RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
CASC19-205ENST00000641013 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
CASC19-205ENST00000641013 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
CASC19-205ENST00000641013 SMG6Q86US8 1419 aaKnown RBP10.49□□□□□ -0.73
CASC19-205ENST00000641013 RRP9O43818 475 aaKnown RBP10.48□□□□□ -0.73
CASC19-205ENST00000641013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.73
CASC19-205ENST00000641013 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
CASC19-205ENST00000641013 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.74
CASC19-205ENST00000641013 B4GALNT3Q6L9W6 998 aa10.46□□□□□ -0.74
CASC19-205ENST00000641013 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.74
CASC19-205ENST00000641013 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
CASC19-205ENST00000641013 NCOA2Q15596 1464 aa10.43□□□□□ -0.74
CASC19-205ENST00000641013 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
CASC19-205ENST00000641013 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
CASC19-205ENST00000641013 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
CASC19-205ENST00000641013 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
CASC19-205ENST00000641013 RAPGEF2Q9Y4G8 1499 aa10.41□□□□□ -0.74
CASC19-205ENST00000641013 IRX6P78412 446 aaPredicted RBP10.41□□□□□ -0.74
CASC19-205ENST00000641013 CLCN6P51797 869 aa10.4□□□□□ -0.75
CASC19-205ENST00000641013 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 PRXQ9BXM0 1461 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 CENPJQ9HC77 1338 aaPredicted RBP10.38□□□□□ -0.75
CASC19-205ENST00000641013 CNTLNQ9NXG0 1405 aa10.38□□□□□ -0.75
CASC19-205ENST00000641013 L1TD1Q5T7N2 865 aaKnown RBP10.38□□□□□ -0.75
CASC19-205ENST00000641013 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
CASC19-205ENST00000641013 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
CASC19-205ENST00000641013 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
CASC19-205ENST00000641013 PDE4AP27815 886 aa10.35□□□□□ -0.75
CASC19-205ENST00000641013 HSP90AA2PQ14568 343 aaPredicted RBP10.35□□□□□ -0.75
CASC19-205ENST00000641013 NFKBIBQ15653 356 aa10.35□□□□□ -0.75
CASC19-205ENST00000641013 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
CASC19-205ENST00000641013 LHX8Q68G74 356 aa10.34□□□□□ -0.75
CASC19-205ENST00000641013 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
CASC19-205ENST00000641013 HSP90AA1P07900 732 aaKnown RBP10.33□□□□□ -0.76
CASC19-205ENST00000641013 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
CASC19-205ENST00000641013 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
CASC19-205ENST00000641013 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
CASC19-205ENST00000641013 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
CASC19-205ENST00000641013 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
CASC19-205ENST00000641013 UACAQ9BZF9 1416 aa10.3□□□□□ -0.76
CASC19-205ENST00000641013 TIAM1Q13009 1591 aa10.3□□□□□ -0.76
CASC19-205ENST00000641013 CLCN1P35523 988 aa10.3□□□□□ -0.76
CASC19-205ENST00000641013 ABCA5Q8WWZ7 1642 aa10.29□□□□□ -0.76
CASC19-205ENST00000641013 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
CASC19-205ENST00000641013 MRS2Q9HD23 443 aa10.29□□□□□ -0.76
CASC19-205ENST00000641013 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
CASC19-205ENST00000641013 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
CASC19-205ENST00000641013 CALD1Q05682 793 aaKnown RBP10.27□□□□□ -0.77
CASC19-205ENST00000641013 LRRC9Q6ZRR7 1453 aa10.27□□□□□ -0.77
CASC19-205ENST00000641013 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
CASC19-205ENST00000641013 TPM2P07951 284 aa10.26□□□□□ -0.77
CASC19-205ENST00000641013 PDCL3Q9H2J4 239 aa10.26□□□□□ -0.77
CASC19-205ENST00000641013 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
CASC19-205ENST00000641013 ISY1Q9ULR0 285 aaKnown RBP10.26□□□□□ -0.77
CASC19-205ENST00000641013 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
CASC19-205ENST00000641013 PDE3BQ13370 1112 aa10.25□□□□□ -0.77
CASC19-205ENST00000641013 ZNF579Q8NAF0 562 aaKnown RBP10.25□□□□□ -0.77
CASC19-205ENST00000641013 CCDC18Q5T9S5 1454 aa10.25□□□□□ -0.77
CASC19-205ENST00000641013 KTN1Q86UP2 1357 aaKnown RBP10.25□□□□□ -0.77
CASC19-205ENST00000641013 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
CASC19-205ENST00000641013 POTEIP0CG38 1075 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 MAP7D2Q96T17 732 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 ARHGAP35Q9NRY4 1499 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 INSRP06213 1382 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 CCDC7Q96M83 1385 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 HFM1A2PYH4 1435 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 BIVM-ERCC5R4GMW8 1640 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 TERF1P54274 439 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 KDM5BQ9UGL1 1544 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 NCLP19338 710 aaKnown RBP10.22□□□□□ -0.77
CASC19-205ENST00000641013 NPM2Q86SE8 214 aaKnown RBP10.22□□□□□ -0.77
CASC19-205ENST00000641013 FAM9BQ8IZU0 186 aa10.22□□□□□ -0.77
CASC19-205ENST00000641013 AKNAQ7Z591 1439 aa10.22□□□□□ -0.77
CASC19-205ENST00000641013 HSPA5P11021 654 aaKnown RBP10.21□□□□□ -0.78
CASC19-205ENST00000641013 RRP1P56182 461 aaKnown RBP10.21□□□□□ -0.78
CASC19-205ENST00000641013 POLR1AO95602 1720 aaPredicted RBP10.2□□□□□ -0.78
CASC19-205ENST00000641013 CFAP43Q8NDM7 1665 aa10.2□□□□□ -0.78
CASC19-205ENST00000641013 DCAF11Q8TEB1 546 aa10.19□□□□□ -0.78
CASC19-205ENST00000641013 RRAGDQ9NQL2 400 aaPredicted RBP10.19□□□□□ -0.78
CASC19-205ENST00000641013 ZMYM4Q5VZL5 1548 aa10.19□□□□□ -0.78
CASC19-205ENST00000641013 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
CASC19-205ENST00000641013 NAP1L5Q96NT1 182 aaPredicted RBP10.18□□□□□ -0.78
CASC19-205ENST00000641013 PHLDB1Q86UU1 1377 aa10.18□□□□□ -0.78
CASC19-205ENST00000641013 KIF27Q86VH2 1401 aa10.18□□□□□ -0.78
CASC19-205ENST00000641013 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 HIRIP3Q9BW71 556 aaPredicted RBP10.17□□□□□ -0.78
CASC19-205ENST00000641013 ROCK2O75116 1388 aaKnown RBP10.17□□□□□ -0.78
CASC19-205ENST00000641013 CCDC144AA2RUR9 1427 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 FMN1Q68DA7 1419 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 MIA2Q96PC5 1412 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 FGD1P98174 961 aa10.16□□□□□ -0.78
CASC19-205ENST00000641013 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
CASC19-205ENST00000641013 AQRO60306 1485 aaKnown RBP eCLIP10.16□□□□□ -0.78
CASC19-205ENST00000641013 LRPPRCP42704 1394 aaKnown RBP10.15□□□□□ -0.79
CASC19-205ENST00000641013 FSD2A1L4K1 749 aa10.15□□□□□ -0.79
CASC19-205ENST00000641013 AAMPQ13685 434 aa10.15□□□□□ -0.79
CASC19-205ENST00000641013 BECN1Q14457 450 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms