RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
PHGDH-217ENST00000641455 SAMD9Q5K651 1589 aa13.44□□□□□ -0.26
PHGDH-217ENST00000641455 MAGI2Q86UL8 1455 aa13.43□□□□□ -0.26
PHGDH-217ENST00000641455 HECW1Q76N89 1606 aa13.43□□□□□ -0.26
PHGDH-217ENST00000641455 STRCQ7RTU9 1775 aa13.43□□□□□ -0.26
PHGDH-217ENST00000641455 UHRF1BP1Q6BDS2 1440 aa13.42□□□□□ -0.26
PHGDH-217ENST00000641455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.41□□□□□ -0.26
PHGDH-217ENST00000641455 ARHGEF12Q9NZN5 1544 aa13.41□□□□□ -0.26
PHGDH-217ENST00000641455 C9orf84Q5VXU9 1444 aa13.39□□□□□ -0.27
PHGDH-217ENST00000641455 SCAPERQ9BY12 1400 aa13.39□□□□□ -0.27
PHGDH-217ENST00000641455 ATP10AO60312 1499 aa13.38□□□□□ -0.27
PHGDH-217ENST00000641455 MYT1LQ9UL68 1186 aa13.36□□□□□ -0.27
PHGDH-217ENST00000641455 PTPRTO14522 1441 aa13.36□□□□□ -0.27
PHGDH-217ENST00000641455 SETD1BQ9UPS6 1966 aaKnown RBP13.34□□□□□ -0.27
PHGDH-217ENST00000641455 ESF1Q9H501 851 aaKnown RBP13.32□□□□□ -0.28
PHGDH-217ENST00000641455 LTBP4Q8N2S1 1624 aa13.31□□□□□ -0.28
PHGDH-217ENST00000641455 PLCH2O75038 1416 aa13.31□□□□□ -0.28
PHGDH-217ENST00000641455 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
PHGDH-217ENST00000641455 CDK13Q14004 1512 aaKnown RBP13.3□□□□□ -0.28
PHGDH-217ENST00000641455 EFCAB2Q5VUJ9 269 aa13.3□□□□□ -0.28
PHGDH-217ENST00000641455 C3P01024 1663 aa13.29□□□□□ -0.28
PHGDH-217ENST00000641455 UBAP1LF5GYI3 381 aa13.29□□□□□ -0.28
PHGDH-217ENST00000641455 MYO5CQ9NQX4 1742 aa13.29□□□□□ -0.28
PHGDH-217ENST00000641455 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
PHGDH-217ENST00000641455 ZNF518AQ6AHZ1 1483 aa13.28□□□□□ -0.28
PHGDH-217ENST00000641455 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
PHGDH-217ENST00000641455 NCOA1Q15788 1441 aa13.27□□□□□ -0.29
PHGDH-217ENST00000641455 DIP2CQ9Y2E4 1556 aa13.25□□□□□ -0.29
PHGDH-217ENST00000641455 TRAPPC8Q9Y2L5 1435 aa13.25□□□□□ -0.29
PHGDH-217ENST00000641455 AFAP1Q8N556 730 aa13.25□□□□□ -0.29
PHGDH-217ENST00000641455 ARHGAP5Q13017 1502 aa13.24□□□□□ -0.29
PHGDH-217ENST00000641455 ZNF335Q9H4Z2 1342 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-217ENST00000641455 CAMSAP1Q5T5Y3 1602 aa13.23□□□□□ -0.29
PHGDH-217ENST00000641455 KDM5CP41229 1560 aa13.23□□□□□ -0.29
PHGDH-217ENST00000641455 SCAF1Q9H7N4 1312 aaKnown RBP13.22□□□□□ -0.29
PHGDH-217ENST00000641455 ABCA6Q8N139 1617 aa13.22□□□□□ -0.29
PHGDH-217ENST00000641455 REREQ9P2R6 1566 aa13.21□□□□□ -0.29
PHGDH-217ENST00000641455 KIF14Q15058 1648 aa13.21□□□□□ -0.3
PHGDH-217ENST00000641455 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
PHGDH-217ENST00000641455 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-217ENST00000641455 CNTLNQ9NXG0 1405 aa13.19□□□□□ -0.3
PHGDH-217ENST00000641455 AGLP35573 1532 aa13.18□□□□□ -0.3
PHGDH-217ENST00000641455 MED1Q15648 1581 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-217ENST00000641455 MLH3Q9UHC1 1453 aa13.16□□□□□ -0.3
PHGDH-217ENST00000641455 CLIP1P30622 1438 aa13.16□□□□□ -0.3
PHGDH-217ENST00000641455 PIP4K2BP78356 416 aa13.16□□□□□ -0.3
PHGDH-217ENST00000641455 PHF23Q9BUL5 403 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-217ENST00000641455 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
PHGDH-217ENST00000641455 HSPA1LP34931 641 aa13.15□□□□□ -0.3
PHGDH-217ENST00000641455 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-217ENST00000641455 NPATQ14207 1427 aa13.14□□□□□ -0.31
PHGDH-217ENST00000641455 MROH2AA6NES4 1674 aa13.13□□□□□ -0.31
PHGDH-217ENST00000641455 PKD2Q13563 968 aa13.13□□□□□ -0.31
PHGDH-217ENST00000641455 EEA1Q15075 1411 aa13.13□□□□□ -0.31
PHGDH-217ENST00000641455 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
PHGDH-217ENST00000641455 ITSN2Q9NZM3 1697 aa13.12□□□□□ -0.31
PHGDH-217ENST00000641455 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
PHGDH-217ENST00000641455 PPP6R1Q9UPN7 881 aa13.12□□□□□ -0.31
PHGDH-217ENST00000641455 CDC42BPBQ9Y5S2 1711 aa13.12□□□□□ -0.31
PHGDH-217ENST00000641455 MYO3AQ8NEV4 1616 aa13.12□□□□□ -0.31
PHGDH-217ENST00000641455 ABCC1P33527 1531 aa13.12□□□□□ -0.31
PHGDH-217ENST00000641455 EHMT2Q96KQ7 1210 aa13.11□□□□□ -0.31
PHGDH-217ENST00000641455 KIDINS220Q9ULH0 1771 aa13.11□□□□□ -0.31
PHGDH-217ENST00000641455 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
PHGDH-217ENST00000641455 ZNF142P52746 1687 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-217ENST00000641455 CEP170BQ9Y4F5 1589 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-217ENST00000641455 PREX2Q70Z35 1606 aa13.1□□□□□ -0.31
PHGDH-217ENST00000641455 CLTCQ00610 1675 aaKnown RBP13.09□□□□□ -0.31
PHGDH-217ENST00000641455 TOM1O60784 492 aa13.09□□□□□ -0.31
PHGDH-217ENST00000641455 TCOF1Q13428 1488 aaKnown RBP13.08□□□□□ -0.32
PHGDH-217ENST00000641455 ZNF777Q9ULD5 760 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-217ENST00000641455 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
PHGDH-217ENST00000641455 SENP3Q9H4L4 574 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-217ENST00000641455 SPAG9O60271 1321 aaKnown RBP13.05□□□□□ -0.32
PHGDH-217ENST00000641455 PTPRKQ15262 1439 aa13.05□□□□□ -0.32
PHGDH-217ENST00000641455 SAMD9LQ8IVG5 1584 aa13.04□□□□□ -0.32
PHGDH-217ENST00000641455 GGT6Q6P531 493 aa13.04□□□□□ -0.32
PHGDH-217ENST00000641455 LRRIQ1Q96JM4 1722 aa13.04□□□□□ -0.32
PHGDH-217ENST00000641455 ARHGAP35Q9NRY4 1499 aa13.04□□□□□ -0.32
PHGDH-217ENST00000641455 CPS1P31327 1500 aa13.03□□□□□ -0.32
PHGDH-217ENST00000641455 SYCP2Q9BX26 1530 aa13.02□□□□□ -0.33
PHGDH-217ENST00000641455 CDC42BPAQ5VT25 1732 aa13.02□□□□□ -0.33
PHGDH-217ENST00000641455 SHANK2Q9UPX8 1470 aa13.01□□□□□ -0.33
PHGDH-217ENST00000641455 POLR1AO95602 1720 aaPredicted RBP13□□□□□ -0.33
PHGDH-217ENST00000641455 ATP7AQ04656 1500 aa13□□□□□ -0.33
PHGDH-217ENST00000641455 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
PHGDH-217ENST00000641455 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
PHGDH-217ENST00000641455 A2MP01023 1474 aa12.99□□□□□ -0.33
PHGDH-217ENST00000641455 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
PHGDH-217ENST00000641455 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
PHGDH-217ENST00000641455 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
PHGDH-217ENST00000641455 NEURL4Q96JN8 1562 aa12.97□□□□□ -0.33
PHGDH-217ENST00000641455 INO80Q9ULG1 1556 aaPredicted RBP12.95□□□□□ -0.34
PHGDH-217ENST00000641455 TNRQ92752 1358 aa12.94□□□□□ -0.34
PHGDH-217ENST00000641455 ANKLE2Q86XL3 938 aa12.94□□□□□ -0.34
PHGDH-217ENST00000641455 VWDEQ8N2E2 1590 aa12.93□□□□□ -0.34
PHGDH-217ENST00000641455 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
PHGDH-217ENST00000641455 PLEKHH2Q8IVE3 1493 aa12.92□□□□□ -0.34
PHGDH-217ENST00000641455 ALKQ9UM73 1620 aa12.92□□□□□ -0.34
PHGDH-217ENST00000641455 CASKIN1Q8WXD9 1431 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms