RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 KANK4Q5T7N3 995 aaPredicted RBP8.04□□□□□ -1.12
RTTN-218ENST00000640408 RIMBP3CA6NJZ7 1639 aa8.04□□□□□ -1.12
RTTN-218ENST00000640408 RIMBP3BA6NNM3 1639 aa8.04□□□□□ -1.12
RTTN-218ENST00000640408 RIMBP3Q9UFD9 1639 aa8.04□□□□□ -1.12
RTTN-218ENST00000640408 PLCH2O75038 1416 aa8.04□□□□□ -1.12
RTTN-218ENST00000640408 DENND4BO75064 1496 aaPredicted RBP8.03□□□□□ -1.12
RTTN-218ENST00000640408 ARHGAP5Q13017 1502 aa8.03□□□□□ -1.12
RTTN-218ENST00000640408 NCOA2Q15596 1464 aa8.03□□□□□ -1.12
RTTN-218ENST00000640408 KIF14Q15058 1648 aa8.03□□□□□ -1.12
RTTN-218ENST00000640408 NEO1Q92859 1461 aa8.03□□□□□ -1.12
RTTN-218ENST00000640408 SCAPERQ9BY12 1400 aa8.03□□□□□ -1.12
RTTN-218ENST00000640408 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.02□□□□□ -1.12
RTTN-218ENST00000640408 PPP6R1Q9UPN7 881 aa8.02□□□□□ -1.13
RTTN-218ENST00000640408 TIAM1Q13009 1591 aa8.02□□□□□ -1.13
RTTN-218ENST00000640408 ABCC10Q5T3U5 1492 aa8.02□□□□□ -1.13
RTTN-218ENST00000640408 CHIC2Q9UKJ5 165 aa8.02□□□□□ -1.13
RTTN-218ENST00000640408 MAPKBP1O60336 1514 aa8.01□□□□□ -1.13
RTTN-218ENST00000640408 HDGFP51858 240 aaKnown RBP8.01□□□□□ -1.13
RTTN-218ENST00000640408 HNRNPMP52272 730 aaKnown RBP eCLIP8.01□□□□□ -1.13
RTTN-218ENST00000640408 KIAA1107Q9UPP5 1409 aa8.01□□□□□ -1.13
RTTN-218ENST00000640408 CDK13Q14004 1512 aaKnown RBP8.01□□□□□ -1.13
RTTN-218ENST00000640408 FGD6Q6ZV73 1430 aa8.01□□□□□ -1.13
RTTN-218ENST00000640408 STAG3Q9UJ98 1225 aa8.01□□□□□ -1.13
RTTN-218ENST00000640408 PCF11O94913 1555 aaKnown RBP8.01□□□□□ -1.13
RTTN-218ENST00000640408 FANCAO15360 1455 aa8□□□□□ -1.13
RTTN-218ENST00000640408 AKNAQ7Z591 1439 aa8□□□□□ -1.13
RTTN-218ENST00000640408 ADGRL1O94910 1474 aa7.99□□□□□ -1.13
RTTN-218ENST00000640408 SUPT6HQ7KZ85 1726 aaKnown RBP7.99□□□□□ -1.13
RTTN-218ENST00000640408 KIF3BO15066 747 aa7.98□□□□□ -1.13
RTTN-218ENST00000640408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.98□□□□□ -1.13
RTTN-218ENST00000640408 ERCC6L2Q5T890 1561 aa7.98□□□□□ -1.13
RTTN-218ENST00000640408 RRP7BPQ9NSQ0 103 aa7.97□□□□□ -1.13
RTTN-218ENST00000640408 MAGI3Q5TCQ9 1506 aa7.97□□□□□ -1.13
RTTN-218ENST00000640408 GGT6Q6P531 493 aa7.97□□□□□ -1.13
RTTN-218ENST00000640408 AFAP1Q8N556 730 aa7.97□□□□□ -1.13
RTTN-218ENST00000640408 ARAP3Q8WWN8 1544 aa7.97□□□□□ -1.13
RTTN-218ENST00000640408 DAXXQ9UER7 740 aaPredicted RBP7.96□□□□□ -1.14
RTTN-218ENST00000640408 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.14
RTTN-218ENST00000640408 CCDC141Q6ZP82 1450 aa7.96□□□□□ -1.14
RTTN-218ENST00000640408 GPATCH8Q9UKJ3 1502 aaKnown RBP7.96□□□□□ -1.14
RTTN-218ENST00000640408 SLC4A1APQ9BWU0 796 aaKnown RBP7.95□□□□□ -1.14
RTTN-218ENST00000640408 BCL11AQ9H165 835 aa7.95□□□□□ -1.14
RTTN-218ENST00000640408 WASHC2CQ9Y4E1 1318 aa7.95□□□□□ -1.14
RTTN-218ENST00000640408 MAGI2Q86UL8 1455 aa7.95□□□□□ -1.14
RTTN-218ENST00000640408 CLSPNQ9HAW4 1339 aa7.95□□□□□ -1.14
RTTN-218ENST00000640408 RAPGEF3O95398 923 aa7.95□□□□□ -1.14
RTTN-218ENST00000640408 KIF15Q9NS87 1388 aa7.94□□□□□ -1.14
RTTN-218ENST00000640408 MLECQ14165 292 aa7.94□□□□□ -1.14
RTTN-218ENST00000640408 CFAP74Q9C0B2 1584 aa7.94□□□□□ -1.14
RTTN-218ENST00000640408 RTEL1-TNFRSF6BF6WH68 1400 aa7.93□□□□□ -1.14
RTTN-218ENST00000640408 AEBP2Q6ZN18 517 aaPredicted RBP7.93□□□□□ -1.14
RTTN-218ENST00000640408 GLI2P10070 1586 aa7.93□□□□□ -1.14
RTTN-218ENST00000640408 ROCK1Q13464 1354 aa7.92□□□□□ -1.14
RTTN-218ENST00000640408 C9orf84Q5VXU9 1444 aa7.92□□□□□ -1.14
RTTN-218ENST00000640408 DIEXFQ68CQ4 756 aaKnown RBP7.92□□□□□ -1.14
RTTN-218ENST00000640408 ITSN2Q9NZM3 1697 aa7.92□□□□□ -1.14
RTTN-218ENST00000640408 ADCY10Q96PN6 1610 aa7.92□□□□□ -1.14
RTTN-218ENST00000640408 ZCCHC11Q5TAX3 1644 aaKnown RBP7.91□□□□□ -1.14
RTTN-218ENST00000640408 RRBP1Q9P2E9 1410 aaKnown RBP7.91□□□□□ -1.14
RTTN-218ENST00000640408 SETD5Q9C0A6 1442 aa7.91□□□□□ -1.14
RTTN-218ENST00000640408 NUP155O75694 1391 aa7.91□□□□□ -1.14
RTTN-218ENST00000640408 ZNF644Q9H582 1327 aaPredicted RBP7.91□□□□□ -1.14
RTTN-218ENST00000640408 ANKRD50Q9ULJ7 1429 aa7.9□□□□□ -1.14
RTTN-218ENST00000640408 STAC3Q96MF2 364 aa7.9□□□□□ -1.14
RTTN-218ENST00000640408 CHGAP10645 457 aaKnown RBP7.9□□□□□ -1.14
RTTN-218ENST00000640408 DHX29Q7Z478 1369 aaKnown RBP7.9□□□□□ -1.14
RTTN-218ENST00000640408 BCANQ96GW7 911 aa7.9□□□□□ -1.14
RTTN-218ENST00000640408 SCAF1Q9H7N4 1312 aaKnown RBP7.9□□□□□ -1.15
RTTN-218ENST00000640408 PPP1R15AO75807 674 aaPredicted RBP7.89□□□□□ -1.15
RTTN-218ENST00000640408 CAMSAP2Q08AD1 1489 aa7.89□□□□□ -1.15
RTTN-218ENST00000640408 CNTLNQ9NXG0 1405 aa7.88□□□□□ -1.15
RTTN-218ENST00000640408 CFAP43Q8NDM7 1665 aa7.88□□□□□ -1.15
RTTN-218ENST00000640408 EIF5BO60841 1220 aaKnown RBP7.88□□□□□ -1.15
RTTN-218ENST00000640408 ANP32EQ9BTT0 268 aa7.88□□□□□ -1.15
RTTN-218ENST00000640408 EID1Q9Y6B2 187 aa7.88□□□□□ -1.15
RTTN-218ENST00000640408 DAPK1P53355 1430 aa7.88□□□□□ -1.15
RTTN-218ENST00000640408 SLC24A1O60721 1099 aa7.87□□□□□ -1.15
RTTN-218ENST00000640408 SLC52A1Q9NWF4 448 aa7.87□□□□□ -1.15
RTTN-218ENST00000640408 TIMELESSQ9UNS1 1208 aa7.87□□□□□ -1.15
RTTN-218ENST00000640408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.87□□□□□ -1.15
RTTN-218ENST00000640408 ATP10AO60312 1499 aa7.87□□□□□ -1.15
RTTN-218ENST00000640408 SHANK2Q9UPX8 1470 aa7.87□□□□□ -1.15
RTTN-218ENST00000640408 MLH3Q9UHC1 1453 aa7.87□□□□□ -1.15
RTTN-218ENST00000640408 PLPPR3Q6T4P5 718 aa7.86□□□□□ -1.15
RTTN-218ENST00000640408 ABCA9Q8IUA7 1624 aa7.86□□□□□ -1.15
RTTN-218ENST00000640408 A2MP01023 1474 aa7.86□□□□□ -1.15
RTTN-218ENST00000640408 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
RTTN-218ENST00000640408 ZNF326Q5BKZ1 582 aaKnown RBP7.85□□□□□ -1.15
RTTN-218ENST00000640408 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.85□□□□□ -1.15
RTTN-218ENST00000640408 ABCC5O15440 1437 aa7.85□□□□□ -1.15
RTTN-218ENST00000640408 NCOA1Q15788 1441 aa7.85□□□□□ -1.15
RTTN-218ENST00000640408 TONSLQ96HA7 1378 aa7.84□□□□□ -1.15
RTTN-218ENST00000640408 DIP2BQ9P265 1576 aa7.84□□□□□ -1.15
RTTN-218ENST00000640408 THEMISQ8N1K5 641 aaPredicted RBP7.84□□□□□ -1.15
RTTN-218ENST00000640408 PKD2Q13563 968 aa7.84□□□□□ -1.15
RTTN-218ENST00000640408 HFM1A2PYH4 1435 aa7.84□□□□□ -1.16
RTTN-218ENST00000640408 MYO5CQ9NQX4 1742 aa7.83□□□□□ -1.16
RTTN-218ENST00000640408 TRAPPC8Q9Y2L5 1435 aa7.83□□□□□ -1.16
RTTN-218ENST00000640408 PTPN23Q9H3S7 1636 aa7.83□□□□□ -1.16
RTTN-218ENST00000640408 KDM6BO15054 1643 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 233.3 ms