RNA–Protein interactions for RNA: ENST00000641013.1

CASC19-205, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,411 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-205ENST00000641013 SYNJ1O43426 1573 aa10.5□□□□□ -0.73
CASC19-205ENST00000641013 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
CASC19-205ENST00000641013 FHAD1B1AJZ9 1412 aa10.49□□□□□ -0.73
CASC19-205ENST00000641013 SMG6Q86US8 1419 aaKnown RBP10.49□□□□□ -0.73
CASC19-205ENST00000641013 RRP9O43818 475 aaKnown RBP10.48□□□□□ -0.73
CASC19-205ENST00000641013 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.47□□□□□ -0.73
CASC19-205ENST00000641013 STAG3Q9UJ98 1225 aa10.47□□□□□ -0.73
CASC19-205ENST00000641013 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.74
CASC19-205ENST00000641013 B4GALNT3Q6L9W6 998 aa10.46□□□□□ -0.74
CASC19-205ENST00000641013 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.74
CASC19-205ENST00000641013 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
CASC19-205ENST00000641013 NCOA2Q15596 1464 aa10.43□□□□□ -0.74
CASC19-205ENST00000641013 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
CASC19-205ENST00000641013 PODXL2Q9NZ53 605 aa10.43□□□□□ -0.74
CASC19-205ENST00000641013 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
CASC19-205ENST00000641013 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
CASC19-205ENST00000641013 RAPGEF2Q9Y4G8 1499 aa10.41□□□□□ -0.74
CASC19-205ENST00000641013 IRX6P78412 446 aaPredicted RBP10.41□□□□□ -0.74
CASC19-205ENST00000641013 CLCN6P51797 869 aa10.4□□□□□ -0.75
CASC19-205ENST00000641013 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 TONSLQ96HA7 1378 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 PRXQ9BXM0 1461 aa10.39□□□□□ -0.75
CASC19-205ENST00000641013 CENPJQ9HC77 1338 aaPredicted RBP10.38□□□□□ -0.75
CASC19-205ENST00000641013 CNTLNQ9NXG0 1405 aa10.38□□□□□ -0.75
CASC19-205ENST00000641013 L1TD1Q5T7N2 865 aaKnown RBP10.38□□□□□ -0.75
CASC19-205ENST00000641013 BACH2Q9BYV9 841 aa10.38□□□□□ -0.75
CASC19-205ENST00000641013 KANK4Q5T7N3 995 aaPredicted RBP10.37□□□□□ -0.75
CASC19-205ENST00000641013 SMARCA4P51532 1647 aa10.36□□□□□ -0.75
CASC19-205ENST00000641013 PDE4AP27815 886 aa10.35□□□□□ -0.75
CASC19-205ENST00000641013 HSP90AA2PQ14568 343 aaPredicted RBP10.35□□□□□ -0.75
CASC19-205ENST00000641013 NFKBIBQ15653 356 aa10.35□□□□□ -0.75
CASC19-205ENST00000641013 VSIG10Q8N0Z9 540 aa10.35□□□□□ -0.75
CASC19-205ENST00000641013 LHX8Q68G74 356 aa10.34□□□□□ -0.75
CASC19-205ENST00000641013 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
CASC19-205ENST00000641013 HSP90AA1P07900 732 aaKnown RBP10.33□□□□□ -0.76
CASC19-205ENST00000641013 PRKRIP1Q9H875 184 aaPredicted RBP10.33□□□□□ -0.76
CASC19-205ENST00000641013 FRAT1Q92837 279 aaPredicted RBP10.33□□□□□ -0.76
CASC19-205ENST00000641013 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
CASC19-205ENST00000641013 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
CASC19-205ENST00000641013 LAS1LQ9Y4W2 734 aaKnown RBP10.31□□□□□ -0.76
CASC19-205ENST00000641013 UACAQ9BZF9 1416 aa10.3□□□□□ -0.76
CASC19-205ENST00000641013 TIAM1Q13009 1591 aa10.3□□□□□ -0.76
CASC19-205ENST00000641013 CLCN1P35523 988 aa10.3□□□□□ -0.76
CASC19-205ENST00000641013 ABCA5Q8WWZ7 1642 aa10.29□□□□□ -0.76
CASC19-205ENST00000641013 DCBLD2Q96PD2 775 aa10.29□□□□□ -0.76
CASC19-205ENST00000641013 MRS2Q9HD23 443 aa10.29□□□□□ -0.76
CASC19-205ENST00000641013 EIF4G2P78344 907 aaKnown RBP eCLIP10.28□□□□□ -0.76
CASC19-205ENST00000641013 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
CASC19-205ENST00000641013 CALD1Q05682 793 aaKnown RBP10.27□□□□□ -0.77
CASC19-205ENST00000641013 LRRC9Q6ZRR7 1453 aa10.27□□□□□ -0.77
CASC19-205ENST00000641013 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
CASC19-205ENST00000641013 TPM2P07951 284 aa10.26□□□□□ -0.77
CASC19-205ENST00000641013 PDCL3Q9H2J4 239 aa10.26□□□□□ -0.77
CASC19-205ENST00000641013 PNNQ9H307 717 aaKnown RBP10.26□□□□□ -0.77
CASC19-205ENST00000641013 ISY1Q9ULR0 285 aaKnown RBP10.26□□□□□ -0.77
CASC19-205ENST00000641013 ARID4BQ4LE39 1312 aaPredicted RBP10.25□□□□□ -0.77
CASC19-205ENST00000641013 PDE3BQ13370 1112 aa10.25□□□□□ -0.77
CASC19-205ENST00000641013 ZNF579Q8NAF0 562 aaKnown RBP10.25□□□□□ -0.77
CASC19-205ENST00000641013 CCDC18Q5T9S5 1454 aa10.25□□□□□ -0.77
CASC19-205ENST00000641013 KTN1Q86UP2 1357 aaKnown RBP10.25□□□□□ -0.77
CASC19-205ENST00000641013 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
CASC19-205ENST00000641013 POTEIP0CG38 1075 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 MAP7D2Q96T17 732 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 PLSCR2Q9NRY7 297 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 ARHGAP35Q9NRY4 1499 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 INSRP06213 1382 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 CCDC7Q96M83 1385 aa10.24□□□□□ -0.77
CASC19-205ENST00000641013 HFM1A2PYH4 1435 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 BIVM-ERCC5R4GMW8 1640 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 TERF1P54274 439 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 KDM5BQ9UGL1 1544 aa10.23□□□□□ -0.77
CASC19-205ENST00000641013 NCLP19338 710 aaKnown RBP10.22□□□□□ -0.77
CASC19-205ENST00000641013 NPM2Q86SE8 214 aaKnown RBP10.22□□□□□ -0.77
CASC19-205ENST00000641013 FAM9BQ8IZU0 186 aa10.22□□□□□ -0.77
CASC19-205ENST00000641013 AKNAQ7Z591 1439 aa10.22□□□□□ -0.77
CASC19-205ENST00000641013 HSPA5P11021 654 aaKnown RBP10.21□□□□□ -0.78
CASC19-205ENST00000641013 RRP1P56182 461 aaKnown RBP10.21□□□□□ -0.78
CASC19-205ENST00000641013 POLR1AO95602 1720 aaPredicted RBP10.2□□□□□ -0.78
CASC19-205ENST00000641013 CFAP43Q8NDM7 1665 aa10.2□□□□□ -0.78
CASC19-205ENST00000641013 DCAF11Q8TEB1 546 aa10.19□□□□□ -0.78
CASC19-205ENST00000641013 RRAGDQ9NQL2 400 aaPredicted RBP10.19□□□□□ -0.78
CASC19-205ENST00000641013 ZMYM4Q5VZL5 1548 aa10.19□□□□□ -0.78
CASC19-205ENST00000641013 MTERF4Q7Z6M4 381 aaKnown RBP10.18□□□□□ -0.78
CASC19-205ENST00000641013 NAP1L5Q96NT1 182 aaPredicted RBP10.18□□□□□ -0.78
CASC19-205ENST00000641013 PHLDB1Q86UU1 1377 aa10.18□□□□□ -0.78
CASC19-205ENST00000641013 KIF27Q86VH2 1401 aa10.18□□□□□ -0.78
CASC19-205ENST00000641013 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 HIRIP3Q9BW71 556 aaPredicted RBP10.17□□□□□ -0.78
CASC19-205ENST00000641013 ROCK2O75116 1388 aaKnown RBP10.17□□□□□ -0.78
CASC19-205ENST00000641013 CCDC144AA2RUR9 1427 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 FMN1Q68DA7 1419 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 MIA2Q96PC5 1412 aa10.17□□□□□ -0.78
CASC19-205ENST00000641013 FGD1P98174 961 aa10.16□□□□□ -0.78
CASC19-205ENST00000641013 FAM161AQ3B820 660 aa10.16□□□□□ -0.78
CASC19-205ENST00000641013 AQRO60306 1485 aaKnown RBP eCLIP10.16□□□□□ -0.78
CASC19-205ENST00000641013 LRPPRCP42704 1394 aaKnown RBP10.15□□□□□ -0.79
CASC19-205ENST00000641013 FSD2A1L4K1 749 aa10.15□□□□□ -0.79
CASC19-205ENST00000641013 AAMPQ13685 434 aa10.15□□□□□ -0.79
CASC19-205ENST00000641013 BECN1Q14457 450 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms