKnown RBP9.48□□□□□ -0.89
CASC19-243ENST00000641588 SEMA3EO15041 775 aa9.47□□□□□ -0.89
CASC19-243ENST00000641588 ANP32AP39687 249 aaKnown RBP9.47□□□□□ -0.89
CASC19-243ENST00000641588 EVX2Q03828 476 aa9.47□□□□□ -0.89
CASC19-243ENST00000641588 PODXL2Q9NZ53 605 aa9.47□□□□□ -0.89
CASC19-243ENST00000641588 PCDH10Q9P2E7 1040 aa9.47□□□□□ -0.89
CASC19-243ENST00000641588 TESPA1A2RU30 521 aaPredicted RBP9.46□□□□□ -0.9
CASC19-243ENST00000641588 TULP1O00294 542 aaPredicted RBP9.45□□□□□ -0.9
CASC19-243ENST00000641588 PPM1GO15355 546 aaPredicted RBP9.45□□□□□ -0.9
CASC19-243ENST00000641588 DPY19L2Q6NUT2 758 aa9.45□□□□□ -0.9
CASC19-243ENST00000641588 TIMELESSQ9UNS1 1208 aa9.44□□□□□ -0.9
CASC19-243ENST00000641588 CAMK2BQ13554 666 aa9.43□□□□□ -0.9
CASC19-243ENST00000641588 ARIH1Q9Y4X5 557 aaPredicted RBP9.43□□□□□ -0.9
CASC19-243ENST00000641588 CLCN6P51797 869 aa9.42□□□□□ -0.9
CASC19-243ENST00000641588 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
CASC19-243ENST00000641588 GPHNQ9NQX3 736 aaPredicted RBP9.41□□□□□ -0.9
CASC19-243ENST00000641588 CUX2O14529 1486 aa9.41□□□□□ -0.9
CASC19-243ENST00000641588 ANP32CO43423 234 aa9.41□□□□□ -0.9
CASC19-243ENST00000641588 FAM43AQ8N2R8 423 aa9.41□□□□□ -0.9
CASC19-243ENST00000641588 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
CASC19-243ENST00000641588 PPP1R15BQ5SWA1 713 aa9.4□□□□□ -0.91
CASC19-243ENST00000641588 MICALL2Q8IY33 904 aa9.4□□□□□ -0.91
CASC19-243ENST00000641588 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
CASC19-243ENST00000641588 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
CASC19-243ENST00000641588 POTEMA6NI47 508 aa9.38□□□□□ -0.91
CASC19-243ENST00000641588 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
CASC19-243ENST00000641588 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
CASC19-243ENST00000641588 KCNH8Q96L42 1107 aa9.38□□□□□ -0.91
CASC19-243ENST00000641588 IRX5P78411 483 aaPredicted RBP9.37□□□□□ -0.91
CASC19-243ENST00000641588 ASTLQ6HA08 431 aaPredicted RBP9.36□□□□□ -0.91
CASC19-243ENST00000641588 DSG2Q14126 1118 aa9.36□□□□□ -0.91
CASC19-243ENST00000641588 ZMYND15Q9H091 742 aa9.36□□□□□ -0.91
CASC19-243ENST00000641588 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
CASC19-243ENST00000641588 SMYD5Q6GMV2 418 aa9.35□□□□□ -0.91
CASC19-243ENST00000641588 OCEL1Q9H607 264 aa9.35□□□□□ -0.91
CASC19-243ENST00000641588 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
CASC19-243ENST00000641588 RRP9O43818 475 aaKnown RBP9.34□□□□□ -0.91
CASC19-243ENST00000641588 NEFMP07197 916 aa9.34□□□□□ -0.91
CASC19-243ENST00000641588 IER5LQ5T953 404 aa9.34□□□□□ -0.91
CASC19-243ENST00000641588 TMC2Q8TDI7 906 aa9.33□□□□□ -0.92
CASC19-243ENST00000641588 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
CASC19-243ENST00000641588 EMILIN3Q9NT22 766 aa9.33□□□□□ -0.92
CASC19-243ENST00000641588 EIF4G1Q04637 1599 aaKnown RBP9.33□□□□□ -0.92
CASC19-243ENST00000641588 BOLA1Q9Y3E2 137 aa9.32□□□□□ -0.92
CASC19-243ENST00000641588 NACADO15069 1562 aa9.32□□□□□ -0.92
CASC19-243ENST00000641588 FOXK1P85037 733 aa9.31□□□□□ -0.92
CASC19-243ENST00000641588 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms