RNA–Protein interactions for RNA: ENST00000641261.1

LINC02228-202, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-202ENST00000641261 GPATCH8Q9UKJ3 1502 aaKnown RBP19.29■□□□□ 0.68
LINC02228-202ENST00000641261 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
LINC02228-202ENST00000641261 ATP10BO94823 1461 aa19.28■□□□□ 0.68
LINC02228-202ENST00000641261 PPP1R15AO75807 674 aaPredicted RBP19.27■□□□□ 0.67
LINC02228-202ENST00000641261 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.67
LINC02228-202ENST00000641261 TONSLQ96HA7 1378 aa19.26■□□□□ 0.67
LINC02228-202ENST00000641261 CDC42BPAQ5VT25 1732 aa19.25■□□□□ 0.67
LINC02228-202ENST00000641261 ROCK1Q13464 1354 aa19.25■□□□□ 0.67
LINC02228-202ENST00000641261 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
LINC02228-202ENST00000641261 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
LINC02228-202ENST00000641261 SHROOM2Q13796 1616 aa19.23■□□□□ 0.67
LINC02228-202ENST00000641261 PTPRGP23470 1445 aa19.22■□□□□ 0.67
LINC02228-202ENST00000641261 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
LINC02228-202ENST00000641261 CROCC2H7BZ55 1655 aa19.21■□□□□ 0.67
LINC02228-202ENST00000641261 ABCC10Q5T3U5 1492 aa19.21■□□□□ 0.67
LINC02228-202ENST00000641261 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
LINC02228-202ENST00000641261 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
LINC02228-202ENST00000641261 PLEKHD1A6NEE1 506 aa19.19■□□□□ 0.66
LINC02228-202ENST00000641261 ERCC6L2Q5T890 1561 aa19.19■□□□□ 0.66
LINC02228-202ENST00000641261 MPHOSPH9Q99550 1183 aa19.18■□□□□ 0.66
LINC02228-202ENST00000641261 HIRIP3Q9BW71 556 aaPredicted RBP19.16■□□□□ 0.66
LINC02228-202ENST00000641261 FOXD1Q16676 465 aa19.15■□□□□ 0.66
LINC02228-202ENST00000641261 NCOA1Q15788 1441 aa19.15■□□□□ 0.66
LINC02228-202ENST00000641261 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
LINC02228-202ENST00000641261 CDC42BPBQ9Y5S2 1711 aa19.09■□□□□ 0.65
LINC02228-202ENST00000641261 GTF3C3Q9Y5Q9 886 aa19.09■□□□□ 0.65
LINC02228-202ENST00000641261 DDX10Q13206 875 aaKnown RBP19.08■□□□□ 0.65
LINC02228-202ENST00000641261 PZPP20742 1482 aa19.07■□□□□ 0.64
LINC02228-202ENST00000641261 CLASP1Q7Z460 1538 aa19.07■□□□□ 0.64
LINC02228-202ENST00000641261 ANKRD30BQ9BXX2 1392 aa19.07■□□□□ 0.64
LINC02228-202ENST00000641261 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
LINC02228-202ENST00000641261 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
LINC02228-202ENST00000641261 ABCC2Q92887 1545 aa19.05■□□□□ 0.64
LINC02228-202ENST00000641261 ANKRD30AQ9BXX3 1397 aa19.05■□□□□ 0.64
LINC02228-202ENST00000641261 TTC37Q6PGP7 1564 aa19.05■□□□□ 0.64
LINC02228-202ENST00000641261 SAMD9LQ8IVG5 1584 aa19.05■□□□□ 0.64
LINC02228-202ENST00000641261 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
LINC02228-202ENST00000641261 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
LINC02228-202ENST00000641261 RPRD2Q5VT52 1461 aaKnown RBP19.04■□□□□ 0.64
LINC02228-202ENST00000641261 ANKRD50Q9ULJ7 1429 aa19.02■□□□□ 0.64
LINC02228-202ENST00000641261 L3MBTL2Q969R5 705 aa19.01■□□□□ 0.63
LINC02228-202ENST00000641261 MBD5Q9P267 1494 aa19.01■□□□□ 0.63
LINC02228-202ENST00000641261 ARHGEF5Q12774 1597 aa19.01■□□□□ 0.63
LINC02228-202ENST00000641261 TEX14Q8IWB6 1497 aa19.01■□□□□ 0.63
LINC02228-202ENST00000641261 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
LINC02228-202ENST00000641261 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19■□□□□ 0.63
LINC02228-202ENST00000641261 KCNH8Q96L42 1107 aa18.98■□□□□ 0.63
LINC02228-202ENST00000641261 ZCCHC11Q5TAX3 1644 aaKnown RBP18.96■□□□□ 0.63
LINC02228-202ENST00000641261 MYO5CQ9NQX4 1742 aa18.96■□□□□ 0.63
LINC02228-202ENST00000641261 CCDC141Q6ZP82 1450 aa18.96■□□□□ 0.63
LINC02228-202ENST00000641261 SYCP2Q9BX26 1530 aa18.96■□□□□ 0.62
LINC02228-202ENST00000641261 TSPY4P0CV99 314 aa18.95■□□□□ 0.62
LINC02228-202ENST00000641261 TSPY10P0CW01 314 aa18.95■□□□□ 0.62
LINC02228-202ENST00000641261 ARHGAP5Q13017 1502 aa18.95■□□□□ 0.62
LINC02228-202ENST00000641261 KIF15Q9NS87 1388 aa18.94■□□□□ 0.62
LINC02228-202ENST00000641261 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
LINC02228-202ENST00000641261 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
LINC02228-202ENST00000641261 PKD2Q13563 968 aa18.92■□□□□ 0.62
LINC02228-202ENST00000641261 NBPF8Q3BBV2 869 aa18.91■□□□□ 0.62
LINC02228-202ENST00000641261 NUP155O75694 1391 aa18.9■□□□□ 0.62
LINC02228-202ENST00000641261 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.62
LINC02228-202ENST00000641261 UHRF1BP1LA0JNW5 1464 aa18.89■□□□□ 0.62
LINC02228-202ENST00000641261 EIF4G2P78344 907 aaKnown RBP eCLIP18.86■□□□□ 0.61
LINC02228-202ENST00000641261 WASHC2AQ641Q2 1341 aa18.86■□□□□ 0.61
LINC02228-202ENST00000641261 MAST1Q9Y2H9 1570 aa18.85■□□□□ 0.61
LINC02228-202ENST00000641261 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
LINC02228-202ENST00000641261 RSPH4AQ5TD94 716 aa18.83■□□□□ 0.61
LINC02228-202ENST00000641261 ANP32CO43423 234 aa18.82■□□□□ 0.6
LINC02228-202ENST00000641261 PLCH2O75038 1416 aa18.81■□□□□ 0.6
LINC02228-202ENST00000641261 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
LINC02228-202ENST00000641261 FAM135AQ9P2D6 1515 aa18.8■□□□□ 0.6
LINC02228-202ENST00000641261 PLEKHH2Q8IVE3 1493 aa18.8■□□□□ 0.6
LINC02228-202ENST00000641261 ABCC1P33527 1531 aa18.78■□□□□ 0.6
LINC02228-202ENST00000641261 SPATA31E1Q6ZUB1 1445 aa18.78■□□□□ 0.6
LINC02228-202ENST00000641261 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
LINC02228-202ENST00000641261 UNC13BO14795 1591 aa18.78■□□□□ 0.6
LINC02228-202ENST00000641261 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
LINC02228-202ENST00000641261 CCER2I3L3R5 266 aa18.76■□□□□ 0.59
LINC02228-202ENST00000641261 ZNF326Q5BKZ1 582 aaKnown RBP18.75■□□□□ 0.59
LINC02228-202ENST00000641261 TRAPPC8Q9Y2L5 1435 aa18.73■□□□□ 0.59
LINC02228-202ENST00000641261 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
LINC02228-202ENST00000641261 CCDC7Q96M83 1385 aa18.73■□□□□ 0.59
LINC02228-202ENST00000641261 WDR7Q9Y4E6 1490 aa18.72■□□□□ 0.59
LINC02228-202ENST00000641261 DUOX2Q9NRD8 1548 aa18.71■□□□□ 0.59
LINC02228-202ENST00000641261 CNTLNQ9NXG0 1405 aa18.71■□□□□ 0.59
LINC02228-202ENST00000641261 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
LINC02228-202ENST00000641261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.69■□□□□ 0.58
LINC02228-202ENST00000641261 KDM5CP41229 1560 aa18.69■□□□□ 0.58
LINC02228-202ENST00000641261 UHRF1BP1Q6BDS2 1440 aa18.69■□□□□ 0.58
LINC02228-202ENST00000641261 ARAP3Q8WWN8 1544 aa18.69■□□□□ 0.58
LINC02228-202ENST00000641261 BCORL1Q5H9F3 1711 aa18.68■□□□□ 0.58
LINC02228-202ENST00000641261 KIF7Q2M1P5 1343 aa18.68■□□□□ 0.58
LINC02228-202ENST00000641261 USP47Q96K76 1375 aa18.68■□□□□ 0.58
LINC02228-202ENST00000641261 MAGI2Q86UL8 1455 aa18.68■□□□□ 0.58
LINC02228-202ENST00000641261 ERBINQ96RT1 1412 aa18.67■□□□□ 0.58
LINC02228-202ENST00000641261 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
LINC02228-202ENST00000641261 RALGAPBQ86X10 1494 aa18.67■□□□□ 0.58
LINC02228-202ENST00000641261 ABCA9Q8IUA7 1624 aa18.66■□□□□ 0.58
LINC02228-202ENST00000641261 ZFYVE16Q7Z3T8 1539 aa18.65■□□□□ 0.58
LINC02228-202ENST00000641261 CCDC144AA2RUR9 1427 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms