RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 KIAA0586Q9BVV6 1533 aa19.56■□□□□ 0.72
GFAP-237ENST00000640552 NEFLP07196 543 aa19.56■□□□□ 0.72
GFAP-237ENST00000640552 HNRNPUQ00839 825 aaKnown RBP eCLIP19.56■□□□□ 0.72
GFAP-237ENST00000640552 HECW1Q76N89 1606 aa19.55■□□□□ 0.72
GFAP-237ENST00000640552 PKD2Q13563 968 aa19.55■□□□□ 0.72
GFAP-237ENST00000640552 SUPT16HQ9Y5B9 1047 aaKnown RBP19.55■□□□□ 0.72
GFAP-237ENST00000640552 CARMIL2Q6F5E8 1435 aa19.55■□□□□ 0.72
GFAP-237ENST00000640552 FAM9BQ8IZU0 186 aa19.54■□□□□ 0.72
GFAP-237ENST00000640552 UGGT2Q9NYU1 1516 aa19.51■□□□□ 0.71
GFAP-237ENST00000640552 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
GFAP-237ENST00000640552 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
GFAP-237ENST00000640552 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
GFAP-237ENST00000640552 NUP153P49790 1475 aaKnown RBP19.48■□□□□ 0.71
GFAP-237ENST00000640552 EIF4G3O43432 1585 aaKnown RBP19.48■□□□□ 0.71
GFAP-237ENST00000640552 DISP1Q96F81 1524 aa19.47■□□□□ 0.71
GFAP-237ENST00000640552 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
GFAP-237ENST00000640552 DAPK1P53355 1430 aa19.44■□□□□ 0.7
GFAP-237ENST00000640552 WDR62O43379 1518 aa19.44■□□□□ 0.7
GFAP-237ENST00000640552 WASHC2AQ641Q2 1341 aa19.44■□□□□ 0.7
GFAP-237ENST00000640552 ABCC5O15440 1437 aa19.43■□□□□ 0.7
GFAP-237ENST00000640552 NUP155O75694 1391 aa19.43■□□□□ 0.7
GFAP-237ENST00000640552 PTPRGP23470 1445 aa19.42■□□□□ 0.7
GFAP-237ENST00000640552 SYNJ2O15056 1496 aa19.42■□□□□ 0.7
GFAP-237ENST00000640552 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
GFAP-237ENST00000640552 C11orf95C9JLR9 678 aaPredicted RBP19.42■□□□□ 0.7
GFAP-237ENST00000640552 MRS2Q9HD23 443 aa19.41■□□□□ 0.7
GFAP-237ENST00000640552 KDM6BO15054 1643 aa19.41■□□□□ 0.7
GFAP-237ENST00000640552 TROQ12816 1431 aaPredicted RBP19.4■□□□□ 0.7
GFAP-237ENST00000640552 KIAA0556O60303 1618 aa19.39■□□□□ 0.7
GFAP-237ENST00000640552 DCAF11Q8TEB1 546 aa19.39■□□□□ 0.69
GFAP-237ENST00000640552 ANKRD30AQ9BXX3 1397 aa19.37■□□□□ 0.69
GFAP-237ENST00000640552 CCDC184Q52MB2 194 aa19.37■□□□□ 0.69
GFAP-237ENST00000640552 MAGI1Q96QZ7 1491 aaPredicted RBP19.36■□□□□ 0.69
GFAP-237ENST00000640552 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
GFAP-237ENST00000640552 CARD11Q9BXL7 1154 aa19.34■□□□□ 0.69
GFAP-237ENST00000640552 RAPGEF6Q8TEU7 1601 aa19.34■□□□□ 0.69
GFAP-237ENST00000640552 CCER2I3L3R5 266 aa19.33■□□□□ 0.68
GFAP-237ENST00000640552 CEP170Q5SW79 1584 aa19.33■□□□□ 0.68
GFAP-237ENST00000640552 CAMSAP2Q08AD1 1489 aa19.31■□□□□ 0.68
GFAP-237ENST00000640552 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
GFAP-237ENST00000640552 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
GFAP-237ENST00000640552 GPATCH8Q9UKJ3 1502 aaKnown RBP19.3■□□□□ 0.68
GFAP-237ENST00000640552 ANKRD30BQ9BXX2 1392 aa19.29■□□□□ 0.68
GFAP-237ENST00000640552 ANKRD50Q9ULJ7 1429 aa19.29■□□□□ 0.68
GFAP-237ENST00000640552 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
GFAP-237ENST00000640552 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
GFAP-237ENST00000640552 KIF14Q15058 1648 aa19.26■□□□□ 0.67
GFAP-237ENST00000640552 ATP10BO94823 1461 aa19.25■□□□□ 0.67
GFAP-237ENST00000640552 KIF15Q9NS87 1388 aa19.25■□□□□ 0.67
GFAP-237ENST00000640552 KIF7Q2M1P5 1343 aa19.25■□□□□ 0.67
GFAP-237ENST00000640552 AKNAQ7Z591 1439 aa19.25■□□□□ 0.67
GFAP-237ENST00000640552 DENND4BO75064 1496 aaPredicted RBP19.24■□□□□ 0.67
GFAP-237ENST00000640552 ROCK1Q13464 1354 aa19.22■□□□□ 0.67
GFAP-237ENST00000640552 PRKRIP1Q9H875 184 aaPredicted RBP19.22■□□□□ 0.67
GFAP-237ENST00000640552 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
GFAP-237ENST00000640552 ST20-MTHFSA0A0A6YYL1 179 aa19.21■□□□□ 0.67
GFAP-237ENST00000640552 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
GFAP-237ENST00000640552 NUP160Q12769 1436 aa19.19■□□□□ 0.66
GFAP-237ENST00000640552 USP47Q96K76 1375 aa19.18■□□□□ 0.66
GFAP-237ENST00000640552 TMC1Q8TDI8 760 aa19.17■□□□□ 0.66
GFAP-237ENST00000640552 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
GFAP-237ENST00000640552 RPRD2Q5VT52 1461 aaKnown RBP19.15■□□□□ 0.66
GFAP-237ENST00000640552 KIAA1107Q9UPP5 1409 aa19.14■□□□□ 0.66
GFAP-237ENST00000640552 CHGAP10645 457 aaKnown RBP19.13■□□□□ 0.65
GFAP-237ENST00000640552 DNMT1P26358 1616 aaKnown RBP19.13■□□□□ 0.65
GFAP-237ENST00000640552 NBPF1Q3BBV0 1214 aa19.12■□□□□ 0.65
GFAP-237ENST00000640552 EFCAB2Q5VUJ9 269 aa19.11■□□□□ 0.65
GFAP-237ENST00000640552 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
GFAP-237ENST00000640552 CNTLNQ9NXG0 1405 aa19.1■□□□□ 0.65
GFAP-237ENST00000640552 PZPP20742 1482 aa19.1■□□□□ 0.65
GFAP-237ENST00000640552 ARHGAP5Q13017 1502 aa19.1■□□□□ 0.65
GFAP-237ENST00000640552 GCC2Q8IWJ2 1684 aa19.1■□□□□ 0.65
GFAP-237ENST00000640552 TSHZ2Q9NRE2 1034 aa19.09■□□□□ 0.65
GFAP-237ENST00000640552 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.65
GFAP-237ENST00000640552 KDM5BQ9UGL1 1544 aa19.07■□□□□ 0.64
GFAP-237ENST00000640552 CCDC144AA2RUR9 1427 aa19.04■□□□□ 0.64
GFAP-237ENST00000640552 SPAG9O60271 1321 aaKnown RBP19.03■□□□□ 0.64
GFAP-237ENST00000640552 NPM1P06748 294 aaKnown RBP eCLIP19.03■□□□□ 0.64
GFAP-237ENST00000640552 KIF3BO15066 747 aa19.02■□□□□ 0.64
GFAP-237ENST00000640552 B4GALNT3Q6L9W6 998 aa19.02■□□□□ 0.64
GFAP-237ENST00000640552 TEX14Q8IWB6 1497 aa19.02■□□□□ 0.63
GFAP-237ENST00000640552 RSPH4AQ5TD94 716 aa19.01■□□□□ 0.63
GFAP-237ENST00000640552 ERCC6L2Q5T890 1561 aa19.01■□□□□ 0.63
GFAP-237ENST00000640552 ITSN2Q9NZM3 1697 aa19■□□□□ 0.63
GFAP-237ENST00000640552 CCDC141Q6ZP82 1450 aa18.97■□□□□ 0.63
GFAP-237ENST00000640552 ABCA8O94911 1581 aa18.97■□□□□ 0.63
GFAP-237ENST00000640552 ABCC10Q5T3U5 1492 aa18.97■□□□□ 0.63
GFAP-237ENST00000640552 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
GFAP-237ENST00000640552 SYCP2Q9BX26 1530 aa18.96■□□□□ 0.63
GFAP-237ENST00000640552 GGT6Q6P531 493 aa18.95■□□□□ 0.62
GFAP-237ENST00000640552 NUTM2DQ5VT03 806 aaPredicted RBP18.92■□□□□ 0.62
GFAP-237ENST00000640552 CHD1O14646 1710 aa18.91■□□□□ 0.62
GFAP-237ENST00000640552 CDC42BPAQ5VT25 1732 aa18.91■□□□□ 0.62
GFAP-237ENST00000640552 MBD5Q9P267 1494 aa18.9■□□□□ 0.62
GFAP-237ENST00000640552 PANK3Q9H999 370 aa18.9■□□□□ 0.62
GFAP-237ENST00000640552 ADGRL2O95490 1459 aa18.89■□□□□ 0.61
GFAP-237ENST00000640552 SPATA31E1Q6ZUB1 1445 aa18.87■□□□□ 0.61
GFAP-237ENST00000640552 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
GFAP-237ENST00000640552 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
GFAP-237ENST00000640552 TMF1P82094 1093 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms