RNA–Protein interactions for RNA: ENST00000640352.1

CNTN2-231, Transcript of contactin 2, human

TSL 5

Gene CNTN2, Length 4,000 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTN2-231	ENST00000640352	ABCA5	Q8WWZ7	1642 aa		11.99	□□□□□ -0.49
CNTN2-231	ENST00000640352	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.99	□□□□□ -0.49
CNTN2-231	ENST00000640352	PBRM1	Q86U86	1689 aa		11.98	□□□□□ -0.49
CNTN2-231	ENST00000640352	TONSL	Q96HA7	1378 aa		11.98	□□□□□ -0.49
CNTN2-231	ENST00000640352	ADAMTS12	P58397	1594 aa		11.98	□□□□□ -0.49
CNTN2-231	ENST00000640352	CHD1	O14646	1710 aa		11.97	□□□□□ -0.49
CNTN2-231	ENST00000640352	FOXD1	Q16676	465 aa		11.97	□□□□□ -0.49
CNTN2-231	ENST00000640352	IQGAP2	Q13576	1575 aa		11.96	□□□□□ -0.49
CNTN2-231	ENST00000640352	CDK13	Q14004	1512 aa	Known RBP	11.95	□□□□□ -0.5
CNTN2-231	ENST00000640352	UACA	Q9BZF9	1416 aa		11.95	□□□□□ -0.5
CNTN2-231	ENST00000640352	RGL3	Q3MIN7	710 aa		11.95	□□□□□ -0.5
CNTN2-231	ENST00000640352	KIF3B	O15066	747 aa		11.94	□□□□□ -0.5
CNTN2-231	ENST00000640352	ANP32A	P39687	249 aa	Known RBP	11.93	□□□□□ -0.5
CNTN2-231	ENST00000640352	ERCC6L2	Q5T890	1561 aa		11.93	□□□□□ -0.5
CNTN2-231	ENST00000640352	PKNOX2	Q96KN3	472 aa		11.93	□□□□□ -0.5
CNTN2-231	ENST00000640352	KDM2A	Q9Y2K7	1162 aa		11.93	□□□□□ -0.5
CNTN2-231	ENST00000640352	NUP160	Q12769	1436 aa		11.92	□□□□□ -0.5
CNTN2-231	ENST00000640352		A0A0U1RQG5	324 aa	Predicted RBP	11.92	□□□□□ -0.5
CNTN2-231	ENST00000640352	ARHGEF11	O15085	1522 aa		11.92	□□□□□ -0.5
CNTN2-231	ENST00000640352	CUL7	Q14999	1698 aa		11.92	□□□□□ -0.5
CNTN2-231	ENST00000640352	CEP170	Q5SW79	1584 aa		11.91	□□□□□ -0.5
CNTN2-231	ENST00000640352	WDR97	A6NE52	1622 aa		11.91	□□□□□ -0.5
CNTN2-231	ENST00000640352	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.91	□□□□□ -0.5
CNTN2-231	ENST00000640352	PPP1R15A	O75807	674 aa	Predicted RBP	11.9	□□□□□ -0.5
CNTN2-231	ENST00000640352	PLEKHG5	O94827	1062 aa		11.9	□□□□□ -0.5
CNTN2-231	ENST00000640352	SPAG9	O60271	1321 aa	Known RBP	11.9	□□□□□ -0.5
CNTN2-231	ENST00000640352	SETD5	Q9C0A6	1442 aa		11.9	□□□□□ -0.5
CNTN2-231	ENST00000640352	RRBP1	Q9P2E9	1410 aa	Known RBP	11.9	□□□□□ -0.5
CNTN2-231	ENST00000640352	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.89	□□□□□ -0.51
CNTN2-231	ENST00000640352	PHLDB1	Q86UU1	1377 aa		11.89	□□□□□ -0.51
CNTN2-231	ENST00000640352	NPM2	Q86SE8	214 aa	Known RBP	11.89	□□□□□ -0.51
CNTN2-231	ENST00000640352	FAM9B	Q8IZU0	186 aa		11.89	□□□□□ -0.51
CNTN2-231	ENST00000640352	MSH5	O43196	834 aa		11.87	□□□□□ -0.51
CNTN2-231	ENST00000640352	MAPKBP1	O60336	1514 aa		11.84	□□□□□ -0.51
CNTN2-231	ENST00000640352	AEBP2	Q6ZN18	517 aa	Predicted RBP	11.84	□□□□□ -0.51
CNTN2-231	ENST00000640352	B4GALNT3	Q6L9W6	998 aa		11.83	□□□□□ -0.52
CNTN2-231	ENST00000640352	ASXL2	Q76L83	1435 aa		11.83	□□□□□ -0.52
CNTN2-231	ENST00000640352	CCDC18	Q5T9S5	1454 aa		11.82	□□□□□ -0.52
CNTN2-231	ENST00000640352	CCDC184	Q52MB2	194 aa		11.82	□□□□□ -0.52
CNTN2-231	ENST00000640352	CD109	Q6YHK3	1445 aa		11.82	□□□□□ -0.52
CNTN2-231	ENST00000640352	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.82	□□□□□ -0.52
CNTN2-231	ENST00000640352	DISP1	Q96F81	1524 aa		11.82	□□□□□ -0.52
CNTN2-231	ENST00000640352	SCAPER	Q9BY12	1400 aa		11.81	□□□□□ -0.52
CNTN2-231	ENST00000640352	ATP10B	O94823	1461 aa		11.8	□□□□□ -0.52
CNTN2-231	ENST00000640352	CEBPA	P49715	358 aa	Predicted RBP	11.8	□□□□□ -0.52
CNTN2-231	ENST00000640352	CASKIN1	Q8WXD9	1431 aa		11.8	□□□□□ -0.52
CNTN2-231	ENST00000640352	DEK	P35659	375 aa	Known RBP	11.8	□□□□□ -0.52
CNTN2-231	ENST00000640352	WASHC2C	Q9Y4E1	1318 aa		11.8	□□□□□ -0.52
CNTN2-231	ENST00000640352	EPRS	P07814	1512 aa	Known RBP	11.79	□□□□□ -0.52
CNTN2-231	ENST00000640352	TIMELESS	Q9UNS1	1208 aa		11.79	□□□□□ -0.52
CNTN2-231	ENST00000640352	RIMBP3C	A6NJZ7	1639 aa		11.79	□□□□□ -0.52
CNTN2-231	ENST00000640352	RIMBP3B	A6NNM3	1639 aa		11.79	□□□□□ -0.52
CNTN2-231	ENST00000640352	RIMBP3	Q9UFD9	1639 aa		11.79	□□□□□ -0.52
CNTN2-231	ENST00000640352	CCER2	I3L3R5	266 aa		11.78	□□□□□ -0.52
CNTN2-231	ENST00000640352	ARHGAP5	Q13017	1502 aa		11.77	□□□□□ -0.53
CNTN2-231	ENST00000640352	HSPA5	P11021	654 aa	Known RBP	11.76	□□□□□ -0.53
CNTN2-231	ENST00000640352	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
CNTN2-231	ENST00000640352	MRS2	Q9HD23	443 aa		11.76	□□□□□ -0.53
CNTN2-231	ENST00000640352	PKD2	Q13563	968 aa		11.75	□□□□□ -0.53
CNTN2-231	ENST00000640352	VSIG10	Q8N0Z9	540 aa		11.75	□□□□□ -0.53
CNTN2-231	ENST00000640352	NUP153	P49790	1475 aa	Known RBP	11.75	□□□□□ -0.53
CNTN2-231	ENST00000640352	NCOA2	Q15596	1464 aa		11.75	□□□□□ -0.53
CNTN2-231	ENST00000640352	TRO	Q12816	1431 aa	Predicted RBP	11.75	□□□□□ -0.53
CNTN2-231	ENST00000640352	LRRC9	Q6ZRR7	1453 aa		11.74	□□□□□ -0.53
CNTN2-231	ENST00000640352	SALL2	Q9Y467	1007 aa	Predicted RBP	11.74	□□□□□ -0.53
CNTN2-231	ENST00000640352	CLASP1	Q7Z460	1538 aa		11.74	□□□□□ -0.53
CNTN2-231	ENST00000640352	PCF11	O94913	1555 aa	Known RBP	11.74	□□□□□ -0.53
CNTN2-231	ENST00000640352	NUP155	O75694	1391 aa		11.74	□□□□□ -0.53
CNTN2-231	ENST00000640352	SAFB2	Q14151	953 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
CNTN2-231	ENST00000640352	KIAA0556	O60303	1618 aa		11.72	□□□□□ -0.53
CNTN2-231	ENST00000640352	C14orf37	Q86TY3	774 aa		11.71	□□□□□ -0.53
CNTN2-231	ENST00000640352	UGGT2	Q9NYU1	1516 aa		11.71	□□□□□ -0.53
CNTN2-231	ENST00000640352	NOP58	Q9Y2X3	529 aa	Known RBP	11.71	□□□□□ -0.53
CNTN2-231	ENST00000640352	EFCAB5	A4FU69	1503 aa		11.7	□□□□□ -0.54
CNTN2-231	ENST00000640352	WASHC2A	Q641Q2	1341 aa		11.7	□□□□□ -0.54
CNTN2-231	ENST00000640352	PPP4R2	Q9NY27	417 aa		11.7	□□□□□ -0.54
CNTN2-231	ENST00000640352	TIAM1	Q13009	1591 aa		11.69	□□□□□ -0.54
CNTN2-231	ENST00000640352	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.69	□□□□□ -0.54
CNTN2-231	ENST00000640352	FYCO1	Q9BQS8	1478 aa		11.69	□□□□□ -0.54
CNTN2-231	ENST00000640352	C11orf95	C9JLR9	678 aa	Predicted RBP	11.69	□□□□□ -0.54
CNTN2-231	ENST00000640352	CTTNBP2	Q8WZ74	1663 aa		11.68	□□□□□ -0.54
CNTN2-231	ENST00000640352	ANKRD30A	Q9BXX3	1397 aa		11.68	□□□□□ -0.54
CNTN2-231	ENST00000640352	STK26	Q9P289	416 aa		11.67	□□□□□ -0.54
CNTN2-231	ENST00000640352	ABCC2	Q92887	1545 aa		11.67	□□□□□ -0.54
CNTN2-231	ENST00000640352	MYOM3	Q5VTT5	1437 aa		11.66	□□□□□ -0.54
CNTN2-231	ENST00000640352	FGD6	Q6ZV73	1430 aa		11.66	□□□□□ -0.54
CNTN2-231	ENST00000640352	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.66	□□□□□ -0.54
CNTN2-231	ENST00000640352	KIF15	Q9NS87	1388 aa		11.66	□□□□□ -0.54
CNTN2-231	ENST00000640352	NUTM2F	A1L443	756 aa		11.65	□□□□□ -0.54
CNTN2-231	ENST00000640352	TMC1	Q8TDI8	760 aa		11.65	□□□□□ -0.54
CNTN2-231	ENST00000640352	L3MBTL2	Q969R5	705 aa		11.65	□□□□□ -0.54
CNTN2-231	ENST00000640352	MPHOSPH9	Q99550	1183 aa		11.65	□□□□□ -0.54
CNTN2-231	ENST00000640352	DCAF11	Q8TEB1	546 aa		11.65	□□□□□ -0.54
CNTN2-231	ENST00000640352	FANCA	O15360	1455 aa		11.65	□□□□□ -0.55
CNTN2-231	ENST00000640352	WDR7	Q9Y4E6	1490 aa		11.65	□□□□□ -0.55
CNTN2-231	ENST00000640352	PTPRK	Q15262	1439 aa		11.64	□□□□□ -0.55
CNTN2-231	ENST00000640352	ADGRL1	O94910	1474 aa		11.64	□□□□□ -0.55
CNTN2-231	ENST00000640352	HECW1	Q76N89	1606 aa		11.63	□□□□□ -0.55
CNTN2-231	ENST00000640352	PAK3	O75914	559 aa	Predicted RBP	11.63	□□□□□ -0.55
CNTN2-231	ENST00000640352	HSPA2	P54652	639 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms